mm9_v1_chrM_+_11741_11742	34.9129	HOX{A6,A7,B6,B7}.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chr2_+_138104219_138104260	34.8744	HOX{A6,A7,B6,B7}.p2	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chrM_+_2750_2751	32.3413	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_409_428	31.4747	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_3320_3438	30.7582	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_11812_11845	30.6154	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_1550_2087	28.2157	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_136598485_136598597	27.76	HOX{A6,A7,B6,B7}.p2	AK053582|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr9_-_29770699_29770842	27.5152	HOX{A6,A7,B6,B7}.p2	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr8_+_56040211_56040342	26.5081	HOX{A6,A7,B6,B7}.p2	BC043130|Gpm6a|234267|glycoprotein m6a	AK147245|Gpm6a|234267|glycoprotein m6a	AK147280|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_-_87297283_87297318	24.5071	HOX{A6,A7,B6,B7}.p2	BC090626|Nfix|18032|nuclear factor I/X
mm9_v1_chrM_+_1091_1314	23.8768	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_56040445_56040534	23.2115	HOX{A6,A7,B6,B7}.p2	BC029683|Gpm6a|234267|glycoprotein m6a	BC033357|Gpm6a|234267|glycoprotein m6a	AK053538|Gpm6a|234267|glycoprotein m6a
mm9_v1_chrM_+_5322_5396	23.1581	HOX{A6,A7,B6,B7}.p2	AK159262|COX1|17708|cytochrome c oxidase subunit I	AK136262|COX1|17708|cytochrome c oxidase subunit I	AK138996|COX1|17708|cytochrome c oxidase subunit I	AK142003|COX1|17708|cytochrome c oxidase subunit I	AK166684|COX1|17708|cytochrome c oxidase subunit I	AK166798|COX1|17708|cytochrome c oxidase subunit I	AK166978|COX1|17708|cytochrome c oxidase subunit I
mm9_v1_chrM_+_11027_11268	22.1375	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_5398_5404	21.0057	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_5462_5556	19.5439	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_12383_12506	18.6721	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_189821727_189821874	18.4472	HOX{A6,A7,B6,B7}.p2	BC082324|Esrrg|26381|estrogen-related receptor gamma	NM_011935|Esrrg|26381|estrogen-related receptor gamma	AB093266|Esrrg|26381|estrogen-related receptor gamma	AF117254|Esrrg|26381|estrogen-related receptor gamma	AB221580|Esrrg|26381|estrogen-related receptor gamma
mm9_v1_chr3_+_136598184_136598389	18.4221	HOX{A6,A7,B6,B7}.p2	AK218972|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK179617|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK145309|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr8_+_115093942_115094124	18.1618	HOX{A6,A7,B6,B7}.p2	BC034628|Cntnap4|170571|contactin associated protein-like 4	NM_130457|Cntnap4|170571|contactin associated protein-like 4	AK142816|Cntnap4|170571|contactin associated protein-like 4	AK081891|Cntnap4|170571|contactin associated protein-like 4	AK053611|Cntnap4|170571|contactin associated protein-like 4	AK042607|Cntnap4|170571|contactin associated protein-like 4	AK173255|Cntnap4|170571|contactin associated protein-like 4	AF333770|Cntnap4|170571|contactin associated protein-like 4
mm9_v1_chrM_+_14143_14189	18.1508	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_97248556_97248685	18.1281	HOX{A6,A7,B6,B7}.p2	D90173|Nfia|18027|nuclear factor I/A	AK048696|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene	AK139357|Nfia|18027|nuclear factor I/A	NM_001122952|Nfia|18027|nuclear factor I/A	AK051361|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene
mm9_v1_chrM_+_13543_13577	18.0215	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_81073778_81073898	17.88	HOX{A6,A7,B6,B7}.p2	AK034747|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	BC082310|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	NM_172849|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	AK137094|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene
mm9_v1_chr11_+_42234760_42234851	17.8044	HOX{A6,A7,B6,B7}.p2	U14419|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	AK034069|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	GU086167|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr2_+_70312979_70313222	17.7021	HOX{A6,A7,B6,B7}.p2	AK036234|Sp5|64406|trans-acting transcription factor 5	NM_022435|Sp5|64406|trans-acting transcription factor 5	BC116691|Sp5|64406|trans-acting transcription factor 5	BC117505|Sp5|64406|trans-acting transcription factor 5	AF279479|Sp5|64406|trans-acting transcription factor 5
mm9_v1_chr11_+_77744280_77744540	17.4481	HOX{A6,A7,B6,B7}.p2	AK165757|Sez6|20370|seizure related gene 6	BC055345|Sez6|20370|seizure related gene 6	AK220513|Sez6|20370|seizure related gene 6	AB206791|Sez6|20370|seizure related gene 6	AK032277|Sez6|20370|seizure related gene 6	AK147705|Sez6|20370|seizure related gene 6	BC053011|Sez6|20370|seizure related gene 6	NM_021286|Sez6|20370|seizure related gene 6	D29763|Sez6|20370|seizure related gene 6	D64009|Sez6|20370|seizure related gene 6	D64010|Sez6|20370|seizure related gene 6
mm9_v1_chr8_-_70342105_70342226	17.1462	HOX{A6,A7,B6,B7}.p2	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr6_-_13789847_13789902	17.1081	HOX{A6,A7,B6,B7}.p2	BC065154|Gpr85|64450|G protein-coupled receptor 85	NM_145066|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr8_+_56040193_56040201	16.6124	HOX{A6,A7,B6,B7}.p2	AK081877|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_-_3624988_3625048	16.5343	HOX{A6,A7,B6,B7}.p2	AK003002|Pcp2|18545|Purkinje cell protein 2 (L7)	AK160398|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_001129804|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr14_+_122879276_122879283	16.3552	HOX{A6,A7,B6,B7}.p2	AK158319|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr17_-_90487479_90487653	16.3121	HOX{A6,A7,B6,B7}.p2	AK032032|Nrxn1|18189|neurexin I
mm9_v1_chrM_+_3913_4410	16.0967	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_3625251_3625286	16.071	HOX{A6,A7,B6,B7}.p2	M21532|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_008790|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr15_-_8660462_8660476	16.0285	HOX{A6,A7,B6,B7}.p2	AK031831|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK040798|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK049090|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK082736|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75377|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chrM_+_13320_13486	15.7212	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_79296732_79296799	15.606	HOX{A6,A7,B6,B7}.p2	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr2_+_37372112_37372145	14.7665	HOX{A6,A7,B6,B7}.p2	AK141999|Gpr21|338346|G protein-coupled receptor 21	AK048682|Gpr21|338346|G protein-coupled receptor 21	AK139361|Gpr21|338346|G protein-coupled receptor 21	NM_177383|Gpr21|338346|G protein-coupled receptor 21
mm9_v1_chr15_-_48623520_48623540	14.6977	HOX{A6,A7,B6,B7}.p2	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr10_+_90039435_90039495	14.3879	HOX{A6,A7,B6,B7}.p2	AK032211|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177396|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK163750|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK132228|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK019361|Ipw|16353|imprinted gene in the Prader-Willi syndrome region	AK049899|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chrM_+_6139_6178	14.3828	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_3844_3864	14.0981	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_55586431_55586482	13.6692	HOX{A6,A7,B6,B7}.p2	NM_010750|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK043552|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF040945|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF228913|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK032114|Mab21l1|17116|mab-21-like 1 (C. elegans)	BC014750|Mab21l1|17116|mab-21-like 1 (C. elegans)
mm9_v1_chr4_+_15808409_15808487	13.5504	HOX{A6,A7,B6,B7}.p2	AK002635|Calb1|12307|calbindin 1	AK005081|Calb1|12307|calbindin 1	AK005243|Calb1|12307|calbindin 1	AK028050|Calb1|12307|calbindin 1	AK038856|Calb1|12307|calbindin 1	AK048517|Calb1|12307|calbindin 1	AK077499|Calb1|12307|calbindin 1	NM_009788|Calb1|12307|calbindin 1	AK028327|Calb1|12307|calbindin 1	AK078358|Calb1|12307|calbindin 1	M21531|Calb1|12307|calbindin 1	BC016421|Calb1|12307|calbindin 1
mm9_v1_chr13_+_20564928_20564972	13.4531	HOX{A6,A7,B6,B7}.p2	AK053306|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	AK032085|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	BC024727|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	NM_198093|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)
mm9_v1_chrM_+_13998_14016	13.3921	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_56040553_56040581	13.3477	HOX{A6,A7,B6,B7}.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chrM_+_15355_15407	13.2131	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_+_26679649_26679686	12.9424	HOX{A6,A7,B6,B7}.p2	BC075641|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	NM_011416|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK020092|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr6_+_79968948_79969041	12.6987	HOX{A6,A7,B6,B7}.p2	BC037216|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4	AK038656|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr3_+_125106995_125107008	12.6755	HOX{A6,A7,B6,B7}.p2	AF520870|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	AK140992|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	NM_022565|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm9_v1_chr6_-_55631085_55631098	12.633	HOX{A6,A7,B6,B7}.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr15_-_8660442_8660451	12.5789	HOX{A6,A7,B6,B7}.p2	AK084968|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr13_-_16115192_16115259	12.4018	HOX{A6,A7,B6,B7}.p2	AK045681|B230303A05Rik|328191|RIKEN cDNA B230303A05 gene
mm9_v1_chr11_-_41814008_41814185	12.352	HOX{A6,A7,B6,B7}.p2	M86572|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	BC031762|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	M62374|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_008073|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK034338|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr2_-_7002287_7002310	12.2145	HOX{A6,A7,B6,B7}.p2	AK137292|Celf2|14007|CUGBP, Elav-like family member 2	AK164914|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr2_-_7002344_7002370	12.1259	HOX{A6,A7,B6,B7}.p2	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr1_+_179374783_179374796	11.6406	HOX{A6,A7,B6,B7}.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr12_+_30219982_30220081	11.6194	HOX{A6,A7,B6,B7}.p2	AK049624|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr11_-_30000031_30000152	11.2964	HOX{A6,A7,B6,B7}.p2	AK079934|Spnb2|20742|spectrin beta 2
mm9_v1_chr9_-_91255831_91255857	11.2569	HOX{A6,A7,B6,B7}.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr9_+_118387306_118387461	11.1301	HOX{A6,A7,B6,B7}.p2	NM_001164789|Eomes|13813|eomesodermin homolog (Xenopus laevis)	NM_010136|Eomes|13813|eomesodermin homolog (Xenopus laevis)	AB031037|Eomes|13813|eomesodermin homolog (Xenopus laevis)	BC094319|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chrM_+_67_138	11.0755	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_79436564_79436664	10.9861	HOX{A6,A7,B6,B7}.p2	BC048249|Scg2|20254|secretogranin II	BC014717|Scg2|20254|secretogranin II	NM_009129|Scg2|20254|secretogranin II
mm9_v1_chrM_+_12178_12184	10.9135	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_-_13886_13905	10.494	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_-_161765324_161765332	10.1623	HOX{A6,A7,B6,B7}.p2	AK139335|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr2_-_6805937_6806041	10.0662	HOX{A6,A7,B6,B7}.p2	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chrX_-_85360961_85361026	9.85873	HOX{A6,A7,B6,B7}.p2	BC119580|Il1rapl1|331461|interleukin 1 receptor accessory protein-like 1	NM_001160403|Il1rapl1|331461|interleukin 1 receptor accessory protein-like 1	AK081272|Il1rapl1|331461|interleukin 1 receptor accessory protein-like 1
mm9_v1_chr10_-_63552994_63553028	9.83445	HOX{A6,A7,B6,B7}.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chr18_+_69843730_69844096	9.78308	HOX{A6,A7,B6,B7}.p2	AK021032|Tcf4|21413|transcription factor 4	AK047926|Tcf4|21413|transcription factor 4	AK045400|Tcf4|21413|transcription factor 4	AK083152|Tcf4|21413|transcription factor 4	AK039181|Tcf4|21413|transcription factor 4	AK040346|Tcf4|21413|transcription factor 4	AK032345|Tcf4|21413|transcription factor 4
mm9_v1_chr15_+_91991704_91991862	9.67458	HOX{A6,A7,B6,B7}.p2	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chr5_+_19413335_19413335	9.58294	HOX{A6,A7,B6,B7}.p2	AK147530|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_001170745|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_015823|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm9_v1_chr17_+_80706746_80706746	9.39363	HOX{A6,A7,B6,B7}.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr19_-_5797749_5797761	9.26945	HOX{A6,A7,B6,B7}.p2	AK141413|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr8_+_24780132_24780145	9.21309	HOX{A6,A7,B6,B7}.p2	AK140391|Zmat4|320158|zinc finger, matrin type 4	AK140413|Zmat4|320158|zinc finger, matrin type 4	NM_177086|Zmat4|320158|zinc finger, matrin type 4	AK036254|Zmat4|320158|zinc finger, matrin type 4	AK134793|Zmat4|320158|zinc finger, matrin type 4	BC065110|Zmat4|320158|zinc finger, matrin type 4	BC079657|Zmat4|320158|zinc finger, matrin type 4
mm9_v1_chr11_+_29607599_29607721	9.08787	HOX{A6,A7,B6,B7}.p2	AB073672|Rtn4|68585|reticulon 4
mm9_v1_chr4_+_138012860_138012969	8.87729	HOX{A6,A7,B6,B7}.p2	AK021100|Camk2n1|66259|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm9_v1_chr6_-_55631039_55631067	8.80889	HOX{A6,A7,B6,B7}.p2	AK144303|Neurod6|11922|neurogenic differentiation 6	BC087831|Neurod6|11922|neurogenic differentiation 6	U29086|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr15_-_8660479_8660490	8.74565	HOX{A6,A7,B6,B7}.p2	AK045949|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK080879|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chrM_+_7714_7790	8.67613	HOX{A6,A7,B6,B7}.p2	AF093677|ATP6|17705|ATP synthase F0 subunit 6	BC069931|Gm10925|100191075|predicted gene 10925
mm9_v1_chr18_+_23468585_23468619	8.52083	HOX{A6,A7,B6,B7}.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr1_+_145487825_145487990	8.51442	HOX{A6,A7,B6,B7}.p2	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chr5_+_13125413_13125592	8.42277	HOX{A6,A7,B6,B7}.p2	AK166127|LOC100503462|100503462|hypothetical LOC100503462	AK052051|LOC100503462|100503462|hypothetical LOC100503462
mm9_v1_chr2_+_61884596_61884650	8.32488	HOX{A6,A7,B6,B7}.p2	AK043017|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	NM_033552|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AK220501|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	HM149278|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	BC039226|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AB033759|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
mm9_v1_chr3_+_17954324_17954405	8.22113	HOX{A6,A7,B6,B7}.p2	BC053007|Bhlhe22|59058|basic helix-loop-helix family, member e22	NM_021560|Bhlhe22|59058|basic helix-loop-helix family, member e22	AK076228|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr13_-_84204320_84204376	8.0176	HOX{A6,A7,B6,B7}.p2	AK082072|LOC553095|553095|hypothetical LOC553095
mm9_v1_chr5_+_107926763_107926815	7.96049	HOX{A6,A7,B6,B7}.p2	AK043587|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001007574|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK043720|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK164388|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK169666|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001168557|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene
mm9_v1_chr2_+_61642509_61642690	7.95719	HOX{A6,A7,B6,B7}.p2	BC052737|Tbr1|21375|T-box brain gene 1	NM_009322|Tbr1|21375|T-box brain gene 1	AK158835|Tbr1|21375|T-box brain gene 1	BC058399|Tbr1|21375|T-box brain gene 1	U49251|Tbr1|21375|T-box brain gene 1
mm9_v1_chr11_-_79317471_79317554	7.76005	HOX{A6,A7,B6,B7}.p2	BC024757|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr4_+_101180580_101180604	7.71981	HOX{A6,A7,B6,B7}.p2	NM_001164584|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164585|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK030374|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK122293|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr3_+_13946371_13946410	7.60985	HOX{A6,A7,B6,B7}.p2	NM_001163329|Ralyl|76897|RALY RNA binding protein-like	NM_001163330|Ralyl|76897|RALY RNA binding protein-like	AK038465|Ralyl|76897|RALY RNA binding protein-like	BC052358|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr14_-_122138082_122138150	7.58911	HOX{A6,A7,B6,B7}.p2	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr9_-_58049765_58049823	7.57749	HOX{A6,A7,B6,B7}.p2	AK129367|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr4_-_82151180_82151288	7.5565	HOX{A6,A7,B6,B7}.p2	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr3_-_151856766_151856837	7.47003	HOX{A6,A7,B6,B7}.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr1_-_160286359_160286472	7.39813	HOX{A6,A7,B6,B7}.p2	BC067038|Fam5b|240843|family with sequence similarity 5, member B	BC076572|Fam5b|240843|family with sequence similarity 5, member B	NM_207583|Fam5b|240843|family with sequence similarity 5, member B	AK032297|Fam5b|240843|family with sequence similarity 5, member B	AK047824|Fam5b|240843|family with sequence similarity 5, member B	AK122549|Fam5b|240843|family with sequence similarity 5, member B
mm9_v1_chr3_-_143865162_143865359	7.35557	HOX{A6,A7,B6,B7}.p2	BC003488|Lmo4|16911|LIM domain only 4	BC100382|Lmo4|16911|LIM domain only 4	AF102817|Lmo4|16911|LIM domain only 4	AK138278|Lmo4|16911|LIM domain only 4	NM_001161770|Lmo4|16911|LIM domain only 4	NM_001161769|Lmo4|16911|LIM domain only 4
mm9_v1_chr11_+_117623703_117623821	7.31213	HOX{A6,A7,B6,B7}.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr3_-_80606500_80606592	7.30486	HOX{A6,A7,B6,B7}.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr11_-_33893151_33893192	7.21434	HOX{A6,A7,B6,B7}.p2	AK048178|Kcnip1|70357|Kv channel-interacting protein 1	AK081845|Kcnip1|70357|Kv channel-interacting protein 1	DQ148494|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190886|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr3_+_17954500_17954591	7.1965	HOX{A6,A7,B6,B7}.p2	AK047201|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr10_+_101621491_101621538	6.98787	HOX{A6,A7,B6,B7}.p2	NM_001162368|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK015051|4930402I19Rik|73798|RIKEN cDNA 4930402I19 gene
mm9_v1_chr4_+_101180625_101180708	6.98676	HOX{A6,A7,B6,B7}.p2	AK147570|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK147637|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr7_+_97535490_97535508	6.88866	HOX{A6,A7,B6,B7}.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr8_-_47292863_47292905	6.82148	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_174171943_174171964	6.75471	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_119984482_119984512	6.73204	HOX{A6,A7,B6,B7}.p2	AK020023|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr17_-_90436488_90436574	6.68173	HOX{A6,A7,B6,B7}.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr15_+_22966203_22966220	6.5385	HOX{A6,A7,B6,B7}.p2	AK082311|Cdh18|320865|cadherin 18	AK137430|Cdh18|320865|cadherin 18	NM_001081299|Cdh18|320865|cadherin 18
mm9_v1_chr3_-_80606641_80606686	6.51593	HOX{A6,A7,B6,B7}.p2	AK044574|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK134572|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK086614|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK043490|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK141525|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr4_-_82151657_82151695	6.45056	HOX{A6,A7,B6,B7}.p2	AK148573|Nfib|18028|nuclear factor I/B	Y07687|Nfib|18028|nuclear factor I/B	AK047576|Nfib|18028|nuclear factor I/B
mm9_v1_chr17_+_70871444_70871503	6.40725	HOX{A6,A7,B6,B7}.p2	NM_001128180|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK161941|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK163689|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr13_+_83663817_83664004	6.29429	HOX{A6,A7,B6,B7}.p2	AK036940|Mef2c|17260|myocyte enhancer factor 2C	AK077603|Mef2c|17260|myocyte enhancer factor 2C	AK172512|Mef2c|17260|myocyte enhancer factor 2C	AK172537|Mef2c|17260|myocyte enhancer factor 2C	AK047994|Mef2c|17260|myocyte enhancer factor 2C	AK043267|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr12_+_110783786_110783839	6.23793	HOX{A6,A7,B6,B7}.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr7_+_134094045_134094242	6.20033	HOX{A6,A7,B6,B7}.p2	AK034088|Sez6l2|233878|seizure related 6 homolog like 2	AK165738|Sez6l2|233878|seizure related 6 homolog like 2	BC096615|Sez6l2|233878|seizure related 6 homolog like 2	BC011475|Sez6l2|233878|seizure related 6 homolog like 2	NM_144926|Sez6l2|233878|seizure related 6 homolog like 2
mm9_v1_chr4_-_63707964_63707973	6.14543	HOX{A6,A7,B6,B7}.p2	AK085667|Tnc|21923|tenascin C
mm9_v1_chr6_-_87793459_87793650	6.01755	HOX{A6,A7,B6,B7}.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr9_+_37175190_37175276	5.96887	HOX{A6,A7,B6,B7}.p2	AK013637|Hepacam|72927|hepatocyte cell adhesion molecule	NM_175189|Hepacam|72927|hepatocyte cell adhesion molecule	BC139057|Hepacam|72927|hepatocyte cell adhesion molecule	BC139058|Hepacam|72927|hepatocyte cell adhesion molecule	AK081154|Hepacam|72927|hepatocyte cell adhesion molecule	BC082537|Hepacam|72927|hepatocyte cell adhesion molecule
mm9_v1_chr11_-_41813792_41813857	5.91377	HOX{A6,A7,B6,B7}.p2	AK047085|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK136889|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_177408|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233775|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233776|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233777|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233778|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233779|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233780|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233781|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233782|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233783|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233784|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233785|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233786|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233787|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233788|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233789|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233790|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233791|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233792|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233793|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233794|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233795|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233796|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233797|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233798|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233799|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233800|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233801|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233802|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK141129|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK049857|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr2_+_109739389_109739489	5.74075	HOX{A6,A7,B6,B7}.p2	AK078903|Lin7c|22343|lin-7 homolog C (C. elegans)	AK049807|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr15_-_8660729_8660806	5.6809	HOX{A6,A7,B6,B7}.p2	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr11_-_30168153_30168187	5.67769	HOX{A6,A7,B6,B7}.p2	AK137356|Spnb2|20742|spectrin beta 2
mm9_v1_chr14_+_61757271_61757327	5.65384	HOX{A6,A7,B6,B7}.p2	AK160797|Sacs|50720|sacsin	NM_172809|Sacs|50720|sacsin	AK046501|Sacs|50720|sacsin
mm9_v1_chr8_-_47292973_47292977	5.56767	HOX{A6,A7,B6,B7}.p2	AK186988|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm9_v1_chr4_-_35792385_35792444	5.46334	HOX{A6,A7,B6,B7}.p2	BC137866|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC144985|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC145692|Lingo2|242384|leucine rich repeat and Ig domain containing 2	AK045639|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166001|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_175516|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr15_-_81222718_81222746	5.45034	HOX{A6,A7,B6,B7}.p2	AK205921|St13|70356|suppression of tumorigenicity 13
mm9_v1_chr1_+_66368571_66368671	5.4497	HOX{A6,A7,B6,B7}.p2	AK046341|Mtap2|17756|microtubule-associated protein 2	AK086484|Mtap2|17756|microtubule-associated protein 2	M21041|Mtap2|17756|microtubule-associated protein 2	AK141458|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr4_+_104829963_104829965	5.4096	HOX{A6,A7,B6,B7}.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr9_+_113721698_113721717	5.39941	HOX{A6,A7,B6,B7}.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr7_+_98239427_98239516	5.38011	HOX{A6,A7,B6,B7}.p2	AF388675|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr7_-_29678773_29678890	5.37666	HOX{A6,A7,B6,B7}.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr11_-_41995688_41995930	5.22853	HOX{A6,A7,B6,B7}.p2	X61430|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK039496|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	M86566|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr18_+_69753035_69753127	5.22524	HOX{A6,A7,B6,B7}.p2	AK014343|Tcf4|21413|transcription factor 4	U16321|Tcf4|21413|transcription factor 4	AK132140|Tcf4|21413|transcription factor 4	BC014293|Tcf4|21413|transcription factor 4
mm9_v1_chr13_-_29045399_29045574	5.19799	HOX{A6,A7,B6,B7}.p2	AK187111|Sox4|20677|SRY-box containing gene 4	BC060669|Sox4|20677|SRY-box containing gene 4	X70298|Sox4|20677|SRY-box containing gene 4	BC052736|Sox4|20677|SRY-box containing gene 4	NM_009238|Sox4|20677|SRY-box containing gene 4	AK053840|Sox4|20677|SRY-box containing gene 4	AK028989|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr2_+_65458814_65458867	5.15154	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_77541328_77541435	5.13757	HOX{A6,A7,B6,B7}.p2	BC048543|Zfp385b|241494|zinc finger protein 385B	NM_001113399|Zfp385b|241494|zinc finger protein 385B	AK047859|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chrM_-_622_663	5.11585	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_-_105844882_105845009	5.10865	HOX{A6,A7,B6,B7}.p2	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr3_-_146433544_146433656	5.0962	HOX{A6,A7,B6,B7}.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr18_+_23468655_23468725	5.05493	HOX{A6,A7,B6,B7}.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chr8_+_56122680_56122847	5.02425	HOX{A6,A7,B6,B7}.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr14_+_66963139_66963219	5.02381	HOX{A6,A7,B6,B7}.p2	BC014707|Stmn4|56471|stathmin-like 4	BC046752|Stmn4|56471|stathmin-like 4	NM_019675|Stmn4|56471|stathmin-like 4
mm9_v1_chr9_+_34296315_34296391	5.00993	HOX{A6,A7,B6,B7}.p2	NM_001190911|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190912|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190913|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190914|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_026324|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK013621|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AY169782|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK034142|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK079332|Kirrel3|67703|kin of IRRE like 3 (Drosophila)
mm9_v1_chr9_-_40153864_40153891	4.98885	HOX{A6,A7,B6,B7}.p2	BC070451|Gramd1b|235283|GRAM domain containing 1B
mm9_v1_chr8_-_89996089_89996284	4.97375	HOX{A6,A7,B6,B7}.p2	AK161846|Cbln1|12404|cerebellin 1 precursor protein	BC051956|Cbln1|12404|cerebellin 1 precursor protein	BC055730|Cbln1|12404|cerebellin 1 precursor protein	BC132120|Cbln1|12404|cerebellin 1 precursor protein	BC132122|Cbln1|12404|cerebellin 1 precursor protein
mm9_v1_chr8_+_96335202_96335227	4.96312	HOX{A6,A7,B6,B7}.p2	M36778|Gnao1|14681|guanine nucleotide binding protein, alpha O	M36777|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr15_-_37389073_37389150	4.95225	HOX{A6,A7,B6,B7}.p2	BC026979|Ncald|52589|neurocalcin delta	AK167313|Ncald|52589|neurocalcin delta	AK034031|Ncald|52589|neurocalcin delta	NM_001170867|Ncald|52589|neurocalcin delta	NM_001170868|Ncald|52589|neurocalcin delta
mm9_v1_chr14_+_14286471_14286627	4.94996	HOX{A6,A7,B6,B7}.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr10_+_69487700_69487703	4.89734	HOX{A6,A7,B6,B7}.p2	AK033919|Ank3|11735|ankyrin 3, epithelial	AK036171|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr5_-_124053691_124053818	4.89681	HOX{A6,A7,B6,B7}.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr2_+_70400179_70400352	4.88694	HOX{A6,A7,B6,B7}.p2	AK054554|Gad1|14415|glutamic acid decarboxylase 1	NM_008077|Gad1|14415|glutamic acid decarboxylase 1	AK148497|Gad1|14415|glutamic acid decarboxylase 1	AK160868|Gad1|14415|glutamic acid decarboxylase 1	AK136801|Gad1|14415|glutamic acid decarboxylase 1	BC027059|Gad1|14415|glutamic acid decarboxylase 1	AF326547|Gad1|14415|glutamic acid decarboxylase 1	AF326548|Gad1|14415|glutamic acid decarboxylase 1	Z49976|Gad1|14415|glutamic acid decarboxylase 1
mm9_v1_chr6_-_138371302_138371390	4.88422	HOX{A6,A7,B6,B7}.p2	BC057086|Lmo3|109593|LIM domain only 3
mm9_v1_chr19_+_8665743_8665780	4.88297	HOX{A6,A7,B6,B7}.p2	NM_001164634|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	NM_031194|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK031962|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8
mm9_v1_chr10_+_96942181_96942256	4.87764	HOX{A6,A7,B6,B7}.p2	X53929|Dcn|13179|decorin	AK135287|Dcn|13179|decorin	AK145905|Dcn|13179|decorin	AK161788|Dcn|13179|decorin	AK165408|Dcn|13179|decorin
mm9_v1_chr19_+_4711220_4711230	4.82114	HOX{A6,A7,B6,B7}.p2	BC079860|Spnb3|20743|spectrin beta 3	NM_021287|Spnb3|20743|spectrin beta 3
mm9_v1_chr6_+_53523365_53523387	4.78722	HOX{A6,A7,B6,B7}.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr15_-_8660393_8660418	4.716	HOX{A6,A7,B6,B7}.p2	BC028638|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC066154|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK045716|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr2_-_84265422_84265424	4.70595	HOX{A6,A7,B6,B7}.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chrX_-_163645313_163645419	4.69527	HOX{A6,A7,B6,B7}.p2	AK205579|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr11_-_33103458_33103587	4.69239	HOX{A6,A7,B6,B7}.p2	AJ223801|Tlx3|27140|T-cell leukemia, homeobox 3	BC141308|Tlx3|27140|T-cell leukemia, homeobox 3	BC145631|Tlx3|27140|T-cell leukemia, homeobox 3	AK141870|Tlx3|27140|T-cell leukemia, homeobox 3	NM_019916|Tlx3|27140|T-cell leukemia, homeobox 3
mm9_v1_chr11_-_51414597_51414704	4.65371	HOX{A6,A7,B6,B7}.p2	AK193201|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK196074|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK186800|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr16_-_42340613_42340763	4.64209	HOX{A6,A7,B6,B7}.p2	AK031908|Gap43|14432|growth associated protein 43	BC080758|Gap43|14432|growth associated protein 43	BC028288|Gap43|14432|growth associated protein 43	NM_008083|Gap43|14432|growth associated protein 43
mm9_v1_chr2_-_42508486_42508592	4.60569	HOX{A6,A7,B6,B7}.p2	BC064765|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	AK080989|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	AK039425|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr16_-_88290458_88290613	4.58877	HOX{A6,A7,B6,B7}.p2	AK044420|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK044250|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK043737|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK048634|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK043542|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK133667|Grik1|14805|glutamate receptor, ionotropic, kainate 1	X66118|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK042635|Grik1|14805|glutamate receptor, ionotropic, kainate 1	NM_010348|Grik1|14805|glutamate receptor, ionotropic, kainate 1	NM_146072|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK046122|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK148296|Grik1|14805|glutamate receptor, ionotropic, kainate 1
mm9_v1_chr12_+_110800212_110800261	4.58231	HOX{A6,A7,B6,B7}.p2	AK018142|Meg3|17263|maternally expressed 3
mm9_v1_chr2_-_170232008_170232013	4.57017	HOX{A6,A7,B6,B7}.p2	AK008957|Bcas1|76960|breast carcinoma amplified sequence 1	AK031825|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr7_+_62090867_62091039	4.56177	HOX{A6,A7,B6,B7}.p2	AK082126|Luzp2|233271|leucine zipper protein 2	AK032204|Luzp2|233271|leucine zipper protein 2	AK034240|Luzp2|233271|leucine zipper protein 2	BC075646|Luzp2|233271|leucine zipper protein 2	AK034077|Luzp2|233271|leucine zipper protein 2
mm9_v1_chr9_-_52484889_52484906	4.56013	HOX{A6,A7,B6,B7}.p2	AK053489|AI593442|330941|expressed sequence AI593442
mm9_v1_chr6_+_104443037_104443047	4.53569	HOX{A6,A7,B6,B7}.p2	BC076594|Cntn6|53870|contactin 6	NM_017383|Cntn6|53870|contactin 6
mm9_v1_chr2_+_21289168_21289199	4.53392	HOX{A6,A7,B6,B7}.p2	AK083234|Gpr158|241263|G protein-coupled receptor 158	AK086256|Gpr158|241263|G protein-coupled receptor 158	NM_001004761|Gpr158|241263|G protein-coupled receptor 158	AK030530|Gpr158|241263|G protein-coupled receptor 158
mm9_v1_chr4_+_97444494_97444517	4.51031	HOX{A6,A7,B6,B7}.p2	AK052204|Nfia|18027|nuclear factor I/A
mm9_v1_chr1_-_166368439_166368560	4.50318	HOX{A6,A7,B6,B7}.p2	EF437334|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr12_+_30213224_30213265	4.49929	HOX{A6,A7,B6,B7}.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr19_-_5797068_5797184	4.45548	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrM_+_9875_9905	4.45161	HOX{A6,A7,B6,B7}.p2	AK140187|ND4L|17720|NADH dehydrogenase subunit 4L	AK157367|ND4L|17720|NADH dehydrogenase subunit 4L	AK144853|ND4L|17720|NADH dehydrogenase subunit 4L	AK153747|ND4L|17720|NADH dehydrogenase subunit 4L
mm9_v1_chr3_+_28162135_28162218	4.45032	HOX{A6,A7,B6,B7}.p2	BC050866|Tnik|665113|TRAF2 and NCK interacting kinase	BC050868|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163007|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163008|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163009|Tnik|665113|TRAF2 and NCK interacting kinase	NM_026910|Tnik|665113|TRAF2 and NCK interacting kinase	AK041777|Tnik|665113|TRAF2 and NCK interacting kinase	AK133568|Tnik|665113|TRAF2 and NCK interacting kinase	AK039113|Tnik|665113|TRAF2 and NCK interacting kinase
mm9_v1_chr12_-_84828657_84828685	4.44503	HOX{A6,A7,B6,B7}.p2	AF362750|Dpf3|70127|D4, zinc and double PHD fingers, family 3	FJ151218|Dpf3|70127|D4, zinc and double PHD fingers, family 3	NM_058212|Dpf3|70127|D4, zinc and double PHD fingers, family 3	AK039011|Dpf3|70127|D4, zinc and double PHD fingers, family 3	AK032649|Dpf3|70127|D4, zinc and double PHD fingers, family 3	AK012970|Dpf3|70127|D4, zinc and double PHD fingers, family 3
mm9_v1_chr3_-_80606598_80606626	4.43235	HOX{A6,A7,B6,B7}.p2	AK045738|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr1_-_64167952_64168022	4.38405	HOX{A6,A7,B6,B7}.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr11_-_42134548_42134554	4.36368	HOX{A6,A7,B6,B7}.p2	AK135145|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	AK137331|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	NM_001099641|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	NM_008068|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr19_+_4711207_4711210	4.33648	HOX{A6,A7,B6,B7}.p2	AK147671|Spnb3|20743|spectrin beta 3
mm9_v1_chr4_+_101927543_101927649	4.25908	HOX{A6,A7,B6,B7}.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr9_-_58050091_58050164	4.23846	HOX{A6,A7,B6,B7}.p2	NM_001161536|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	NM_177193|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	NM_001161539|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chrM_+_9458_9465	4.22004	HOX{A6,A7,B6,B7}.p2	AK139029|ND3|17718|NADH dehydrogenase subunit 3
mm9_v1_chr5_-_122907269_122907331	4.16467	HOX{A6,A7,B6,B7}.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr10_-_108447894_108447956	4.11042	HOX{A6,A7,B6,B7}.p2	D37792|Syt1|20979|synaptotagmin I	AK164153|Syt1|20979|synaptotagmin I	AK018163|Syt1|20979|synaptotagmin I
mm9_v1_chr9_+_120868808_120869094	4.07474	HOX{A6,A7,B6,B7}.p2	AK208830|Ctnnb1|12387|catenin (cadherin associated protein), beta 1	AK209437|Ctnnb1|12387|catenin (cadherin associated protein), beta 1	AK209047|Ctnnb1|12387|catenin (cadherin associated protein), beta 1
mm9_v1_chr11_+_94871643_94871672	4.04944	HOX{A6,A7,B6,B7}.p2	AK044765|Samd14|217125|sterile alpha motif domain containing 14	BC034054|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr3_-_151856716_151856729	4.04735	HOX{A6,A7,B6,B7}.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr16_+_7409879_7410026	4.03784	HOX{A6,A7,B6,B7}.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr1_+_148342795_148342819	4.03487	HOX{A6,A7,B6,B7}.p2	AK046878|Fam5c|215378|family with sequence similarity 5, member C	NM_153539|Fam5c|215378|family with sequence similarity 5, member C	BC099956|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr5_+_72091188_72091254	4.01701	HOX{A6,A7,B6,B7}.p2	BC157920|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	BC130258|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	NM_008069|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm9_v1_chr8_-_89996474_89996540	3.98922	HOX{A6,A7,B6,B7}.p2	AK158818|Cbln1|12404|cerebellin 1 precursor protein	NM_019626|Cbln1|12404|cerebellin 1 precursor protein	AK158885|Cbln1|12404|cerebellin 1 precursor protein
mm9_v1_chr9_-_58049842_58049944	3.98687	HOX{A6,A7,B6,B7}.p2	EU497918|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	BC059068|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr18_-_31606908_31607087	3.9863	HOX{A6,A7,B6,B7}.p2	BC052738|Syt4|20983|synaptotagmin IV	BC058208|Syt4|20983|synaptotagmin IV	AK050515|Syt4|20983|synaptotagmin IV	AK220264|Syt4|20983|synaptotagmin IV	AK148681|Syt4|20983|synaptotagmin IV	AK043985|Syt4|20983|synaptotagmin IV	AK083960|Syt4|20983|synaptotagmin IV	AK032106|Syt4|20983|synaptotagmin IV	NM_009308|Syt4|20983|synaptotagmin IV
mm9_v1_chr1_-_156731538_156731628	3.98256	HOX{A6,A7,B6,B7}.p2	AK171983|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm9_v1_chr12_+_101444303_101444345	3.95927	HOX{A6,A7,B6,B7}.p2	AK180928|Calm1|12313|calmodulin 1
mm9_v1_chr7_+_107789414_107789679	3.93105	HOX{A6,A7,B6,B7}.p2	AK191812|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr2_+_174171525_174171529	3.89785	HOX{A6,A7,B6,B7}.p2	AK187312|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK215851|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr11_+_98626169_98626302	3.87125	HOX{A6,A7,B6,B7}.p2	AK165172|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr18_-_15562126_15562266	3.86278	HOX{A6,A7,B6,B7}.p2	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr4_+_97444563_97444661	3.85804	HOX{A6,A7,B6,B7}.p2	D90176|Nfia|18027|nuclear factor I/A	Y07690|Nfia|18027|nuclear factor I/A	Y07691|Nfia|18027|nuclear factor I/A	BC122878|Nfia|18027|nuclear factor I/A	BC122880|Nfia|18027|nuclear factor I/A	AF326553|Nfia|18027|nuclear factor I/A	AF326554|Nfia|18027|nuclear factor I/A	U57633|Nfia|18027|nuclear factor I/A
mm9_v1_chr8_-_34858230_34858241	3.80593	HOX{A6,A7,B6,B7}.p2	AK012595|2700090O03Rik|72632|RIKEN cDNA 2700090O03 gene
mm9_v1_chr14_-_65035722_65035811	3.80554	HOX{A6,A7,B6,B7}.p2	AK018338|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr18_+_23573908_23573935	3.80454	HOX{A6,A7,B6,B7}.p2	NM_010087|Dtna|13527|dystrobrevin alpha	NM_207650|Dtna|13527|dystrobrevin alpha
mm9_v1_chr11_+_87391881_87392001	3.80248	HOX{A6,A7,B6,B7}.p2	AK133933|Sept4|18952|septin 4	AK137299|Sept4|18952|septin 4	AK039859|Sept4|18952|septin 4
mm9_v1_chr4_+_119486921_119486941	3.77921	HOX{A6,A7,B6,B7}.p2	AK035881|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr19_-_5799376_5799434	3.76755	HOX{A6,A7,B6,B7}.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr15_-_8584897_8584949	3.753	HOX{A6,A7,B6,B7}.p2	U75376|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75378|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr18_+_64425037_64425080	3.74191	HOX{A6,A7,B6,B7}.p2	AK134678|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	BC075645|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK133780|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	X80502|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr2_-_63022140_63022343	3.73884	HOX{A6,A7,B6,B7}.p2	AJ291608|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK052366|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK043768|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK034003|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_133207|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm9_v1_chr1_-_64167818_64167853	3.72177	HOX{A6,A7,B6,B7}.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr4_+_8534378_8534506	3.70172	HOX{A6,A7,B6,B7}.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr6_+_77192615_77192722	3.68567	HOX{A6,A7,B6,B7}.p2	AK080836|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	NM_028880|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK014545|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK053345|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr6_-_52176102_52176188	3.68186	HOX{A6,A7,B6,B7}.p2	AB221551|Hoxa9|15405|homeobox A9	BC055059|Hoxa9|15405|homeobox A9
mm9_v1_chr2_-_7317513_7317626	3.676	HOX{A6,A7,B6,B7}.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr8_+_94190341_94190551	3.66792	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_104829951_104829954	3.65933	HOX{A6,A7,B6,B7}.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr10_+_87321789_87322010	3.64766	HOX{A6,A7,B6,B7}.p2	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr10_-_108447996_108448001	3.63772	HOX{A6,A7,B6,B7}.p2	AK013798|Syt1|20979|synaptotagmin I	AK078790|Syt1|20979|synaptotagmin I
mm9_v1_chr11_-_42134509_42134538	3.61491	HOX{A6,A7,B6,B7}.p2	X51986|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr9_-_96233411_96233654	3.57848	HOX{A6,A7,B6,B7}.p2	AK217555|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK213033|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK205378|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK217181|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK178890|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK181142|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK185963|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK212665|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK214140|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK216038|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218295|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218384|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr18_-_31476626_31476690	3.53872	HOX{A6,A7,B6,B7}.p2	AK140133|Rit2|19762|Ras-like without CAAX 2	AK046425|Rit2|19762|Ras-like without CAAX 2	AK139394|Rit2|19762|Ras-like without CAAX 2	AF084463|Rit2|19762|Ras-like without CAAX 2	AK162862|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr19_-_7501451_7501548	3.51773	HOX{A6,A7,B6,B7}.p2	AK211707|Rtn3|20168|reticulon 3
mm9_v1_chr14_-_104215770_104216122	3.49687	HOX{A6,A7,B6,B7}.p2	AK202768|Ednrb|13618|endothelin receptor type B	AK191663|Ednrb|13618|endothelin receptor type B	AK203096|Ednrb|13618|endothelin receptor type B	AK215811|Ednrb|13618|endothelin receptor type B
mm9_v1_chr10_-_108448003_108448027	3.48149	HOX{A6,A7,B6,B7}.p2	BC048187|Syt1|20979|synaptotagmin I	AK019304|Syt1|20979|synaptotagmin I	AK048973|Syt1|20979|synaptotagmin I	AK133578|Syt1|20979|synaptotagmin I
mm9_v1_chr18_+_37133455_37133703	3.47825	HOX{A6,A7,B6,B7}.p2	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr8_-_33028674_33028862	3.47308	HOX{A6,A7,B6,B7}.p2	AY648975|Nrg1|211323|neuregulin 1	NM_178591|Nrg1|211323|neuregulin 1	BC151113|Nrg1|211323|neuregulin 1	AK164499|Nrg1|211323|neuregulin 1	AK048708|Nrg1|211323|neuregulin 1	AK141037|Nrg1|211323|neuregulin 1
mm9_v1_chr9_+_34296412_34296564	3.46551	HOX{A6,A7,B6,B7}.p2	AK045373|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	BC063072|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK038385|Kirrel3|67703|kin of IRRE like 3 (Drosophila)
mm9_v1_chr8_-_70498472_70498472	3.44835	HOX{A6,A7,B6,B7}.p2	AB220685|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_177698|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr18_-_33623287_33623340	3.44401	HOX{A6,A7,B6,B7}.p2	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr17_+_44090192_44090211	3.42895	HOX{A6,A7,B6,B7}.p2	AB061524|Rcan2|53901|regulator of calcineurin 2	AK049006|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr9_+_120058842_120058868	3.42288	HOX{A6,A7,B6,B7}.p2	AK013799|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK019323|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK028057|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK083103|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK140055|Mobp|17433|myelin-associated oligodendrocytic basic protein	BC048492|Mobp|17433|myelin-associated oligodendrocytic basic protein	NM_001039364|Mobp|17433|myelin-associated oligodendrocytic basic protein	NM_001039365|Mobp|17433|myelin-associated oligodendrocytic basic protein	NM_008614|Mobp|17433|myelin-associated oligodendrocytic basic protein
mm9_v1_chr15_+_4325490_4325644	3.41127	HOX{A6,A7,B6,B7}.p2	AK038575|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_177355|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137637|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137639|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	AK044972|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm9_v1_chr11_-_41995934_41995976	3.37785	HOX{A6,A7,B6,B7}.p2	AK142450|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr1_-_134603848_134603902	3.37305	HOX{A6,A7,B6,B7}.p2	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr5_+_67067497_67067526	3.36279	HOX{A6,A7,B6,B7}.p2	BC039177|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AB025313|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AF172334|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr15_-_56526052_56526100	3.34799	HOX{A6,A7,B6,B7}.p2	U52524|Has2|15117|hyaluronan synthase 2	BC080281|Has2|15117|hyaluronan synthase 2	U69695|Has2|15117|hyaluronan synthase 2	AK045020|Has2|15117|hyaluronan synthase 2	AK079729|Has2|15117|hyaluronan synthase 2	NM_008216|Has2|15117|hyaluronan synthase 2
mm9_v1_chr11_+_16157685_16157805	3.25051	HOX{A6,A7,B6,B7}.p2	AK033048|Vstm2a|211739|V-set and transmembrane domain containing 2A	NM_145967|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK032473|Vstm2a|211739|V-set and transmembrane domain containing 2A	BC027127|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK079096|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK137363|Vstm2a|211739|V-set and transmembrane domain containing 2A
mm9_v1_chr18_+_82754586_82754645	3.24247	HOX{A6,A7,B6,B7}.p2	AK194642|Mbp|17196|myelin basic protein
mm9_v1_chr19_+_38339167_38339370	3.23535	HOX{A6,A7,B6,B7}.p2	AK045443|Lgi1|56839|leucine-rich repeat LGI family, member 1	BC066090|Lgi1|56839|leucine-rich repeat LGI family, member 1	NM_020278|Lgi1|56839|leucine-rich repeat LGI family, member 1	AF246818|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK035873|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK031996|Lgi1|56839|leucine-rich repeat LGI family, member 1
mm9_v1_chr12_-_77811119_77811130	3.22795	HOX{A6,A7,B6,B7}.p2	AK147684|Spnb1|20741|spectrin beta 1	AK147704|Spnb1|20741|spectrin beta 1
mm9_v1_chr10_+_96942263_96942299	3.1987	HOX{A6,A7,B6,B7}.p2	AK052759|Dcn|13179|decorin	AK035609|Dcn|13179|decorin
mm9_v1_chr2_+_181501718_181501871	3.18574	HOX{A6,A7,B6,B7}.p2	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr18_+_82754377_82754564	3.16132	HOX{A6,A7,B6,B7}.p2	AK002947|Mbp|17196|myelin basic protein	AK203705|Mbp|17196|myelin basic protein	AK194025|Mbp|17196|myelin basic protein
mm9_v1_chr3_+_84756090_84756352	3.14794	HOX{A6,A7,B6,B7}.p2	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr7_-_38554642_38554770	3.10699	HOX{A6,A7,B6,B7}.p2	AK122270|Zfp536|243937|zinc finger protein 536	AK030633|Zfp536|243937|zinc finger protein 536	NM_172385|Zfp536|243937|zinc finger protein 536
mm9_v1_chr11_+_29618696_29618843	3.05775	HOX{A6,A7,B6,B7}.p2	AF326337|Rtn4|68585|reticulon 4
mm9_v1_chr18_-_72367655_72367683	3.02815	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_20378816_20378944	3.02624	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_72149332_72149349	3.00822	HOX{A6,A7,B6,B7}.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr6_-_145167481_145167570	3.0065	HOX{A6,A7,B6,B7}.p2	BC014700|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC031623|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm9_v1_chr15_+_61817102_61817119	3.00215	HOX{A6,A7,B6,B7}.p2	AK087961|Myc|17869|myelocytomatosis oncogene	AK133952|Myc|17869|myelocytomatosis oncogene
mm9_v1_chrX_-_149078963_149079085	2.9987	HOX{A6,A7,B6,B7}.p2	AK029338|Shroom2|110380|shroom family member 2	AK032256|Shroom2|110380|shroom family member 2	AK049850|Shroom2|110380|shroom family member 2	BC092373|Shroom2|110380|shroom family member 2
mm9_v1_chr12_-_42212538_42212554	2.98547	HOX{A6,A7,B6,B7}.p2	AK036316|Lrrn3|16981|leucine rich repeat protein 3, neuronal	D49802|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr18_-_31476721_31476786	2.97886	HOX{A6,A7,B6,B7}.p2	U71202|Rit2|19762|Ras-like without CAAX 2	AK162953|Rit2|19762|Ras-like without CAAX 2	AK040743|Rit2|19762|Ras-like without CAAX 2	AK041418|Rit2|19762|Ras-like without CAAX 2	BC018267|Rit2|19762|Ras-like without CAAX 2	NM_009065|Rit2|19762|Ras-like without CAAX 2	AK140726|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr11_-_99105293_99105435	2.97412	HOX{A6,A7,B6,B7}.p2	BC079890|Krt222|268481|keratin 222	AK031954|Krt222|268481|keratin 222	NM_172946|Krt222|268481|keratin 222	AK044068|Krt222|268481|keratin 222	AK138778|Krt222|268481|keratin 222
mm9_v1_chr9_-_58049521_58049605	2.97405	HOX{A6,A7,B6,B7}.p2	BC096531|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	NM_001161535|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	NM_001161537|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	NM_001161540|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr5_-_135223110_135223192	2.97292	HOX{A6,A7,B6,B7}.p2	U08210|Eln|13717|elastin	BC051074|Eln|13717|elastin	AK086777|Eln|13717|elastin	AK041860|Eln|13717|elastin	NM_007925|Eln|13717|elastin	AK080277|Eln|13717|elastin	BC051649|Eln|13717|elastin
mm9_v1_chr11_+_16951805_16951896	2.94916	HOX{A6,A7,B6,B7}.p2	AK087090|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK148349|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK171947|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chrX_+_35954355_35954475	2.94167	HOX{A6,A7,B6,B7}.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr18_+_37663917_37664076	2.92426	HOX{A6,A7,B6,B7}.p2	AK045399|Pcdhb20|93891|protocadherin beta 20	NM_053145|Pcdhb20|93891|protocadherin beta 20	AK046137|Pcdhb20|93891|protocadherin beta 20	AF326313|Pcdhb20|93891|protocadherin beta 20	AK045527|Pcdhb20|93891|protocadherin beta 20	BC031895|Pcdhb20|93891|protocadherin beta 20	AY013782|Pcdhb20|93891|protocadherin beta 20
mm9_v1_chr18_-_35374663_35374683	2.89695	HOX{A6,A7,B6,B7}.p2	AK122278|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK036155|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK044705|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046774|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	NM_178005|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr16_+_91225794_91225820	2.88546	HOX{A6,A7,B6,B7}.p2	BC051967|Olig2|50913|oligodendrocyte transcription factor 2	NM_016967|Olig2|50913|oligodendrocyte transcription factor 2	AB038697|Olig2|50913|oligodendrocyte transcription factor 2	AK080615|Olig2|50913|oligodendrocyte transcription factor 2
mm9_v1_chr4_-_126430511_126430686	2.87827	HOX{A6,A7,B6,B7}.p2	BC017126|Ncdn|26562|neurochondrin	AK154889|Ncdn|26562|neurochondrin	AK170502|Ncdn|26562|neurochondrin	NM_011986|Ncdn|26562|neurochondrin
mm9_v1_chr4_+_9196439_9196508	2.86487	HOX{A6,A7,B6,B7}.p2	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr6_-_115201846_115201865	2.79664	HOX{A6,A7,B6,B7}.p2	BC064046|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK038820|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK040814|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr13_+_109906361_109906552	2.79557	HOX{A6,A7,B6,B7}.p2	AK035860|Pde4d|238871|phosphodiesterase 4D, cAMP specific	AK081013|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr2_-_6642489_6642726	2.77753	HOX{A6,A7,B6,B7}.p2	AK137555|Celf2|14007|CUGBP, Elav-like family member 2	AK151818|Celf2|14007|CUGBP, Elav-like family member 2	AK152628|Celf2|14007|CUGBP, Elav-like family member 2	AK153267|Celf2|14007|CUGBP, Elav-like family member 2	AK162651|Celf2|14007|CUGBP, Elav-like family member 2	AK172648|Celf2|14007|CUGBP, Elav-like family member 2	AK169542|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr11_-_106642357_106642481	2.76912	HOX{A6,A7,B6,B7}.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr13_+_49600158_49600323	2.76051	HOX{A6,A7,B6,B7}.p2	AK040995|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC089559|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	NM_001012324|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK134746|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK163501|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC056468|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC065151|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK038812|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific
mm9_v1_chr19_-_5800268_5800325	2.76047	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_24919916_24919967	2.75605	HOX{A6,A7,B6,B7}.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr2_+_4073908_4073934	2.74175	HOX{A6,A7,B6,B7}.p2	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr13_+_59234737_59234835	2.72189	HOX{A6,A7,B6,B7}.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr1_-_170085798_170085873	2.71094	HOX{A6,A7,B6,B7}.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr7_-_123182257_123182257	2.70318	HOX{A6,A7,B6,B7}.p2	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr18_+_69504145_69504185	2.67338	HOX{A6,A7,B6,B7}.p2	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chrX_+_21061748_21061785	2.66927	HOX{A6,A7,B6,B7}.p2	AK140941|Agtr2|11609|angiotensin II receptor, type 2	AK086334|Agtr2|11609|angiotensin II receptor, type 2	NM_007429|Agtr2|11609|angiotensin II receptor, type 2	L32840|Agtr2|11609|angiotensin II receptor, type 2	S67465|Agtr2|11609|angiotensin II receptor, type 2	U04828|Agtr2|11609|angiotensin II receptor, type 2
mm9_v1_chr3_+_17954689_17954736	2.66493	HOX{A6,A7,B6,B7}.p2	AF218865|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr11_+_75578120_75578179	2.66121	HOX{A6,A7,B6,B7}.p2	AK218111|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK180909|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr11_-_100576628_100576692	2.65381	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_82151590_82151637	2.63691	HOX{A6,A7,B6,B7}.p2	Y07685|Nfib|18028|nuclear factor I/B
mm9_v1_chr1_+_169528492_169528646	2.6301	HOX{A6,A7,B6,B7}.p2	NM_009107|Rxrg|20183|retinoid X receptor gamma	BC058401|Rxrg|20183|retinoid X receptor gamma	S62948|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr4_+_44045506_44045645	2.62092	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_101927346_101927346	2.61974	HOX{A6,A7,B6,B7}.p2	BC049864|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177983|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr1_+_155756310_155756313	2.59309	HOX{A6,A7,B6,B7}.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr3_+_8509479_8509599	2.59218	HOX{A6,A7,B6,B7}.p2	AK149212|Stmn2|20257|stathmin-like 2	AK043202|Stmn2|20257|stathmin-like 2	AK003659|Stmn2|20257|stathmin-like 2	AK013020|Stmn2|20257|stathmin-like 2	NM_025285|Stmn2|20257|stathmin-like 2	BC026538|Stmn2|20257|stathmin-like 2
mm9_v1_chr12_-_103057259_103057314	2.59208	HOX{A6,A7,B6,B7}.p2	AK090129|Fbln5|23876|fibulin 5	NM_011812|Fbln5|23876|fibulin 5	AF112151|Fbln5|23876|fibulin 5	AK157936|Fbln5|23876|fibulin 5	AK159960|Fbln5|23876|fibulin 5	AK159471|Fbln5|23876|fibulin 5
mm9_v1_chr3_+_67696141_67696177	2.58349	HOX{A6,A7,B6,B7}.p2	AK052136|Iqcj|208426|IQ motif containing J	NM_001113419|Iqcj-schip1|100505386|IQ motif containing J-schwannomin interacting protein 1 read-through transcript	NM_177585|Iqcj|208426|IQ motif containing J	BC107305|Iqcj|208426|IQ motif containing J	BC107306|Iqcj|208426|IQ motif containing J
mm9_v1_chr10_+_105907394_105907408	2.57522	HOX{A6,A7,B6,B7}.p2	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr11_+_51926650_51926652	2.54747	HOX{A6,A7,B6,B7}.p2	AK199825|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr7_+_98239230_98239295	2.54099	HOX{A6,A7,B6,B7}.p2	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr6_+_96063137_96063148	2.51039	HOX{A6,A7,B6,B7}.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr4_+_97444450_97444485	2.50607	HOX{A6,A7,B6,B7}.p2	AK054310|Nfia|18027|nuclear factor I/A	AK137731|Nfia|18027|nuclear factor I/A
mm9_v1_chr3_-_95032039_95032230	2.49028	HOX{A6,A7,B6,B7}.p2	BC022963|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK046005|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	U95498|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AB000733|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK158495|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr18_+_82753560_82753917	2.47706	HOX{A6,A7,B6,B7}.p2	AK205832|Mbp|17196|myelin basic protein	AK195683|Mbp|17196|myelin basic protein	AK198099|Mbp|17196|myelin basic protein
mm9_v1_chr14_-_94287950_94288026	2.44755	HOX{A6,A7,B6,B7}.p2	NM_001081377|Pcdh9|211712|protocadherin 9	BC157952|Pcdh9|211712|protocadherin 9	BC172098|Pcdh9|211712|protocadherin 9	BC158114|Pcdh9|211712|protocadherin 9	BC158117|Pcdh9|211712|protocadherin 9
mm9_v1_chrX_-_140367467_140367853	2.44436	HOX{A6,A7,B6,B7}.p2	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr11_-_76322920_76322935	2.44126	HOX{A6,A7,B6,B7}.p2	BC058708|Abr|109934|active BCR-related gene	NM_198018|Abr|109934|active BCR-related gene
mm9_v1_chr1_+_111880313_111880391	2.43519	HOX{A6,A7,B6,B7}.p2	AK034096|Cdh7|241201|cadherin 7, type 2	NM_172853|Cdh7|241201|cadherin 7, type 2	AK137369|Cdh7|241201|cadherin 7, type 2
mm9_v1_chr3_+_136460712_136460798	2.43361	HOX{A6,A7,B6,B7}.p2	AK209023|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr9_+_62705890_62705945	2.42693	HOX{A6,A7,B6,B7}.p2	AY061807|Calml4|75600|calmodulin-like 4	NM_001102468|Calml4|75600|calmodulin-like 4	NM_138304|Calml4|75600|calmodulin-like 4	AK008039|Calml4|75600|calmodulin-like 4	BC013541|Calml4|75600|calmodulin-like 4	AK146656|Calml4|75600|calmodulin-like 4	BC023475|Calml4|75600|calmodulin-like 4
mm9_v1_chr12_+_110784600_110784655	2.4239	HOX{A6,A7,B6,B7}.p2	AK032021|Meg3|17263|maternally expressed 3	AK141629|Meg3|17263|maternally expressed 3
mm9_v1_chr9_+_72859850_72859978	2.41865	HOX{A6,A7,B6,B7}.p2	BC006717|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr16_+_57152994_57153228	2.41797	HOX{A6,A7,B6,B7}.p2	BC025450|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK011763|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr3_-_146433200_146433208	2.41693	HOX{A6,A7,B6,B7}.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr12_-_73337707_73337756	2.40889	HOX{A6,A7,B6,B7}.p2	AK002997|Rtn1|104001|reticulon 1	NM_001007596|Rtn1|104001|reticulon 1
mm9_v1_chr6_-_136123091_136123161	2.40133	HOX{A6,A7,B6,B7}.p2	AK013569|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chrX_-_18744357_18744370	2.39931	HOX{A6,A7,B6,B7}.p2	AK170409|Gm14636|100038616|predicted gene 14636
mm9_v1_chr4_+_28740314_28740475	2.39288	HOX{A6,A7,B6,B7}.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr12_+_39510297_39510297	2.39046	HOX{A6,A7,B6,B7}.p2	AK032224|Etv1|14009|ets variant gene 1	NM_001163154|Etv1|14009|ets variant gene 1
mm9_v1_chr12_+_110783593_110783620	2.38862	HOX{A6,A7,B6,B7}.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr4_+_109015660_109015680	2.37655	HOX{A6,A7,B6,B7}.p2	NM_001159964|Eps15|13858|epidermal growth factor receptor pathway substrate 15	AK083176|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr10_+_69169221_69169231	2.37631	HOX{A6,A7,B6,B7}.p2	AK141720|Ank3|11735|ankyrin 3, epithelial	AK081055|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr11_-_95936914_95937007	2.3758	HOX{A6,A7,B6,B7}.p2	BC003854|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008191|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK009883|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_001161419|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011432|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008998|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011054|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK167884|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK010868|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_007506|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
mm9_v1_chr3_-_152645143_152645180	2.36706	HOX{A6,A7,B6,B7}.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr16_+_96689322_96689354	2.363	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_93905501_93905545	2.36071	HOX{A6,A7,B6,B7}.p2	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr11_+_31900378_31900504	2.35924	HOX{A6,A7,B6,B7}.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chrX_+_111587911_111588212	2.35535	HOX{A6,A7,B6,B7}.p2	AK081448|Klhl4|237010|kelch-like 4 (Drosophila)	AK085099|Klhl4|237010|kelch-like 4 (Drosophila)	AK161786|Klhl4|237010|kelch-like 4 (Drosophila)	BC099954|Klhl4|237010|kelch-like 4 (Drosophila)	AK081937|Klhl4|237010|kelch-like 4 (Drosophila)	NM_172781|Klhl4|237010|kelch-like 4 (Drosophila)	BC141251|Klhl4|237010|kelch-like 4 (Drosophila)	BC057137|Klhl4|237010|kelch-like 4 (Drosophila)	AK044930|Klhl4|237010|kelch-like 4 (Drosophila)
mm9_v1_chr4_+_28740280_28740313	2.33446	HOX{A6,A7,B6,B7}.p2	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chrX_-_161764912_161765057	2.33043	HOX{A6,A7,B6,B7}.p2	BC056342|Glra2|237213|glycine receptor, alpha 2 subunit	BC068987|Glra2|237213|glycine receptor, alpha 2 subunit	NM_183427|Glra2|237213|glycine receptor, alpha 2 subunit	AK135134|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr3_+_89324085_89324085	2.32462	HOX{A6,A7,B6,B7}.p2	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr5_-_104508289_104508325	2.3097	HOX{A6,A7,B6,B7}.p2	AK002996|Sparcl1|13602|SPARC-like 1
mm9_v1_chr8_+_109555200_109555247	2.29963	HOX{A6,A7,B6,B7}.p2	AK159117|Vps4a|116733|vacuolar protein sorting 4a (yeast)	AK047821|Vps4a|116733|vacuolar protein sorting 4a (yeast)	BC018368|Vps4a|116733|vacuolar protein sorting 4a (yeast)	NM_126165|Vps4a|116733|vacuolar protein sorting 4a (yeast)	AK169949|Vps4a|116733|vacuolar protein sorting 4a (yeast)
mm9_v1_chr12_+_109843975_109843976	2.28746	HOX{A6,A7,B6,B7}.p2	AK134563|Evl|14026|Ena-vasodilator stimulated phosphoprotein	NM_001163395|Evl|14026|Ena-vasodilator stimulated phosphoprotein
mm9_v1_chr13_+_58909168_58909217	2.28176	HOX{A6,A7,B6,B7}.p2	NM_001025074|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	X17647|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr15_-_58614642_58614788	2.26295	HOX{A6,A7,B6,B7}.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr9_-_49607017_49607038	2.25926	HOX{A6,A7,B6,B7}.p2	AK011804|Ncam1|17967|neural cell adhesion molecule 1	AK011905|Ncam1|17967|neural cell adhesion molecule 1	AK082621|Ncam1|17967|neural cell adhesion molecule 1	AK051197|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr2_-_119096952_119096961	2.24465	HOX{A6,A7,B6,B7}.p2	BC021307|Rhov|228543|ras homolog gene family, member V	AK036775|Rhov|228543|ras homolog gene family, member V	AK037170|Rhov|228543|ras homolog gene family, member V	NM_145530|Rhov|228543|ras homolog gene family, member V
mm9_v1_chr3_+_55265811_55265928	2.23976	HOX{A6,A7,B6,B7}.p2	AF155821|Dclk1|13175|doublecortin-like kinase 1	AK032424|Dclk1|13175|doublecortin-like kinase 1	AK081200|Dclk1|13175|doublecortin-like kinase 1	AB073969|Dclk1|13175|doublecortin-like kinase 1	AK047716|Dclk1|13175|doublecortin-like kinase 1	AY968047|Dclk1|13175|doublecortin-like kinase 1	AY968048|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr5_+_104864136_104864144	2.22627	HOX{A6,A7,B6,B7}.p2	AK160540|Spp1|20750|secreted phosphoprotein 1	NM_009263|Spp1|20750|secreted phosphoprotein 1	AK133555|Spp1|20750|secreted phosphoprotein 1	AK145099|Spp1|20750|secreted phosphoprotein 1	AK149588|Spp1|20750|secreted phosphoprotein 1	AK150819|Spp1|20750|secreted phosphoprotein 1	AK150845|Spp1|20750|secreted phosphoprotein 1	AK151562|Spp1|20750|secreted phosphoprotein 1	AK153089|Spp1|20750|secreted phosphoprotein 1	AK154908|Spp1|20750|secreted phosphoprotein 1	AK165393|Spp1|20750|secreted phosphoprotein 1	AK165965|Spp1|20750|secreted phosphoprotein 1	AK166395|Spp1|20750|secreted phosphoprotein 1	AK171158|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr5_+_58109278_58109341	2.21676	HOX{A6,A7,B6,B7}.p2	AK140356|Pcdh7|54216|protocadherin 7	AB006758|Pcdh7|54216|protocadherin 7
mm9_v1_chr18_-_14002490_14002628	2.21109	HOX{A6,A7,B6,B7}.p2	BC023458|Zfp521|225207|zinc finger protein 521
mm9_v1_chr16_-_22439642_22439745	2.1996	HOX{A6,A7,B6,B7}.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr5_+_67067477_67067482	2.19355	HOX{A6,A7,B6,B7}.p2	AK004066|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AK013729|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr18_-_6516073_6516084	2.18543	HOX{A6,A7,B6,B7}.p2	AK148194|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	AF079765|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	NM_007935|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)
mm9_v1_chr7_+_129776837_129777102	2.17438	HOX{A6,A7,B6,B7}.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr11_+_94871620_94871635	2.17368	HOX{A6,A7,B6,B7}.p2	BC049954|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr10_-_33344405_33344571	2.16382	HOX{A6,A7,B6,B7}.p2	AK039308|Clvs2|215890|clavesin 2	NM_175448|Clvs2|215890|clavesin 2	BC058539|Clvs2|215890|clavesin 2	AK163214|Clvs2|215890|clavesin 2	AK053797|Clvs2|215890|clavesin 2	AK139868|Clvs2|215890|clavesin 2	AK139409|Clvs2|215890|clavesin 2	AK169009|Clvs2|215890|clavesin 2
mm9_v1_chr6_-_51416921_51416984	2.1626	HOX{A6,A7,B6,B7}.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr9_-_49311823_49311910	2.15248	HOX{A6,A7,B6,B7}.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr6_-_13788453_13788525	2.15188	HOX{A6,A7,B6,B7}.p2	AK043090|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr4_+_8617613_8617703	2.13129	HOX{A6,A7,B6,B7}.p2	AK035953|Chd7|320790|chromodomain helicase DNA binding protein 7
mm9_v1_chr2_+_136581861_136581917	2.12749	HOX{A6,A7,B6,B7}.p2	AF483516|Snap25|20614|synaptosomal-associated protein 25	AF483517|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr13_-_100286521_100286556	2.12726	HOX{A6,A7,B6,B7}.p2	NM_008634|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr9_+_40076800_40077017	2.12136	HOX{A6,A7,B6,B7}.p2	NM_001083917|Scn3b|235281|sodium channel, voltage-gated, type III, beta	NM_153522|Scn3b|235281|sodium channel, voltage-gated, type III, beta	NM_178227|Scn3b|235281|sodium channel, voltage-gated, type III, beta	BC058636|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK049286|Scn3b|235281|sodium channel, voltage-gated, type III, beta	BC058083|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK051805|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK173115|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK049747|Scn3b|235281|sodium channel, voltage-gated, type III, beta
mm9_v1_chr5_-_23012407_23012525	2.09504	HOX{A6,A7,B6,B7}.p2	AK044922|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK201776|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr9_-_40184005_40184028	2.08568	HOX{A6,A7,B6,B7}.p2	AK122465|Gramd1b|235283|GRAM domain containing 1B
mm9_v1_chr6_-_126116761_126116761	2.08524	HOX{A6,A7,B6,B7}.p2	NM_001164034|Ntf3|18205|neurotrophin 3	NM_008742|Ntf3|18205|neurotrophin 3
mm9_v1_chr1_-_157264398_157264577	2.08283	HOX{A6,A7,B6,B7}.p2	AK147403|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC153872|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF114753|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC075721|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AK141660|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	NM_011273|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr9_-_60497537_60497561	2.07318	HOX{A6,A7,B6,B7}.p2	AK082406|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr5_-_33590505_33590587	2.06613	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_125860377_125860409	2.06601	HOX{A6,A7,B6,B7}.p2	AK037172|Fgf7|14178|fibroblast growth factor 7	NM_008008|Fgf7|14178|fibroblast growth factor 7
mm9_v1_chr18_+_37127284_37127409	2.06342	HOX{A6,A7,B6,B7}.p2	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr13_+_113078658_113078796	2.05664	HOX{A6,A7,B6,B7}.p2	AK039553|Ankrd55|77318|ankyrin repeat domain 55	NM_001168403|Ankrd55|77318|ankyrin repeat domain 55	NM_001168405|Ankrd55|77318|ankyrin repeat domain 55	NM_029898|Ankrd55|77318|ankyrin repeat domain 55	AK081197|Ankrd55|77318|ankyrin repeat domain 55	NM_001168404|Ankrd55|77318|ankyrin repeat domain 55	AK140417|Ankrd55|77318|ankyrin repeat domain 55
mm9_v1_chr5_-_136384495_136384514	2.05212	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_119913623_119913750	2.04944	HOX{A6,A7,B6,B7}.p2	BC146009|Wnk1|232341|WNK lysine deficient protein kinase 1	BC146011|Wnk1|232341|WNK lysine deficient protein kinase 1
mm9_v1_chr2_+_163843294_163843512	2.04144	HOX{A6,A7,B6,B7}.p2	AK206846|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK207996|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK212148|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK214843|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK215126|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK219468|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr8_+_68141935_68142010	2.03762	HOX{A6,A7,B6,B7}.p2	AK013582|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166372|March1|72925|membrane-associated ring finger (C3HC4) 1	AK086052|March1|72925|membrane-associated ring finger (C3HC4) 1	AK137337|March1|72925|membrane-associated ring finger (C3HC4) 1	AK160684|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr12_+_25741653_25741728	2.03422	HOX{A6,A7,B6,B7}.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr2_-_73498303_73498483	2.02743	HOX{A6,A7,B6,B7}.p2	AB264771|Chn1|108699|chimerin (chimaerin) 1	BC025023|Chn1|108699|chimerin (chimaerin) 1	AK049943|Chn1|108699|chimerin (chimaerin) 1	AK147686|Chn1|108699|chimerin (chimaerin) 1	BC010825|Chn1|108699|chimerin (chimaerin) 1	BC024796|Chn1|108699|chimerin (chimaerin) 1	AK032630|Chn1|108699|chimerin (chimaerin) 1	AK075606|Chn1|108699|chimerin (chimaerin) 1	NM_001166604|Chn1|108699|chimerin (chimaerin) 1	NM_175752|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr6_+_88674821_88674926	2.02718	HOX{A6,A7,B6,B7}.p2	AJ316580|Mgll|23945|monoglyceride lipase
mm9_v1_chr5_+_32794685_32794762	2.00667	HOX{A6,A7,B6,B7}.p2	AK017392|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr15_+_89116972_89117036	2.00592	HOX{A6,A7,B6,B7}.p2	AK080435|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2
mm9_v1_chr13_+_58909236_58909250	2.00117	HOX{A6,A7,B6,B7}.p2	AK028827|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr2_+_177876635_177876639	1.98859	HOX{A6,A7,B6,B7}.p2	AK135144|Phactr3|74189|phosphatase and actin regulator 3	NM_028806|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr18_+_37975071_37975186	1.97636	HOX{A6,A7,B6,B7}.p2	AK139465|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	AY013812|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr5_+_67067359_67067456	1.96741	HOX{A6,A7,B6,B7}.p2	NM_011670|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr17_-_90855291_90855342	1.96303	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_37560490_37560542	1.94153	HOX{A6,A7,B6,B7}.p2	AK032626|Pcdhb9|93880|protocadherin beta 9	NM_053134|Pcdhb9|93880|protocadherin beta 9	BC055319|Pcdhb9|93880|protocadherin beta 9	BC062640|Pcdhb9|93880|protocadherin beta 9
mm9_v1_chr11_+_20124648_20124793	1.93953	HOX{A6,A7,B6,B7}.p2	AK207850|Rab1|19324|RAB1, member RAS oncogene family	AK215283|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr2_+_69588414_69588564	1.93748	HOX{A6,A7,B6,B7}.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr11_-_30168142_30168145	1.93366	HOX{A6,A7,B6,B7}.p2	BC092544|Spnb2|20742|spectrin beta 2
mm9_v1_chr14_+_84933363_84933455	1.93066	HOX{A6,A7,B6,B7}.p2	AK045478|Pcdh17|219228|protocadherin 17	AK079626|Pcdh17|219228|protocadherin 17	AK046505|Pcdh17|219228|protocadherin 17	AK047338|Pcdh17|219228|protocadherin 17
mm9_v1_chr18_+_69753146_69753168	1.92681	HOX{A6,A7,B6,B7}.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr17_+_86567003_86567165	1.91078	HOX{A6,A7,B6,B7}.p2	AK082438|Prkce|18754|protein kinase C, epsilon	NM_011104|Prkce|18754|protein kinase C, epsilon	AK042994|Prkce|18754|protein kinase C, epsilon
mm9_v1_chr5_+_119214935_119215085	1.91005	HOX{A6,A7,B6,B7}.p2	AK083611|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr18_+_34407238_34407352	1.90093	HOX{A6,A7,B6,B7}.p2	AK039061|Apc|11789|adenomatosis polyposis coli	L19608|Apc|11789|adenomatosis polyposis coli	AK082724|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr8_-_63433528_63433596	1.89324	HOX{A6,A7,B6,B7}.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr5_-_149320857_149320933	1.88041	HOX{A6,A7,B6,B7}.p2	AK197397|Ubl3|24109|ubiquitin-like 3	AK204771|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr18_-_84255781_84255953	1.87826	HOX{A6,A7,B6,B7}.p2	BC040215|Tshz1|110796|teashirt zinc finger family member 1	AK220545|Tshz1|110796|teashirt zinc finger family member 1	AK152140|Tshz1|110796|teashirt zinc finger family member 1	NM_001081300|Tshz1|110796|teashirt zinc finger family member 1
mm9_v1_chr13_-_58228398_58228433	1.87005	HOX{A6,A7,B6,B7}.p2	AK172180|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr10_+_59568976_59569004	1.86144	HOX{A6,A7,B6,B7}.p2	AJ278999|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	BC057324|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	NM_052994|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr5_-_143665474_143665607	1.85896	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_78640103_78640114	1.85278	HOX{A6,A7,B6,B7}.p2	BC130224|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene	AK009070|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene
mm9_v1_chr8_+_120807621_120807654	1.85184	HOX{A6,A7,B6,B7}.p2	AK032409|Cdh13|12554|cadherin 13	AK039438|Cdh13|12554|cadherin 13	AB022100|Cdh13|12554|cadherin 13	BC021628|Cdh13|12554|cadherin 13	AK045201|Cdh13|12554|cadherin 13	AK048724|Cdh13|12554|cadherin 13	NM_019707|Cdh13|12554|cadherin 13
mm9_v1_chr18_+_37915375_37915594	1.84513	HOX{A6,A7,B6,B7}.p2	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr7_+_128219633_128219975	1.8382	HOX{A6,A7,B6,B7}.p2	AK003378|Mettl9|59052|methyltransferase like 9	AK194757|Mettl9|59052|methyltransferase like 9	AK206305|Mettl9|59052|methyltransferase like 9	AK208785|Mettl9|59052|methyltransferase like 9	AK209460|Mettl9|59052|methyltransferase like 9	AK211016|Mettl9|59052|methyltransferase like 9	AK212761|Mettl9|59052|methyltransferase like 9	AK216310|Mettl9|59052|methyltransferase like 9	AK218040|Mettl9|59052|methyltransferase like 9	AK196516|Mettl9|59052|methyltransferase like 9	AK199334|Mettl9|59052|methyltransferase like 9	AK212785|Mettl9|59052|methyltransferase like 9
mm9_v1_chr9_-_112134930_112134962	1.8164	HOX{A6,A7,B6,B7}.p2	AK032417|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr16_-_84955086_84955166	1.81626	HOX{A6,A7,B6,B7}.p2	AK190928|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr5_+_75548337_75548416	1.80221	HOX{A6,A7,B6,B7}.p2	AK136490|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK035501|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK147267|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	BC020405|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	BC037467|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	M57683|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide
mm9_v1_chr7_-_52359079_52359191	1.8002	HOX{A6,A7,B6,B7}.p2	BC003786|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	D37874|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK152879|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK146933|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK008167|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK008360|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	NM_010189|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter
mm9_v1_chr4_+_13678443_13678575	1.78053	HOX{A6,A7,B6,B7}.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr13_-_58228079_58228222	1.77588	HOX{A6,A7,B6,B7}.p2	AK004260|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr11_-_97372344_97372370	1.77315	HOX{A6,A7,B6,B7}.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr12_+_62625477_62625618	1.7568	HOX{A6,A7,B6,B7}.p2	AK048443|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5	AK034245|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5	NM_178714|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr14_+_76362274_76362304	1.73753	HOX{A6,A7,B6,B7}.p2	AK032624|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK017592|Kctd4|67516|potassium channel tetramerisation domain containing 4	BC028748|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK032314|Kctd4|67516|potassium channel tetramerisation domain containing 4
mm9_v1_chr4_-_106136704_106136777	1.732	HOX{A6,A7,B6,B7}.p2	AK149520|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9	AK043077|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9
mm9_v1_chr5_+_27588462_27588514	1.72066	HOX{A6,A7,B6,B7}.p2	NM_001136060|Dpp6|13483|dipeptidylpeptidase 6	AK031903|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr16_-_95680627_95680683	1.71991	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_144482979_144483095	1.71371	HOX{A6,A7,B6,B7}.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr2_+_163843744_163843775	1.71255	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_41996141_41996431	1.70593	HOX{A6,A7,B6,B7}.p2	AK141596|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK034095|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	NM_010250|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr11_+_16951911_16951955	1.69833	HOX{A6,A7,B6,B7}.p2	AK019934|Cnrip1|380686|cannabinoid receptor interacting protein 1	BC087946|Cnrip1|380686|cannabinoid receptor interacting protein 1	NM_029861|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr11_-_79317583_79317590	1.68935	HOX{A6,A7,B6,B7}.p2	NM_019409|Omg|18377|oligodendrocyte myelin glycoprotein	AK136910|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr15_-_54751515_54751700	1.68935	HOX{A6,A7,B6,B7}.p2	EU131009|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	EU131010|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_001136077|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC003264|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AF123542|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK088491|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK161144|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK163881|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC058759|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK038940|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_015744|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr10_+_40069255_40069363	1.68053	HOX{A6,A7,B6,B7}.p2	AK052818|Cdk19|78334|cyclin-dependent kinase 19	AK147340|Cdk19|78334|cyclin-dependent kinase 19	BC062100|Cdk19|78334|cyclin-dependent kinase 19	BC048908|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr18_-_23200150_23200199	1.67897	HOX{A6,A7,B6,B7}.p2	AK006244|Nol4|319211|nucleolar protein 4	AK031008|Nol4|319211|nucleolar protein 4	NM_199024|Nol4|319211|nucleolar protein 4	AK005959|Nol4|319211|nucleolar protein 4
mm9_v1_chr16_-_85120798_85120921	1.67446	HOX{A6,A7,B6,B7}.p2	AK194233|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr11_+_56825307_56825536	1.6643	HOX{A6,A7,B6,B7}.p2	AK049958|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC056397|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102773|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102774|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC060702|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr3_-_127111968_127111977	1.66305	HOX{A6,A7,B6,B7}.p2	AK036018|Ank2|109676|ankyrin 2, brain
mm9_v1_chr14_+_120724380_120724561	1.66033	HOX{A6,A7,B6,B7}.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr7_-_110976439_110976454	1.65006	HOX{A6,A7,B6,B7}.p2	AK002258|Hbb-b1|15129|hemoglobin, beta adult major chain	AK003096|Hbb-b1|15129|hemoglobin, beta adult major chain	AK003472|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005442|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010902|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010980|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010981|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010991|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010993|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011006|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011013|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011016|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011027|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011067|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011077|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011083|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011102|Hbb-b1|15129|hemoglobin, beta adult major chain	AK027904|Hbb-b1|15129|hemoglobin, beta adult major chain	AK088149|Hbb-b1|15129|hemoglobin, beta adult major chain	AK133714|Hbb-b1|15129|hemoglobin, beta adult major chain	AK160629|Hbb-b1|15129|hemoglobin, beta adult major chain	AK161021|Hbb-b1|15129|hemoglobin, beta adult major chain	AK165490|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168562|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168826|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168846|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005490|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011069|Hbb-b1|15129|hemoglobin, beta adult major chain	AK027903|Hbb-b1|15129|hemoglobin, beta adult major chain	AK147001|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr13_-_89881914_89881931	1.64713	HOX{A6,A7,B6,B7}.p2	BC096495|Vcan|13003|versican	AK165069|Vcan|13003|versican	AK034871|Vcan|13003|versican	AK014525|Vcan|13003|versican
mm9_v1_chr11_+_78640059_78640096	1.6469	HOX{A6,A7,B6,B7}.p2	AK007467|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene	AK144380|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene	NM_001076681|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene
mm9_v1_chr14_-_103381744_103381856	1.64373	HOX{A6,A7,B6,B7}.p2	BC116647|Kctd12|239217|potassium channel tetramerisation domain containing 12	BC116648|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK035535|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK172581|Kctd12|239217|potassium channel tetramerisation domain containing 12	NM_177715|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK087895|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr6_+_36338053_36338083	1.63868	HOX{A6,A7,B6,B7}.p2	BC019470|Chrm2|243764|cholinergic receptor, muscarinic 2, cardiac
mm9_v1_chr15_-_79359998_79360114	1.62338	HOX{A6,A7,B6,B7}.p2	AK079294|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK011338|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK079442|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK164451|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr18_+_37637421_37637642	1.62187	HOX{A6,A7,B6,B7}.p2	NM_053141|Pcdhb16|93887|protocadherin beta 16	AK030612|Pcdhb16|93887|protocadherin beta 16	AK036829|Pcdhb16|93887|protocadherin beta 16	BC115720|Pcdhb16|93887|protocadherin beta 16	BC116625|Pcdhb16|93887|protocadherin beta 16	AY013777|Pcdhb16|93887|protocadherin beta 16
mm9_v1_chr11_-_86539846_86539984	1.61955	HOX{A6,A7,B6,B7}.p2	AK049578|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr18_-_25637786_25637794	1.61063	HOX{A6,A7,B6,B7}.p2	AK078071|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr6_+_77193078_77193105	1.60968	HOX{A6,A7,B6,B7}.p2	AK053364|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr10_-_42722514_42722517	1.6074	HOX{A6,A7,B6,B7}.p2	AK019306|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr5_+_117864837_117864837	1.59829	HOX{A6,A7,B6,B7}.p2	DQ531035|Ksr2|333050|kinase suppressor of ras 2	NM_001114545|Ksr2|333050|kinase suppressor of ras 2
mm9_v1_chr8_+_89996675_89996716	1.59504	HOX{A6,A7,B6,B7}.p2	AK135135|Gm2694|100040294|predicted gene 2694	AK137304|Gm2694|100040294|predicted gene 2694
mm9_v1_chr14_-_73768214_73768311	1.59385	HOX{A6,A7,B6,B7}.p2	AK198503|Itm2b|16432|integral membrane protein 2B	AK197360|Itm2b|16432|integral membrane protein 2B	AB030204|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr18_+_82754829_82754843	1.58968	HOX{A6,A7,B6,B7}.p2	AK193989|Mbp|17196|myelin basic protein	AK198113|Mbp|17196|myelin basic protein	AK200233|Mbp|17196|myelin basic protein	AK200632|Mbp|17196|myelin basic protein	AK201435|Mbp|17196|myelin basic protein	AK201834|Mbp|17196|myelin basic protein	AK202354|Mbp|17196|myelin basic protein	AK209511|Mbp|17196|myelin basic protein
mm9_v1_chr6_+_121250304_121250325	1.58837	HOX{A6,A7,B6,B7}.p2	AK149557|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK002794|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK078399|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC029637|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_144512|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC023117|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
mm9_v1_chr3_-_27795287_27795289	1.5869	HOX{A6,A7,B6,B7}.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr19_-_5801766_5801972	1.58571	HOX{A6,A7,B6,B7}.p2	BC094333|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC039749|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC004722|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr14_-_78488780_78488813	1.57777	HOX{A6,A7,B6,B7}.p2	BC120488|AU021034|219170|expressed sequence AU021034	BC120490|AU021034|219170|expressed sequence AU021034	AK047611|AU021034|219170|expressed sequence AU021034	AK034132|AU021034|219170|expressed sequence AU021034	NM_177629|AU021034|219170|expressed sequence AU021034
mm9_v1_chrM_-_14069_14070	1.57753	HOX{A6,A7,B6,B7}.p2	AK138272|ND6|17722|NADH dehydrogenase subunit 6	AK140300|ND6|17722|NADH dehydrogenase subunit 6
mm9_v1_chr11_+_52202137_52202376	1.57011	HOX{A6,A7,B6,B7}.p2	AK217498|Vdac1|22333|voltage-dependent anion channel 1	AK210208|Vdac1|22333|voltage-dependent anion channel 1	AK215454|Vdac1|22333|voltage-dependent anion channel 1	AK207573|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr18_+_36440748_36440822	1.56946	HOX{A6,A7,B6,B7}.p2	NM_008989|Pura|19290|purine rich element binding protein A	U02098|Pura|19290|purine rich element binding protein A
mm9_v1_chr4_-_63707849_63707898	1.56693	HOX{A6,A7,B6,B7}.p2	D90343|Tnc|21923|tenascin C
mm9_v1_chr5_+_13399492_13399661	1.56693	HOX{A6,A7,B6,B7}.p2	AK053115|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	BC057588|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr1_-_80272987_80273120	1.56428	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_+_120674921_120674929	1.56408	HOX{A6,A7,B6,B7}.p2	AK151913|Mbnl2|105559|muscleblind-like 2	AK151926|Mbnl2|105559|muscleblind-like 2	AK151957|Mbnl2|105559|muscleblind-like 2	AK028797|Mbnl2|105559|muscleblind-like 2	AK085709|Mbnl2|105559|muscleblind-like 2	AK164372|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_-_112134984_112135004	1.55865	HOX{A6,A7,B6,B7}.p2	NM_001177616|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr2_+_162759135_162759161	1.55463	HOX{A6,A7,B6,B7}.p2	AK212807|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr3_+_129883794_129883901	1.55088	HOX{A6,A7,B6,B7}.p2	NM_029838|Col25a1|77018|collagen, type XXV, alpha 1	NM_198711|Col25a1|77018|collagen, type XXV, alpha 1	AK035562|Col25a1|77018|collagen, type XXV, alpha 1	AK085241|Col25a1|77018|collagen, type XXV, alpha 1	BC024329|Col25a1|77018|collagen, type XXV, alpha 1	BC138051|Col25a1|77018|collagen, type XXV, alpha 1
mm9_v1_chr1_-_167865030_167865141	1.5494	HOX{A6,A7,B6,B7}.p2	AJ296212|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198933|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198934|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489475|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489474|Pou2f1|18986|POU domain, class 2, transcription factor 1	X56230|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr18_+_23573939_23573956	1.54656	HOX{A6,A7,B6,B7}.p2	BC040364|Dtna|13527|dystrobrevin alpha
mm9_v1_chr12_+_53800302_53800317	1.54593	HOX{A6,A7,B6,B7}.p2	DQ233645|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr13_-_53076251_53076471	1.54286	HOX{A6,A7,B6,B7}.p2	BC031377|Nfil3|18030|nuclear factor, interleukin 3, regulated	AK087541|Nfil3|18030|nuclear factor, interleukin 3, regulated	NM_017373|Nfil3|18030|nuclear factor, interleukin 3, regulated
mm9_v1_chr17_-_34253887_34254086	1.54211	HOX{A6,A7,B6,B7}.p2	AK179882|Brd2|14312|bromodomain containing 2	AK205877|Brd2|14312|bromodomain containing 2	AK218127|Brd2|14312|bromodomain containing 2	AB212273|Brd2|14312|bromodomain containing 2	AB010248|Brd2|14312|bromodomain containing 2
mm9_v1_chr19_+_53214934_53215104	1.53766	HOX{A6,A7,B6,B7}.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr13_+_105077914_105078054	1.52977	HOX{A6,A7,B6,B7}.p2	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chr2_+_69058005_69058054	1.52794	HOX{A6,A7,B6,B7}.p2	AK148450|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	Z47787|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	BC111905|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	AK148465|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	NM_021331|G6pc2|14378|glucose-6-phosphatase, catalytic, 2
mm9_v1_chr9_-_55983967_55984081	1.52779	HOX{A6,A7,B6,B7}.p2	AK212733|Tspan3|56434|tetraspanin 3	AK206202|Tspan3|56434|tetraspanin 3	AK211000|Tspan3|56434|tetraspanin 3	AK216580|Tspan3|56434|tetraspanin 3	AK219763|Tspan3|56434|tetraspanin 3	AK219867|Tspan3|56434|tetraspanin 3	AK206891|Tspan3|56434|tetraspanin 3	AK219936|Tspan3|56434|tetraspanin 3
mm9_v1_chr1_-_193961641_193961894	1.52306	HOX{A6,A7,B6,B7}.p2	BC138938|Rcor3|214742|REST corepressor 3	BC138939|Rcor3|214742|REST corepressor 3	BC145469|Rcor3|214742|REST corepressor 3	AK203210|Rcor3|214742|REST corepressor 3	BC057141|Rcor3|214742|REST corepressor 3	NM_144814|Rcor3|214742|REST corepressor 3	BC020065|Rcor3|214742|REST corepressor 3	AK135612|Rcor3|214742|REST corepressor 3	AK155440|Rcor3|214742|REST corepressor 3
mm9_v1_chr4_+_144482722_144482729	1.5229	HOX{A6,A7,B6,B7}.p2	BC008980|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_001172424|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr3_+_20008792_20008792	1.50292	HOX{A6,A7,B6,B7}.p2	BC039796|Hltf|20585|helicase-like transcription factor
mm9_v1_chr10_+_85763294_85763302	1.49981	HOX{A6,A7,B6,B7}.p2	AK082483|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK128943|Timp3|21859|tissue inhibitor of metalloproteinase 3	AB041611|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK083905|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK147847|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr4_+_154932761_154932805	1.49462	HOX{A6,A7,B6,B7}.p2	AK194739|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK203879|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK205062|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr4_+_97444326_97444386	1.49416	HOX{A6,A7,B6,B7}.p2	BC075702|Nfia|18027|nuclear factor I/A	D90172|Nfia|18027|nuclear factor I/A
mm9_v1_chr16_-_23890909_23890942	1.49113	HOX{A6,A7,B6,B7}.p2	BC010770|Sst|20604|somatostatin	AK003014|Sst|20604|somatostatin	NM_009215|Sst|20604|somatostatin
mm9_v1_chr7_+_25292375_25292405	1.49066	HOX{A6,A7,B6,B7}.p2	AK139174|Zfp428|232969|zinc finger protein 428
mm9_v1_chr7_-_20284370_20284493	1.4849	HOX{A6,A7,B6,B7}.p2	BC083351|Apoe|11816|apolipoprotein E	BC044785|Apoe|11816|apolipoprotein E	AK149568|Apoe|11816|apolipoprotein E	BC028816|Apoe|11816|apolipoprotein E	AK010261|Apoe|11816|apolipoprotein E	AK075843|Apoe|11816|apolipoprotein E	AK131624|Apoe|11816|apolipoprotein E	AK134921|Apoe|11816|apolipoprotein E	AK148747|Apoe|11816|apolipoprotein E	AK149111|Apoe|11816|apolipoprotein E	AK159105|Apoe|11816|apolipoprotein E	AK159517|Apoe|11816|apolipoprotein E	AK150834|Apoe|11816|apolipoprotein E	AK159424|Apoe|11816|apolipoprotein E
mm9_v1_chr10_+_3366075_3366075	1.48426	HOX{A6,A7,B6,B7}.p2	AK157384|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170800|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170801|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170802|Ipcef1|320495|interaction protein for cytohesin exchange factors 1
mm9_v1_chr10_-_12581443_12581532	1.48161	HOX{A6,A7,B6,B7}.p2	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr2_-_147011990_147012137	1.47767	HOX{A6,A7,B6,B7}.p2	AK043561|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138159|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138160|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	U31566|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	AK141002|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_001077632|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_010919|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr4_-_106812064_106812078	1.45856	HOX{A6,A7,B6,B7}.p2	AK186076|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene
mm9_v1_chr2_+_121184334_121184455	1.45717	HOX{A6,A7,B6,B7}.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr13_-_40829082_40829191	1.45295	HOX{A6,A7,B6,B7}.p2	AB221578|Tcfap2a|21418|transcription factor AP-2, alpha	U17286|Tcfap2a|21418|transcription factor AP-2, alpha	AK145772|Tcfap2a|21418|transcription factor AP-2, alpha	X74216|Tcfap2a|21418|transcription factor AP-2, alpha	BC007471|Tcfap2a|21418|transcription factor AP-2, alpha	U17285|Tcfap2a|21418|transcription factor AP-2, alpha	NM_011547|Tcfap2a|21418|transcription factor AP-2, alpha
mm9_v1_chr11_+_98603041_98603154	1.43728	HOX{A6,A7,B6,B7}.p2	AK082121|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr6_+_124885783_124885933	1.43625	HOX{A6,A7,B6,B7}.p2	AK195037|Mlf2|30853|myeloid leukemia factor 2	AK209928|Mlf2|30853|myeloid leukemia factor 2	AK190409|Mlf2|30853|myeloid leukemia factor 2
mm9_v1_chr18_+_78017198_78017354	1.43013	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_184397778_184397904	1.42981	HOX{A6,A7,B6,B7}.p2	AK192389|Capn2|12334|calpain 2	AK203804|Capn2|12334|calpain 2	AK198770|Capn2|12334|calpain 2	AK203361|Capn2|12334|calpain 2
mm9_v1_chr3_+_151100845_151100914	1.42539	HOX{A6,A7,B6,B7}.p2	NM_133222|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	AF385682|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	BC017134|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1
mm9_v1_chrX_+_131291100_131291196	1.42529	HOX{A6,A7,B6,B7}.p2	NM_027870|Armcx3|71703|armadillo repeat containing, X-linked 3	AK030729|Armcx3|71703|armadillo repeat containing, X-linked 3	AK004598|Armcx3|71703|armadillo repeat containing, X-linked 3	BC051113|Armcx3|71703|armadillo repeat containing, X-linked 3	BC108360|Armcx3|71703|armadillo repeat containing, X-linked 3
mm9_v1_chr7_+_152024499_152024558	1.41798	HOX{A6,A7,B6,B7}.p2	AK133901|Fgf3|14174|fibroblast growth factor 3	X52014|Fgf3|14174|fibroblast growth factor 3	NM_008007|Fgf3|14174|fibroblast growth factor 3	BC117059|Fgf3|14174|fibroblast growth factor 3	BC117061|Fgf3|14174|fibroblast growth factor 3
mm9_v1_chr18_-_35374531_35374610	1.41757	HOX{A6,A7,B6,B7}.p2	AK043173|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046818|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK049920|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK043784|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr17_-_14831262_14831287	1.41669	HOX{A6,A7,B6,B7}.p2	NM_011581|Thbs2|21826|thrombospondin 2
mm9_v1_chr4_+_119487105_119487332	1.4161	HOX{A6,A7,B6,B7}.p2	AY454348|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	BC058336|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	NM_010657|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	AY454345|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr5_+_98609872_98610052	1.41574	HOX{A6,A7,B6,B7}.p2	AK050852|Prdm8|77630|PR domain containing 8	NM_029947|Prdm8|77630|PR domain containing 8	AK036202|Prdm8|77630|PR domain containing 8	AK044713|Prdm8|77630|PR domain containing 8	BC141020|Prdm8|77630|PR domain containing 8
mm9_v1_chr1_-_55283189_55283376	1.41097	HOX{A6,A7,B6,B7}.p2	BC026871|Rftn2|74013|raftlin family member 2	AK014318|Rftn2|74013|raftlin family member 2
mm9_v1_chr2_+_16277963_16277989	1.39766	HOX{A6,A7,B6,B7}.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr10_+_85763267_85763281	1.39599	HOX{A6,A7,B6,B7}.p2	Z30970|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr18_-_43059156_43059171	1.39355	HOX{A6,A7,B6,B7}.p2	AK079059|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr2_+_162760216_162760271	1.38839	HOX{A6,A7,B6,B7}.p2	BC029312|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr8_-_39724524_39724561	1.38314	HOX{A6,A7,B6,B7}.p2	AK048960|Sgcz|244431|sarcoglycan zeta	AK136779|Sgcz|244431|sarcoglycan zeta	NM_145841|Sgcz|244431|sarcoglycan zeta
mm9_v1_chr1_+_62749850_62750115	1.38287	HOX{A6,A7,B6,B7}.p2	NM_001077403|Nrp2|18187|neuropilin 2	NM_001077404|Nrp2|18187|neuropilin 2	NM_001077405|Nrp2|18187|neuropilin 2	NM_001077406|Nrp2|18187|neuropilin 2	NM_001077407|Nrp2|18187|neuropilin 2	NM_010939|Nrp2|18187|neuropilin 2	AK149643|Nrp2|18187|neuropilin 2	AK051873|Nrp2|18187|neuropilin 2
mm9_v1_chr18_+_38456280_38456312	1.38273	HOX{A6,A7,B6,B7}.p2	NM_001164622|Rnf14|56736|ring finger protein 14	NM_020012|Rnf14|56736|ring finger protein 14
mm9_v1_chr11_-_50108981_50109027	1.38085	HOX{A6,A7,B6,B7}.p2	AK004422|Canx|12330|calnexin
mm9_v1_chr15_-_42508294_42508522	1.3791	HOX{A6,A7,B6,B7}.p2	U83509|Angpt1|11600|angiopoietin 1	BC067410|Angpt1|11600|angiopoietin 1	NM_009640|Angpt1|11600|angiopoietin 1	AK172868|Angpt1|11600|angiopoietin 1	AK012027|Angpt1|11600|angiopoietin 1	AK088439|Angpt1|11600|angiopoietin 1
mm9_v1_chr4_+_61947463_61947577	1.37476	HOX{A6,A7,B6,B7}.p2	NM_025286|Slc31a2|20530|solute carrier family 31, member 2	AK008473|Slc31a2|20530|solute carrier family 31, member 2	BC099447|Slc31a2|20530|solute carrier family 31, member 2	AK007579|Slc31a2|20530|solute carrier family 31, member 2	AK152812|Slc31a2|20530|solute carrier family 31, member 2	AK003269|Slc31a2|20530|solute carrier family 31, member 2	AK151612|Slc31a2|20530|solute carrier family 31, member 2	BC029183|Slc31a2|20530|solute carrier family 31, member 2
mm9_v1_chr3_+_135102075_135102261	1.37194	HOX{A6,A7,B6,B7}.p2	AK169177|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK165235|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr10_-_94879369_94879430	1.36899	HOX{A6,A7,B6,B7}.p2	AK137403|Socs2|216233|suppressor of cytokine signaling 2	AK144810|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr5_-_52576002_52576142	1.36641	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_154621524_154621665	1.36225	HOX{A6,A7,B6,B7}.p2	AK209951|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK205293|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr4_-_45543623_45543714	1.35748	HOX{A6,A7,B6,B7}.p2	NM_001033306|Shb|230126|src homology 2 domain-containing transforming protein B
mm9_v1_chr10_-_36855668_36856157	1.35585	HOX{A6,A7,B6,B7}.p2	AK151646|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK153217|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr9_-_49607164_49607185	1.35013	HOX{A6,A7,B6,B7}.p2	NM_001081445|Ncam1|17967|neural cell adhesion molecule 1	NM_001113204|Ncam1|17967|neural cell adhesion molecule 1	NM_010875|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr3_-_95032589_95032623	1.34504	HOX{A6,A7,B6,B7}.p2	AK152708|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	NM_019914|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr6_-_136121885_136121906	1.33925	HOX{A6,A7,B6,B7}.p2	AK163195|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr12_+_30219769_30219800	1.33682	HOX{A6,A7,B6,B7}.p2	AK036205|Myt1l|17933|myelin transcription factor 1-like	NM_001093776|Myt1l|17933|myelin transcription factor 1-like	BC079651|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr5_-_104542598_104542621	1.33176	HOX{A6,A7,B6,B7}.p2	AK158725|Sparcl1|13602|SPARC-like 1
mm9_v1_chr18_+_37112301_37112419	1.33066	HOX{A6,A7,B6,B7}.p2	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chrX_-_69901382_69901584	1.32447	HOX{A6,A7,B6,B7}.p2	BC119317|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	BC120686|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	M86568|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK134760|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK039144|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	NM_008067|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm9_v1_chr9_-_123587923_123587963	1.3192	HOX{A6,A7,B6,B7}.p2	AJ964961|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	BC118933|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	NM_139142|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK160468|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK043297|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK080979|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK140445|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AJ428067|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A
mm9_v1_chr19_-_57271875_57272120	1.31245	HOX{A6,A7,B6,B7}.p2	AF404775|Ablim1|226251|actin-binding LIM protein 1	AK143907|Ablim1|226251|actin-binding LIM protein 1	NM_001103177|Ablim1|226251|actin-binding LIM protein 1	AK122196|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr11_+_3883638_3883715	1.31099	HOX{A6,A7,B6,B7}.p2	AK007645|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_001177703|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_016922|Gal3st1|53897|galactose-3-O-sulfotransferase 1	BC026806|Gal3st1|53897|galactose-3-O-sulfotransferase 1
mm9_v1_chr15_+_39491073_39491119	1.30501	HOX{A6,A7,B6,B7}.p2	AK054553|Rims2|116838|regulating synaptic membrane exocytosis 2	AK032619|Rims2|116838|regulating synaptic membrane exocytosis 2
mm9_v1_chr8_+_119983664_119983684	1.29938	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_73984620_73984668	1.29521	HOX{A6,A7,B6,B7}.p2	AK045148|Adamts17|233332|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17	AK053131|Adamts17|233332|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17	NM_001033877|Adamts17|233332|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17	BC141170|Adamts17|233332|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm9_v1_chr3_+_90097105_90097108	1.29369	HOX{A6,A7,B6,B7}.p2	AK141586|Gatad2b|229542|GATA zinc finger domain containing 2B
mm9_v1_chr12_+_30512469_30512567	1.28458	HOX{A6,A7,B6,B7}.p2	AK049967|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr6_+_7505070_7505199	1.28073	HOX{A6,A7,B6,B7}.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chr11_-_18918923_18918971	1.26974	HOX{A6,A7,B6,B7}.p2	AK032947|Meis1|17268|Meis homeobox 1	AK049720|Meis1|17268|Meis homeobox 1	BC023689|Meis1|17268|Meis homeobox 1	AK168684|Meis1|17268|Meis homeobox 1	AK134321|Meis1|17268|Meis homeobox 1	AK140748|Meis1|17268|Meis homeobox 1	NM_001193271|Meis1|17268|Meis homeobox 1	NM_010789|Meis1|17268|Meis homeobox 1
mm9_v1_chr7_+_77509969_77510044	1.26731	HOX{A6,A7,B6,B7}.p2	BC070425|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr16_+_44765848_44765938	1.26338	HOX{A6,A7,B6,B7}.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chr2_+_162760505_162760606	1.2559	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_-_33623273_33623276	1.25384	HOX{A6,A7,B6,B7}.p2	AK051015|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr2_+_69708777_69708824	1.25346	HOX{A6,A7,B6,B7}.p2	AK200405|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr1_+_40082201_40082235	1.25112	HOX{A6,A7,B6,B7}.p2	AK020498|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK167747|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK004047|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr5_-_92872646_92872657	1.24808	HOX{A6,A7,B6,B7}.p2	AK034388|Scarb2|12492|scavenger receptor class B, member 2
mm9_v1_chr6_+_77192839_77192971	1.24785	HOX{A6,A7,B6,B7}.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr11_+_98667577_98667599	1.24439	HOX{A6,A7,B6,B7}.p2	AK031902|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr4_+_102432879_102432915	1.24112	HOX{A6,A7,B6,B7}.p2	AK043018|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr1_-_167523348_167523717	1.24015	HOX{A6,A7,B6,B7}.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr10_+_61154744_61154819	1.23918	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_-_102453449_102453477	1.23597	HOX{A6,A7,B6,B7}.p2	AK138868|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK049798|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr11_+_29641691_29641734	1.23515	HOX{A6,A7,B6,B7}.p2	AK003859|Rtn4|68585|reticulon 4
mm9_v1_chr1_-_84741605_84741713	1.22979	HOX{A6,A7,B6,B7}.p2	BC004085|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr2_-_60589953_60589966	1.22803	HOX{A6,A7,B6,B7}.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr8_+_48072271_48072307	1.22735	HOX{A6,A7,B6,B7}.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr2_+_145686377_145686454	1.22522	HOX{A6,A7,B6,B7}.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr5_+_118292144_118292194	1.22462	HOX{A6,A7,B6,B7}.p2	BC066101|Nos1|18125|nitric oxide synthase 1, neuronal	BC083183|Nos1|18125|nitric oxide synthase 1, neuronal
mm9_v1_chr1_-_180264067_180264092	1.22215	HOX{A6,A7,B6,B7}.p2	AK190289|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr15_-_101632762_101632762	1.21421	HOX{A6,A7,B6,B7}.p2	BC067067|Krt73|223915|keratin 73	NM_212485|Krt73|223915|keratin 73
mm9_v1_chr18_+_37834003_37834149	1.20851	HOX{A6,A7,B6,B7}.p2	AY013797|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr9_-_50705585_50705617	1.20512	HOX{A6,A7,B6,B7}.p2	AK077413|Sik2|235344|salt inducible kinase 2
mm9_v1_chr2_+_135883662_135883710	1.20116	HOX{A6,A7,B6,B7}.p2	NM_029530|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr9_-_121404750_121404785	1.20041	HOX{A6,A7,B6,B7}.p2	BC028487|Cck|12424|cholecystokinin	AK002677|Cck|12424|cholecystokinin
mm9_v1_chr11_-_62206116_62206160	1.19945	HOX{A6,A7,B6,B7}.p2	AK137695|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr11_+_61298923_61298953	1.19871	HOX{A6,A7,B6,B7}.p2	NM_029568|Mfap4|76293|microfibrillar-associated protein 4	AK003537|Mfap4|76293|microfibrillar-associated protein 4	BC022666|Mfap4|76293|microfibrillar-associated protein 4
mm9_v1_chr2_-_77008655_77008700	1.1955	HOX{A6,A7,B6,B7}.p2	AK045498|Ccdc141|545428|coiled-coil domain containing 141	AK011952|Ccdc141|545428|coiled-coil domain containing 141	AK053175|Ccdc141|545428|coiled-coil domain containing 141	NM_001025576|Ccdc141|545428|coiled-coil domain containing 141	AK041121|Ccdc141|545428|coiled-coil domain containing 141
mm9_v1_chr11_+_75439670_75439831	1.19504	HOX{A6,A7,B6,B7}.p2	AK218843|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK214842|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr3_-_78949796_78949796	1.19371	HOX{A6,A7,B6,B7}.p2	BC067056|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2	NM_001099624|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr2_+_136539202_136539314	1.19369	HOX{A6,A7,B6,B7}.p2	AK138653|Snap25|20614|synaptosomal-associated protein 25	AK161896|Snap25|20614|synaptosomal-associated protein 25	M22012|Snap25|20614|synaptosomal-associated protein 25	BC018249|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr14_-_71041964_71042074	1.1921	HOX{A6,A7,B6,B7}.p2	AK082858|Fgf17|14171|fibroblast growth factor 17	BC119033|Fgf17|14171|fibroblast growth factor 17	BC144776|Fgf17|14171|fibroblast growth factor 17	AK077555|Fgf17|14171|fibroblast growth factor 17	NM_008004|Fgf17|14171|fibroblast growth factor 17
mm9_v1_chrM_-_16187_16189	1.18669	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_110798661_110798666	1.18497	HOX{A6,A7,B6,B7}.p2	AK019916|Meg3|17263|maternally expressed 3
mm9_v1_chr1_-_20608010_20608144	1.18489	HOX{A6,A7,B6,B7}.p2	AY438374|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK143992|Pkhd1|241035|polycystic kidney and hepatic disease 1	AY130764|Pkhd1|241035|polycystic kidney and hepatic disease 1	NM_153179|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK052698|Pkhd1|241035|polycystic kidney and hepatic disease 1
mm9_v1_chr11_-_115940157_115940300	1.18092	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_120807674_120807696	1.17704	HOX{A6,A7,B6,B7}.p2	AK034995|Cdh13|12554|cadherin 13	AK085939|Cdh13|12554|cadherin 13	AK029195|Cdh13|12554|cadherin 13	AK134649|Cdh13|12554|cadherin 13
mm9_v1_chr5_-_100391613_100391631	1.17666	HOX{A6,A7,B6,B7}.p2	AK012230|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr10_+_80642896_80643136	1.17404	HOX{A6,A7,B6,B7}.p2	AK210872|Eef2|13629|eukaryotic translation elongation factor 2	AK209228|Eef2|13629|eukaryotic translation elongation factor 2	AK202124|Eef2|13629|eukaryotic translation elongation factor 2	AK187806|Eef2|13629|eukaryotic translation elongation factor 2	AK193965|Eef2|13629|eukaryotic translation elongation factor 2	AK198543|Eef2|13629|eukaryotic translation elongation factor 2	AK199188|Eef2|13629|eukaryotic translation elongation factor 2	AK199799|Eef2|13629|eukaryotic translation elongation factor 2	AK203090|Eef2|13629|eukaryotic translation elongation factor 2	AK205853|Eef2|13629|eukaryotic translation elongation factor 2	AK207466|Eef2|13629|eukaryotic translation elongation factor 2	AK216165|Eef2|13629|eukaryotic translation elongation factor 2	AK216384|Eef2|13629|eukaryotic translation elongation factor 2	AK205723|Eef2|13629|eukaryotic translation elongation factor 2	AK164406|Eef2|13629|eukaryotic translation elongation factor 2	AK189872|Eef2|13629|eukaryotic translation elongation factor 2	AK195340|Eef2|13629|eukaryotic translation elongation factor 2	AK206829|Eef2|13629|eukaryotic translation elongation factor 2	AK207351|Eef2|13629|eukaryotic translation elongation factor 2	AK211185|Eef2|13629|eukaryotic translation elongation factor 2	AK217298|Eef2|13629|eukaryotic translation elongation factor 2	AK217627|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr6_-_126114938_126114977	1.1734	HOX{A6,A7,B6,B7}.p2	BC065785|Ntf3|18205|neurotrophin 3	AK132586|Ntf3|18205|neurotrophin 3	NM_001164035|Ntf3|18205|neurotrophin 3
mm9_v1_chr18_-_44821919_44821954	1.17279	HOX{A6,A7,B6,B7}.p2	AK054528|Mcc|328949|mutated in colorectal cancers	NM_001085374|Mcc|328949|mutated in colorectal cancers	AK086823|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr17_-_14831233_14831243	1.17163	HOX{A6,A7,B6,B7}.p2	AK142552|Thbs2|21826|thrombospondin 2
mm9_v1_chr16_-_85043886_85043990	1.17163	HOX{A6,A7,B6,B7}.p2	X15210|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr16_+_49913305_49913369	1.16979	HOX{A6,A7,B6,B7}.p2	AK050387|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr16_-_23988680_23988725	1.16423	HOX{A6,A7,B6,B7}.p2	D38377|Bcl6|12053|B-cell leukemia/lymphoma 6	BC052315|Bcl6|12053|B-cell leukemia/lymphoma 6	NM_009744|Bcl6|12053|B-cell leukemia/lymphoma 6	AK039228|Bcl6|12053|B-cell leukemia/lymphoma 6	AK036975|Bcl6|12053|B-cell leukemia/lymphoma 6	AK151229|Bcl6|12053|B-cell leukemia/lymphoma 6
mm9_v1_chr17_+_70318707_70318748	1.16395	HOX{A6,A7,B6,B7}.p2	AK031404|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK043418|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK043683|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK031410|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK035763|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr18_-_32109233_32109289	1.15679	HOX{A6,A7,B6,B7}.p2	BC070439|Gpr17|574402|G protein-coupled receptor 17	NM_001025381|Gpr17|574402|G protein-coupled receptor 17
mm9_v1_chr2_-_73150559_73150757	1.15507	HOX{A6,A7,B6,B7}.p2	AK006260|Cir1|66935|corepressor interacting with RBPJ, 1	BC061077|Cir1|66935|corepressor interacting with RBPJ, 1	BC094283|Cir1|66935|corepressor interacting with RBPJ, 1	BC089602|Cir1|66935|corepressor interacting with RBPJ, 1	AK008242|Cir1|66935|corepressor interacting with RBPJ, 1	BC099444|Cir1|66935|corepressor interacting with RBPJ, 1	AK131674|Cir1|66935|corepressor interacting with RBPJ, 1	NM_025854|Cir1|66935|corepressor interacting with RBPJ, 1	BC012219|Cir1|66935|corepressor interacting with RBPJ, 1
mm9_v1_chr15_-_77950450_77950459	1.14834	HOX{A6,A7,B6,B7}.p2	AK045362|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2
mm9_v1_chr5_-_24348240_24348246	1.14781	HOX{A6,A7,B6,B7}.p2	AK158213|Rheb|19744|Ras homolog enriched in brain
mm9_v1_chrX_-_18038399_18038522	1.13999	HOX{A6,A7,B6,B7}.p2	AK085770|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	BC118515|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	NM_175228|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	AK016298|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	AK163928|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene
mm9_v1_chr16_-_52268571_52268603	1.13947	HOX{A6,A7,B6,B7}.p2	AK161090|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr2_+_152987262_152987297	1.13899	HOX{A6,A7,B6,B7}.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr2_+_143371807_143372226	1.13611	HOX{A6,A7,B6,B7}.p2	AK158598|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK133620|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	NM_008792|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC057348|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK158493|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK161585|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC052013|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK039783|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	M55669|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483512|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483513|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2
mm9_v1_chr9_+_86910371_86910467	1.13121	HOX{A6,A7,B6,B7}.p2	AB212223|Ripply2|382089|ripply2 homolog (zebrafish)	NM_001037907|Ripply2|382089|ripply2 homolog (zebrafish)	AK081203|Ripply2|382089|ripply2 homolog (zebrafish)
mm9_v1_chr2_+_158235580_158235588	1.12549	HOX{A6,A7,B6,B7}.p2	NM_177658|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)
mm9_v1_chr14_-_37911383_37911496	1.1213	HOX{A6,A7,B6,B7}.p2	AF426393|Cdhr1|170677|cadherin-related family member 1	BC042454|Cdhr1|170677|cadherin-related family member 1	AK143151|Cdhr1|170677|cadherin-related family member 1	BC058270|Cdhr1|170677|cadherin-related family member 1	NM_130878|Cdhr1|170677|cadherin-related family member 1
mm9_v1_chr10_-_108447674_108447736	1.11873	HOX{A6,A7,B6,B7}.p2	BC042519|Syt1|20979|synaptotagmin I	NM_009306|Syt1|20979|synaptotagmin I
mm9_v1_chr10_-_101953046_101953066	1.11869	HOX{A6,A7,B6,B7}.p2	AF304160|Nts|67405|neurotensin	BC043024|Nts|67405|neurotensin	NM_024435|Nts|67405|neurotensin	AK017202|Nts|67405|neurotensin	AK017212|Nts|67405|neurotensin
mm9_v1_chr12_+_83717883_83718024	1.11639	HOX{A6,A7,B6,B7}.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr18_-_43219062_43219124	1.11448	HOX{A6,A7,B6,B7}.p2	BC026686|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK148956|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK013600|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	NM_028392|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr18_+_52927362_52927362	1.11116	HOX{A6,A7,B6,B7}.p2	AK132346|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	NM_026408|Sncaip|67847|synuclein, alpha interacting protein (synphilin)
mm9_v1_chr5_+_27231234_27231317	1.10846	HOX{A6,A7,B6,B7}.p2	AK051708|Dpp6|13483|dipeptidylpeptidase 6	BC085154|Dpp6|13483|dipeptidylpeptidase 6	NM_001198886|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr13_-_89881946_89882116	1.1084	HOX{A6,A7,B6,B7}.p2	BC021652|Vcan|13003|versican	AK163927|Vcan|13003|versican	AK135324|Vcan|13003|versican	AK032794|Vcan|13003|versican	NM_001081249|Vcan|13003|versican	NM_001134474|Vcan|13003|versican	NM_001134475|Vcan|13003|versican	NM_019389|Vcan|13003|versican	NM_172955|Vcan|13003|versican
mm9_v1_chr18_+_37467108_37467135	1.10083	HOX{A6,A7,B6,B7}.p2	AK036169|Pcdhb4|93875|protocadherin beta 4	AK143280|Pcdhb4|93875|protocadherin beta 4	AK160730|Pcdhb4|93875|protocadherin beta 4	NM_053129|Pcdhb4|93875|protocadherin beta 4	AK029277|Pcdhb4|93875|protocadherin beta 4	BC053098|Pcdhb4|93875|protocadherin beta 4
mm9_v1_chr17_-_91492065_91492142	1.0993	HOX{A6,A7,B6,B7}.p2	BC079893|Nrxn1|18189|neurexin I	AK005349|Nrxn1|18189|neurexin I	AK139280|Nrxn1|18189|neurexin I	AK163484|Nrxn1|18189|neurexin I	AK037724|Nrxn1|18189|neurexin I	AB093249|Nrxn1|18189|neurexin I	NM_020252|Nrxn1|18189|neurexin I	NM_177284|Nrxn1|18189|neurexin I	AK137407|Nrxn1|18189|neurexin I
mm9_v1_chr3_-_80606704_80606756	1.09743	HOX{A6,A7,B6,B7}.p2	AK163941|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK046861|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001039195|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001083806|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_013540|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK014389|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr12_+_8944952_8945067	1.09636	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_56825258_56825293	1.0944	HOX{A6,A7,B6,B7}.p2	X57497|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr9_-_53823107_53823121	1.09381	HOX{A6,A7,B6,B7}.p2	AK132239|Elmod1|270162|ELMO domain containing 1	NM_177769|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr14_-_104242892_104242969	1.09254	HOX{A6,A7,B6,B7}.p2	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr2_+_174167321_174167402	1.09162	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_77511607_77511666	1.09091	HOX{A6,A7,B6,B7}.p2	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr13_-_89881804_89881848	1.08804	HOX{A6,A7,B6,B7}.p2	D28599|Vcan|13003|versican	D32040|Vcan|13003|versican
mm9_v1_chr11_+_29642059_29642120	1.08632	HOX{A6,A7,B6,B7}.p2	AK213159|Rtn4|68585|reticulon 4	AK218108|Rtn4|68585|reticulon 4
mm9_v1_chr3_+_66789587_66789619	1.08622	HOX{A6,A7,B6,B7}.p2	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr11_-_106642684_106642809	1.08553	HOX{A6,A7,B6,B7}.p2	AK149022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr10_-_31410391_31410392	1.08121	HOX{A6,A7,B6,B7}.p2	AK018248|Nkain2|432450|Na+/K+ transporting ATPase interacting 2
mm9_v1_chr16_-_84955488_84955582	1.07954	HOX{A6,A7,B6,B7}.p2	AK190067|App|11820|amyloid beta (A4) precursor protein	AK194558|App|11820|amyloid beta (A4) precursor protein	AK213784|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_+_34364633_34364780	1.07923	HOX{A6,A7,B6,B7}.p2	AK009079|Dst|13518|dystonin
mm9_v1_chr10_+_115455342_115455485	1.07741	HOX{A6,A7,B6,B7}.p2	AK051719|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AK028054|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_011217|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	D31898|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	BC119230|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	BC120547|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr11_-_73137838_73138062	1.07703	HOX{A6,A7,B6,B7}.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr17_-_14831058_14831092	1.07184	HOX{A6,A7,B6,B7}.p2	BC053702|Thbs2|21826|thrombospondin 2
mm9_v1_chr19_-_34952377_34952406	1.07168	HOX{A6,A7,B6,B7}.p2	AF200357|Pank1|75735|pantothenate kinase 1	AK050222|Pank1|75735|pantothenate kinase 1	NM_023792|Pank1|75735|pantothenate kinase 1
mm9_v1_chr19_-_5801011_5801112	1.0711	HOX{A6,A7,B6,B7}.p2	AK008790|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr12_-_73509668_73509745	1.07033	HOX{A6,A7,B6,B7}.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chr12_-_105711324_105711536	1.0682	HOX{A6,A7,B6,B7}.p2	AB221548|Gsc|14836|goosecoid homeobox	Y13150|Gsc|14836|goosecoid homeobox	NM_010351|Gsc|14836|goosecoid homeobox	Y13149|Gsc|14836|goosecoid homeobox	X99239|Gsc|14836|goosecoid homeobox
mm9_v1_chr19_+_43514902_43514932	1.06794	HOX{A6,A7,B6,B7}.p2	NM_031396|Cnnm1|83674|cyclin M1
mm9_v1_chr11_+_3230733_3230843	1.06762	HOX{A6,A7,B6,B7}.p2	NM_178149|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK028419|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK029304|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK154842|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK005141|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK160300|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528081|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC055920|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC079641|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528078|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC028479|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1
mm9_v1_chr12_+_37040755_37040991	1.06036	HOX{A6,A7,B6,B7}.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr17_+_71553920_71554003	1.05889	HOX{A6,A7,B6,B7}.p2	AK165218|Lpin2|64898|lipin 2	AK050018|Lpin2|64898|lipin 2	NM_001164885|Lpin2|64898|lipin 2
mm9_v1_chrX_+_166123130_166123181	1.05842	HOX{A6,A7,B6,B7}.p2	AK160120|Mid1|17318|midline 1	NM_010797|Mid1|17318|midline 1	Y14848|Mid1|17318|midline 1
mm9_v1_chr5_+_35341726_35341726	1.05538	HOX{A6,A7,B6,B7}.p2	AK014569|Rgs12|71729|regulator of G-protein signaling 12	AK161129|Rgs12|71729|regulator of G-protein signaling 12	NM_001163512|Rgs12|71729|regulator of G-protein signaling 12
mm9_v1_chr7_+_110486525_110486569	1.0546	HOX{A6,A7,B6,B7}.p2	BC141003|Olfr599|258726|olfactory receptor 599	NM_146731|Olfr599|258726|olfactory receptor 599
mm9_v1_chr9_+_44925922_44925963	1.0542	HOX{A6,A7,B6,B7}.p2	NM_001014761|Scn2b|72821|sodium channel, voltage-gated, type II, beta	AB118947|Scn2b|72821|sodium channel, voltage-gated, type II, beta	BC092225|Scn2b|72821|sodium channel, voltage-gated, type II, beta
mm9_v1_chr10_+_119256444_119256567	1.04715	HOX{A6,A7,B6,B7}.p2	BC067398|Grip1|74053|glutamate receptor interacting protein 1	AK039673|Grip1|74053|glutamate receptor interacting protein 1	AB051560|Grip1|74053|glutamate receptor interacting protein 1	AB051561|Grip1|74053|glutamate receptor interacting protein 1	NM_028736|Grip1|74053|glutamate receptor interacting protein 1	NM_130891|Grip1|74053|glutamate receptor interacting protein 1
mm9_v1_chr16_+_23107828_23107844	1.04698	HOX{A6,A7,B6,B7}.p2	X12507|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK076509|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK132969|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK165898|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK088669|Eif4a2|13682|eukaryotic translation initiation factor 4A2	BC094422|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr12_+_101447480_101447584	1.04601	HOX{A6,A7,B6,B7}.p2	BC021618|Calm1|12313|calmodulin 1
mm9_v1_chrX_+_130829929_130829942	1.04447	HOX{A6,A7,B6,B7}.p2	AK005180|Tmem35|67564|transmembrane protein 35	AK018535|Tmem35|67564|transmembrane protein 35	AK043881|Tmem35|67564|transmembrane protein 35	AK042538|Tmem35|67564|transmembrane protein 35
mm9_v1_chr3_+_144260300_144260351	1.0441	HOX{A6,A7,B6,B7}.p2	AK205282|Sep15|93684|selenoprotein	AK213933|Sep15|93684|selenoprotein	AK218207|Sep15|93684|selenoprotein
mm9_v1_chr10_+_39089853_39089891	1.04294	HOX{A6,A7,B6,B7}.p2	M27266|Fyn|14360|Fyn proto-oncogene	U70324|Fyn|14360|Fyn proto-oncogene
mm9_v1_chr8_+_89996742_89996746	1.03802	HOX{A6,A7,B6,B7}.p2	AK144513|Gm2694|100040294|predicted gene 2694
mm9_v1_chr13_-_8870975_8870975	1.03283	HOX{A6,A7,B6,B7}.p2	NM_001039388|Wdr37|207615|WD repeat domain 37
mm9_v1_chr10_+_98725871_98725972	1.02959	HOX{A6,A7,B6,B7}.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr17_-_46817717_46817797	1.0288	HOX{A6,A7,B6,B7}.p2	AJ278127|Klhdc3|71765|kelch domain containing 3	AK170623|Klhdc3|71765|kelch domain containing 3	AB053465|Klhdc3|71765|kelch domain containing 3	AK079082|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr5_-_107003702_107003736	1.02671	HOX{A6,A7,B6,B7}.p2	AK087483|Gm8350|666892|predicted gene 8350
mm9_v1_chr11_+_100442602_100442668	1.02255	HOX{A6,A7,B6,B7}.p2	AK190081|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	AK211066|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr3_+_107989221_107989318	1.0196	HOX{A6,A7,B6,B7}.p2	AK173118|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_001004293|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_146137|Amigo1|229715|adhesion molecule with Ig like domain 1	BC022907|Amigo1|229715|adhesion molecule with Ig like domain 1	AK035960|Amigo1|229715|adhesion molecule with Ig like domain 1	BC010598|Amigo1|229715|adhesion molecule with Ig like domain 1
mm9_v1_chr14_+_26484518_26484659	1.0194	HOX{A6,A7,B6,B7}.p2	AK132106|Gm10397|100038401|predicted gene 10397
mm9_v1_chr9_-_62644026_62644272	1.01838	HOX{A6,A7,B6,B7}.p2	AK078303|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK160393|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr5_-_5265598_5265717	1.0157	HOX{A6,A7,B6,B7}.p2	AK087398|Cdk14|18647|cyclin-dependent kinase 14	AK165149|Cdk14|18647|cyclin-dependent kinase 14	U62391|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr1_-_175297778_175297829	1.00494	HOX{A6,A7,B6,B7}.p2	AK036352|Cadm3|94332|cell adhesion molecule 3	AK053077|Cadm3|94332|cell adhesion molecule 3	AK038917|Cadm3|94332|cell adhesion molecule 3	NM_053199|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr8_+_59934719_59934875	1.00092	HOX{A6,A7,B6,B7}.p2	AJ223206|Scrg1|20284|scrapie responsive gene 1	NM_009136|Scrg1|20284|scrapie responsive gene 1	BC058532|Scrg1|20284|scrapie responsive gene 1	AK046213|Scrg1|20284|scrapie responsive gene 1
mm9_v1_chr6_-_145813859_145813899	0.996759	HOX{A6,A7,B6,B7}.p2	AB044090|Bhlhe41|79362|basic helix-loop-helix family, member e41	NM_024469|Bhlhe41|79362|basic helix-loop-helix family, member e41	BC023231|Bhlhe41|79362|basic helix-loop-helix family, member e41	BC051555|Bhlhe41|79362|basic helix-loop-helix family, member e41	BC037742|Bhlhe41|79362|basic helix-loop-helix family, member e41
mm9_v1_chr4_-_34754469_34754554	0.996341	HOX{A6,A7,B6,B7}.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chr3_-_127111869_127111953	0.996213	HOX{A6,A7,B6,B7}.p2	AK047866|Ank2|109676|ankyrin 2, brain	AK084070|Ank2|109676|ankyrin 2, brain	AK036179|Ank2|109676|ankyrin 2, brain	AK166115|Ank2|109676|ankyrin 2, brain	AK046947|Ank2|109676|ankyrin 2, brain
mm9_v1_chr2_+_106533281_106533425	0.994398	HOX{A6,A7,B6,B7}.p2	AK165186|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr3_+_89866717_89866721	0.989535	HOX{A6,A7,B6,B7}.p2	AK007060|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene	NM_028567|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene	BC048560|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene
mm9_v1_chr5_-_115119973_115120071	0.988974	HOX{A6,A7,B6,B7}.p2	AK189496|Gltp|56356|glycolipid transfer protein
mm9_v1_chr3_+_68376289_68376313	0.98864	HOX{A6,A7,B6,B7}.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr1_+_174271397_174271531	0.988334	HOX{A6,A7,B6,B7}.p2	BC099932|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AK044640|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AB039879|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	BC141088|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AF322631|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr4_-_53172748_53172872	0.985978	HOX{A6,A7,B6,B7}.p2	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr10_-_88067758_88067896	0.982608	HOX{A6,A7,B6,B7}.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr18_+_61747381_61747495	0.981557	HOX{A6,A7,B6,B7}.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr10_-_40021983_40022002	0.980664	HOX{A6,A7,B6,B7}.p2	AK146840|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK166187|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK168165|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK171238|Amd1|11702|S-adenosylmethionine decarboxylase 1	D12780|Amd1|11702|S-adenosylmethionine decarboxylase 1	NM_007444|Amd2|100041585|S-adenosylmethionine decarboxylase 2	NM_009665|Amd1|11702|S-adenosylmethionine decarboxylase 1
mm9_v1_chr10_-_94879435_94879509	0.980025	HOX{A6,A7,B6,B7}.p2	AK160537|Socs2|216233|suppressor of cytokine signaling 2	AK162591|Socs2|216233|suppressor of cytokine signaling 2	BC106153|Socs2|216233|suppressor of cytokine signaling 2	NM_007706|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr18_+_37607310_37607496	0.979695	HOX{A6,A7,B6,B7}.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr2_+_55288297_55288380	0.97923	HOX{A6,A7,B6,B7}.p2	BC068167|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3
mm9_v1_chr9_-_42776275_42776291	0.976992	HOX{A6,A7,B6,B7}.p2	AK162687|Arhgef12|69632|Rho guanine nucleotide exchange factor (GEF) 12
mm9_v1_chr7_+_127821167_127821282	0.975733	HOX{A6,A7,B6,B7}.p2	BC030336|BC030336|233812|cDNA sequence BC030336	AK052350|BC030336|233812|cDNA sequence BC030336
mm9_v1_chr8_+_81552335_81552485	0.972439	HOX{A6,A7,B6,B7}.p2	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr18_+_37866747_37866882	0.97132	HOX{A6,A7,B6,B7}.p2	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr10_-_86956393_86956406	0.970324	HOX{A6,A7,B6,B7}.p2	AK141866|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	AK143210|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	NM_008553|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)
mm9_v1_chr10_-_128356215_128356352	0.969648	HOX{A6,A7,B6,B7}.p2	AF013288|Rdh5|19682|retinol dehydrogenase 5	BC021372|Rdh5|19682|retinol dehydrogenase 5	AF033196|Rdh5|19682|retinol dehydrogenase 5	AK033063|Rdh5|19682|retinol dehydrogenase 5	AK135139|Rdh5|19682|retinol dehydrogenase 5	NM_134006|Rdh5|19682|retinol dehydrogenase 5
mm9_v1_chr11_-_3995299_3995466	0.968861	HOX{A6,A7,B6,B7}.p2	AK167990|Mtfp1|67900|mitochondrial fission process 1	AK006148|Mtfp1|67900|mitochondrial fission process 1	BC058737|Mtfp1|67900|mitochondrial fission process 1	AK010971|Mtfp1|67900|mitochondrial fission process 1	AK012058|Mtfp1|67900|mitochondrial fission process 1	AK078381|Mtfp1|67900|mitochondrial fission process 1	NM_026443|Mtfp1|67900|mitochondrial fission process 1
mm9_v1_chr8_+_28164658_28164830	0.968769	HOX{A6,A7,B6,B7}.p2	AK219818|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr3_-_117063317_117063389	0.964141	HOX{A6,A7,B6,B7}.p2	BC082323|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137701|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137702|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK129149|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr2_-_155979971_155980032	0.963651	HOX{A6,A7,B6,B7}.p2	AK046526|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr10_-_88875526_88875657	0.962637	HOX{A6,A7,B6,B7}.p2	AK171905|Gas2l3|237436|growth arrest-specific 2 like 3	AK136819|Gas2l3|237436|growth arrest-specific 2 like 3
mm9_v1_chr2_+_136539143_136539198	0.961449	HOX{A6,A7,B6,B7}.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr10_+_78243239_78243246	0.956145	HOX{A6,A7,B6,B7}.p2	AK159197|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	NM_009200|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	D83262|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
mm9_v1_chr2_-_32286633_32286688	0.951094	HOX{A6,A7,B6,B7}.p2	BC066998|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164358|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chrX_+_98494487_98494551	0.950747	HOX{A6,A7,B6,B7}.p2	NM_172932|Nlgn3|245537|neuroligin 3	AK039018|Nlgn3|245537|neuroligin 3
mm9_v1_chr1_+_44040367_44040379	0.950472	HOX{A6,A7,B6,B7}.p2	AK214518|Tpp2|22019|tripeptidyl peptidase II
mm9_v1_chr2_-_113839354_113839354	0.949976	HOX{A6,A7,B6,B7}.p2	BC058595|Gjd2|14617|gap junction protein, delta 2	NM_010290|Gjd2|14617|gap junction protein, delta 2
mm9_v1_chr6_+_143156520_143156614	0.949215	HOX{A6,A7,B6,B7}.p2	AK004338|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr18_-_62901040_62901040	0.948724	HOX{A6,A7,B6,B7}.p2	AK139149|Spink13|100038417|serine peptidase inhibitor, Kazal type 13	NM_001168423|Spink13|100038417|serine peptidase inhibitor, Kazal type 13
mm9_v1_chr7_-_106289635_106289638	0.948604	HOX{A6,A7,B6,B7}.p2	AK044129|Uvrag|78610|UV radiation resistance associated gene	AK089900|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr10_+_73284612_73284690	0.948065	HOX{A6,A7,B6,B7}.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr3_-_143868114_143868170	0.946136	HOX{A6,A7,B6,B7}.p2	AK033097|Lmo4|16911|LIM domain only 4	AK159590|Lmo4|16911|LIM domain only 4
mm9_v1_chr13_+_55827167_55827225	0.945485	HOX{A6,A7,B6,B7}.p2	AK209800|Txndc15|69672|thioredoxin domain containing 15	AK213704|Txndc15|69672|thioredoxin domain containing 15	AK206830|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr4_+_6321713_6321979	0.943303	HOX{A6,A7,B6,B7}.p2	AK213873|Sdcbp|53378|syndecan binding protein
mm9_v1_chr1_-_175266945_175266952	0.941916	HOX{A6,A7,B6,B7}.p2	AK031927|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr4_+_21775172_21775224	0.94175	HOX{A6,A7,B6,B7}.p2	AK162695|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK012036|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK031964|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK017507|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK020035|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK081407|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK083021|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK160288|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC060111|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr11_+_75578548_75578573	0.941592	HOX{A6,A7,B6,B7}.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr1_-_175263540_175263633	0.939697	HOX{A6,A7,B6,B7}.p2	AY289754|Darc|13349|Duffy blood group, chemokine receptor	AY291295|Darc|13349|Duffy blood group, chemokine receptor	AF016584|Darc|13349|Duffy blood group, chemokine receptor	BC005583|Darc|13349|Duffy blood group, chemokine receptor	AF109159|Darc|13349|Duffy blood group, chemokine receptor	NM_010045|Darc|13349|Duffy blood group, chemokine receptor
mm9_v1_chrX_+_45976982_45977308	0.938297	HOX{A6,A7,B6,B7}.p2	NM_001166450|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	BC048692|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155812|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155813|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr13_+_54203236_54203344	0.938118	HOX{A6,A7,B6,B7}.p2	AK048238|Sfxn1|14057|sideroflexin 1
mm9_v1_chr15_+_39490991_39491064	0.937754	HOX{A6,A7,B6,B7}.p2	AK148339|Rims2|116838|regulating synaptic membrane exocytosis 2
mm9_v1_chr12_-_11443284_11443537	0.936827	HOX{A6,A7,B6,B7}.p2	BC046226|Vsnl1|26950|visinin-like 1	AK144454|Vsnl1|26950|visinin-like 1	AK160224|Vsnl1|26950|visinin-like 1	AJ489331|Vsnl1|26950|visinin-like 1	NM_012038|Vsnl1|26950|visinin-like 1
mm9_v1_chr7_-_87857062_87857123	0.935485	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_99236350_99236367	0.934677	HOX{A6,A7,B6,B7}.p2	AK206236|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chrX_+_34142137_34142199	0.933138	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_75073816_75073896	0.932536	HOX{A6,A7,B6,B7}.p2	AF034746|Lnx1|16924|ligand of numb-protein X 1	BC139771|Lnx1|16924|ligand of numb-protein X 1	AK044127|Lnx1|16924|ligand of numb-protein X 1	BC040367|Lnx1|16924|ligand of numb-protein X 1	AK161194|Lnx1|16924|ligand of numb-protein X 1	AK138326|Lnx1|16924|ligand of numb-protein X 1	NM_001159578|Lnx1|16924|ligand of numb-protein X 1	NM_001159579|Lnx1|16924|ligand of numb-protein X 1	NM_001159580|Lnx1|16924|ligand of numb-protein X 1	NM_010727|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr4_-_109337891_109337976	0.932365	HOX{A6,A7,B6,B7}.p2	AK003933|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	BC027026|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	NM_007671|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
mm9_v1_chr19_+_26681759_26681957	0.930479	HOX{A6,A7,B6,B7}.p2	AK147322|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr2_+_118489015_118489059	0.929688	HOX{A6,A7,B6,B7}.p2	AK158913|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK158944|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr2_-_60801248_60801283	0.927215	HOX{A6,A7,B6,B7}.p2	BC016501|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK147109|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_020296|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr18_+_33098914_33099011	0.927142	HOX{A6,A7,B6,B7}.p2	AK043114|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	X58995|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr18_+_69843588_69843609	0.927091	HOX{A6,A7,B6,B7}.p2	AK017365|Tcf4|21413|transcription factor 4
mm9_v1_chr12_-_81361077_81361181	0.926962	HOX{A6,A7,B6,B7}.p2	DQ288940|Actn1|109711|actinin, alpha 1
mm9_v1_chr10_-_126626878_126627109	0.926882	HOX{A6,A7,B6,B7}.p2	AK158684|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_001166413|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AF487515|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AK010452|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	BC041113|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_028027|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25
mm9_v1_chr11_-_73138102_73138139	0.924134	HOX{A6,A7,B6,B7}.p2	BC024934|Aspa|11484|aspartoacylase	AK002859|Aspa|11484|aspartoacylase	AK008354|Aspa|11484|aspartoacylase	NM_023113|Aspa|11484|aspartoacylase
mm9_v1_chr1_+_9591347_9591354	0.919694	HOX{A6,A7,B6,B7}.p2	AK043759|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene	NM_178399|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chrX_-_35605544_35605615	0.918653	HOX{A6,A7,B6,B7}.p2	BC062956|Fam70a|245386|family with sequence similarity 70, member A	AK077178|Fam70a|245386|family with sequence similarity 70, member A	AK078264|Fam70a|245386|family with sequence similarity 70, member A	AK041985|Fam70a|245386|family with sequence similarity 70, member A	AK045375|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr7_-_86531587_86531645	0.911712	HOX{A6,A7,B6,B7}.p2	BC016268|Rlbp1|19771|retinaldehyde binding protein 1	AK014227|Rlbp1|19771|retinaldehyde binding protein 1
mm9_v1_chr4_-_118954780_118955048	0.908593	HOX{A6,A7,B6,B7}.p2	AK213887|Ybx1|22608|Y box protein 1	AK208509|Ybx1|22608|Y box protein 1	AK212502|Ybx1|22608|Y box protein 1
mm9_v1_chr6_-_115201866_115201882	0.906975	HOX{A6,A7,B6,B7}.p2	AK079347|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK140367|Timp4|110595|tissue inhibitor of metalloproteinase 4	NM_080639|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr3_+_138114362_138114455	0.906004	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_-_50247306_50247534	0.903759	HOX{A6,A7,B6,B7}.p2	AK162233|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK170568|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141402|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141408|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AB022345|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766236|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766237|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK165599|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089202|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037742|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK076322|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK163168|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171252|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171327|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089283|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171192|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037490|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	NM_011990|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm9_v1_chr8_+_26830480_26830683	0.898557	HOX{A6,A7,B6,B7}.p2	NM_028000|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC023111|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK144593|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC089556|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC062173|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK009455|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC099489|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr18_+_23573977_23574064	0.897685	HOX{A6,A7,B6,B7}.p2	AF143543|Dtna|13527|dystrobrevin alpha	AK019477|Dtna|13527|dystrobrevin alpha	AK003829|Dtna|13527|dystrobrevin alpha	AF143542|Dtna|13527|dystrobrevin alpha	AF143544|Dtna|13527|dystrobrevin alpha
mm9_v1_chr6_-_30254273_30254567	0.894385	HOX{A6,A7,B6,B7}.p2	U19854|Ube2h|22214|ubiquitin-conjugating enzyme E2H	BC008517|Ube2h|22214|ubiquitin-conjugating enzyme E2H	AK131688|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001170345|Gm2058|100039133|predicted gene 2058	AK161414|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001169576|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_009459|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr9_-_96978102_96978110	0.894371	HOX{A6,A7,B6,B7}.p2	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr2_-_71205587_71205679	0.89367	HOX{A6,A7,B6,B7}.p2	BC013845|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC060505|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK019150|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK083156|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_172436|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK147948|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK030595|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK144958|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK208043|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr18_-_14131046_14131241	0.892958	HOX{A6,A7,B6,B7}.p2	BC021376|Zfp521|225207|zinc finger protein 521	AK052655|Zfp521|225207|zinc finger protein 521	AY147406|Zfp521|225207|zinc finger protein 521	NM_145492|Zfp521|225207|zinc finger protein 521
mm9_v1_chr13_-_40825789_40825811	0.892464	HOX{A6,A7,B6,B7}.p2	U17287|Tcfap2a|21418|transcription factor AP-2, alpha	AK053704|Tcfap2a|21418|transcription factor AP-2, alpha	NM_001122948|Tcfap2a|21418|transcription factor AP-2, alpha
mm9_v1_chr7_+_100228374_100228439	0.892209	HOX{A6,A7,B6,B7}.p2	AK043957|Fam181b|58238|family with sequence similarity 181, member B	NM_021427|Fam181b|58238|family with sequence similarity 181, member B	AB041569|Fam181b|58238|family with sequence similarity 181, member B	AK140685|Fam181b|58238|family with sequence similarity 181, member B	BC043329|Fam181b|58238|family with sequence similarity 181, member B
mm9_v1_chr7_-_140179678_140180024	0.891767	HOX{A6,A7,B6,B7}.p2	AK187460|Ctbp2|13017|C-terminal binding protein 2	AK161077|Ctbp2|13017|C-terminal binding protein 2	AK198744|Ctbp2|13017|C-terminal binding protein 2	AK199198|Ctbp2|13017|C-terminal binding protein 2	AK201071|Ctbp2|13017|C-terminal binding protein 2	AK217772|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr12_-_73509537_73509656	0.888862	HOX{A6,A7,B6,B7}.p2	AB074899|Rtn1|104001|reticulon 1	CT010392|Rtn1|104001|reticulon 1	BC030455|Rtn1|104001|reticulon 1
mm9_v1_chr5_-_92483744_92484066	0.887976	HOX{A6,A7,B6,B7}.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr7_-_53922712_53922746	0.887285	HOX{A6,A7,B6,B7}.p2	AK157858|Tph1|21990|tryptophan hydroxylase 1	J04758|Tph1|21990|tryptophan hydroxylase 1	NM_001136084|Tph1|21990|tryptophan hydroxylase 1	AF273257|Tph1|21990|tryptophan hydroxylase 1	AK146134|Tph1|21990|tryptophan hydroxylase 1	AK146171|Tph1|21990|tryptophan hydroxylase 1
mm9_v1_chr2_-_151458299_151458319	0.885638	HOX{A6,A7,B6,B7}.p2	AK047595|Snph|241727|syntaphilin	AK138230|Snph|241727|syntaphilin	AK047568|Snph|241727|syntaphilin
mm9_v1_chr11_+_98603186_98603266	0.884245	HOX{A6,A7,B6,B7}.p2	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr7_-_117509277_117509385	0.883348	HOX{A6,A7,B6,B7}.p2	BC015069|Sbf2|319934|SET binding factor 2
mm9_v1_chr6_-_129422702_129422806	0.879517	HOX{A6,A7,B6,B7}.p2	AY534909|Clec7a|56644|C-type lectin domain family 7, member a	BC027742|Clec7a|56644|C-type lectin domain family 7, member a	AF262985|Clec7a|56644|C-type lectin domain family 7, member a	NM_020008|Clec7a|56644|C-type lectin domain family 7, member a
mm9_v1_chr4_+_128560786_128560863	0.877628	HOX{A6,A7,B6,B7}.p2	AK137930|Trim62|67525|tripartite motif-containing 62	AK048725|Trim62|67525|tripartite motif-containing 62
mm9_v1_chr3_+_88500529_88500661	0.877456	HOX{A6,A7,B6,B7}.p2	AK193095|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene
mm9_v1_chr7_-_88638789_88638810	0.877283	HOX{A6,A7,B6,B7}.p2	NM_021492|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit
mm9_v1_chr13_+_22135065_22135098	0.866351	HOX{A6,A7,B6,B7}.p2	NM_178198|Hist1h2bj|319183|histone cluster 1, H2bj
mm9_v1_chr18_+_34475207_34475256	0.866124	HOX{A6,A7,B6,B7}.p2	AK142170|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr19_+_8667671_8667730	0.863892	HOX{A6,A7,B6,B7}.p2	NM_001164635|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK157891|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	BC014762|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK044336|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AF078869|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8
mm9_v1_chr14_-_76956445_76956583	0.863245	HOX{A6,A7,B6,B7}.p2	AY425619|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	NM_001160326|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	AK012850|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2
mm9_v1_chr4_-_117354829_117354891	0.859646	HOX{A6,A7,B6,B7}.p2	AF438610|Dmap1|66233|DNA methyltransferase 1-associated protein 1	NM_023178|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK012055|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK005270|Dmap1|66233|DNA methyltransferase 1-associated protein 1
mm9_v1_chr11_+_69831951_69832106	0.857424	HOX{A6,A7,B6,B7}.p2	NM_001109752|Dlg4|13385|discs, large homolog 4 (Drosophila)	NM_007864|Dlg4|13385|discs, large homolog 4 (Drosophila)
mm9_v1_chr10_+_21712008_21712034	0.853691	HOX{A6,A7,B6,B7}.p2	NM_001161849|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr15_+_81767188_81767324	0.85165	HOX{A6,A7,B6,B7}.p2	NM_145473|Csdc2|105859|cold shock domain containing C2, RNA binding	AK132493|Csdc2|105859|cold shock domain containing C2, RNA binding	AK028916|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr2_+_173603706_173603746	0.849374	HOX{A6,A7,B6,B7}.p2	BC024562|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK205322|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK182293|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr6_+_88045556_88045653	0.847597	HOX{A6,A7,B6,B7}.p2	BC002175|Rpn1|103963|ribophorin I
mm9_v1_chr16_+_43619057_43619100	0.847572	HOX{A6,A7,B6,B7}.p2	AK178854|Zbtb20|56490|zinc finger and BTB domain containing 20	AK013698|Zbtb20|56490|zinc finger and BTB domain containing 20	AK036125|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr11_+_61298978_61299017	0.845763	HOX{A6,A7,B6,B7}.p2	AK075659|Mfap4|76293|microfibrillar-associated protein 4
mm9_v1_chr7_-_106289639_106289648	0.845426	HOX{A6,A7,B6,B7}.p2	AK165015|Uvrag|78610|UV radiation resistance associated gene	AK078085|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chrX_-_147091911_147092125	0.845157	HOX{A6,A7,B6,B7}.p2	AK047777|Tro|56191|trophinin	AB036783|Tro|56191|trophinin	AF288605|Tro|56191|trophinin	AF288606|Tro|56191|trophinin	NM_001002272|Tro|56191|trophinin	NM_019548|Tro|56191|trophinin	BC075630|Tro|56191|trophinin
mm9_v1_chr4_-_134081867_134082196	0.845086	HOX{A6,A7,B6,B7}.p2	AK196748|Fam54b|76824|family with sequence similarity 54, member B	AK205711|Fam54b|76824|family with sequence similarity 54, member B	AK194688|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr18_+_37849488_37849707	0.843545	HOX{A6,A7,B6,B7}.p2	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr1_-_55283618_55283625	0.842558	HOX{A6,A7,B6,B7}.p2	AK012229|Rftn2|74013|raftlin family member 2	AK031158|Rftn2|74013|raftlin family member 2	BC038341|Rftn2|74013|raftlin family member 2	NM_028713|Rftn2|74013|raftlin family member 2
mm9_v1_chr1_-_37592976_37593103	0.841846	HOX{A6,A7,B6,B7}.p2	AB053217|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A	AK163327|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A	AK082702|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A	NM_173870|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm9_v1_chr1_+_10983542_10983609	0.841721	HOX{A6,A7,B6,B7}.p2	AK138884|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	AM109952|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	NM_029525|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm9_v1_chr10_+_101974855_101975051	0.840216	HOX{A6,A7,B6,B7}.p2	AK041688|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	NM_146240|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	BC028805|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	AK086855|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	AK033464|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
mm9_v1_chr14_-_119322244_119322388	0.840116	HOX{A6,A7,B6,B7}.p2	AK129256|Dzip1|66573|DAZ interacting protein 1	NM_025943|Dzip1|66573|DAZ interacting protein 1
mm9_v1_chr6_-_124414668_124414803	0.837294	HOX{A6,A7,B6,B7}.p2	AJ278486|Clstn3|232370|calsyntenin 3	BC055054|Clstn3|232370|calsyntenin 3	AK032336|Clstn3|232370|calsyntenin 3	NM_153508|Clstn3|232370|calsyntenin 3
mm9_v1_chrX_-_157432580_157432627	0.833883	HOX{A6,A7,B6,B7}.p2	AK139220|Cdkl5|382253|cyclin-dependent kinase-like 5	AK052380|Cdkl5|382253|cyclin-dependent kinase-like 5	NM_001024624|Cdkl5|382253|cyclin-dependent kinase-like 5
mm9_v1_chr11_-_53097625_53097670	0.832944	HOX{A6,A7,B6,B7}.p2	AK179174|Hspa4|15525|heat shock protein 4
mm9_v1_chr14_+_27473359_27473404	0.828614	HOX{A6,A7,B6,B7}.p2	AK206427|Arf4|11843|ADP-ribosylation factor 4	AK210624|Arf4|11843|ADP-ribosylation factor 4
mm9_v1_chr15_+_74346853_74346867	0.828326	HOX{A6,A7,B6,B7}.p2	AK147600|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr17_+_35383898_35384035	0.822859	HOX{A6,A7,B6,B7}.p2	AK194985|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK195134|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK217230|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr7_+_26091105_26091184	0.822772	HOX{A6,A7,B6,B7}.p2	AK081054|Tmem145|330485|transmembrane protein 145	NM_183311|Tmem145|330485|transmembrane protein 145
mm9_v1_chr16_-_37385024_37385045	0.822553	HOX{A6,A7,B6,B7}.p2	AK043658|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114611|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114612|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114613|Stxbp5l|207227|syntaxin binding protein 5-like	NM_172440|Stxbp5l|207227|syntaxin binding protein 5-like
mm9_v1_chr9_-_83040061_83040223	0.822283	HOX{A6,A7,B6,B7}.p2	AK002970|Hmgn3|94353|high mobility group nucleosomal binding domain 3	BC005693|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK003272|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK153223|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_026122|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_175074|Hmgn3|94353|high mobility group nucleosomal binding domain 3
mm9_v1_chr9_-_39380841_39380898	0.818665	HOX{A6,A7,B6,B7}.p2	NM_146508|Olfr959|258501|olfactory receptor 959	BC120617|Olfr959|258501|olfactory receptor 959	BC120619|Olfr959|258501|olfactory receptor 959
mm9_v1_chr11_+_100437204_100437208	0.817905	HOX{A6,A7,B6,B7}.p2	AK041969|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	AK140280|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	NM_001146318|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr1_-_72905107_72905143	0.817724	HOX{A6,A7,B6,B7}.p2	AK011683|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr16_-_85015494_85015607	0.817704	HOX{A6,A7,B6,B7}.p2	AK209458|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr19_+_21354915_21354945	0.816656	HOX{A6,A7,B6,B7}.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr2_+_29821079_29821243	0.810063	HOX{A6,A7,B6,B7}.p2	NM_001076554|Spna2|20740|spectrin alpha 2	NM_001177667|Spna2|20740|spectrin alpha 2	NM_001177668|Spna2|20740|spectrin alpha 2	AK037683|Spna2|20740|spectrin alpha 2	AK132224|Spna2|20740|spectrin alpha 2	AK147317|Spna2|20740|spectrin alpha 2	AK085063|Spna2|20740|spectrin alpha 2	AK141149|Spna2|20740|spectrin alpha 2	BC049351|Spna2|20740|spectrin alpha 2	BC150941|Spna2|20740|spectrin alpha 2	BC158015|Spna2|20740|spectrin alpha 2	BC172095|Spna2|20740|spectrin alpha 2
mm9_v1_chr3_-_126928844_126928867	0.809514	HOX{A6,A7,B6,B7}.p2	AK044093|Ank2|109676|ankyrin 2, brain
mm9_v1_chr19_-_5093049_5093189	0.80451	HOX{A6,A7,B6,B7}.p2	AK211408|Cnih2|12794|cornichon homolog 2 (Drosophila)
mm9_v1_chr19_+_46471385_46471515	0.802678	HOX{A6,A7,B6,B7}.p2	AJ131692|Sufu|24069|suppressor of fused homolog (Drosophila)	AK016976|Sufu|24069|suppressor of fused homolog (Drosophila)	NM_001025391|Sufu|24069|suppressor of fused homolog (Drosophila)	NM_015752|Sufu|24069|suppressor of fused homolog (Drosophila)	BC048168|Sufu|24069|suppressor of fused homolog (Drosophila)	BC056997|Sufu|24069|suppressor of fused homolog (Drosophila)	AK156410|Sufu|24069|suppressor of fused homolog (Drosophila)	AF134893|Sufu|24069|suppressor of fused homolog (Drosophila)	AJ308626|Sufu|24069|suppressor of fused homolog (Drosophila)	AK015885|Sufu|24069|suppressor of fused homolog (Drosophila)	AK047603|Sufu|24069|suppressor of fused homolog (Drosophila)
mm9_v1_chr5_-_63157309_63157425	0.800674	HOX{A6,A7,B6,B7}.p2	AK037027|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	AK039153|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	AK041540|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	NM_178407|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm9_v1_chr6_-_38077491_38077509	0.800102	HOX{A6,A7,B6,B7}.p2	BC059853|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene	BC042666|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr15_+_3230053_3230123	0.799992	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_-_15222079_15222098	0.796885	HOX{A6,A7,B6,B7}.p2	NM_001142731|Kctd1|106931|potassium channel tetramerisation domain containing 1
mm9_v1_chr4_+_49072138_49072207	0.795085	HOX{A6,A7,B6,B7}.p2	AK031416|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK034251|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK087439|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK160897|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene
mm9_v1_chr18_+_42713035_42713061	0.792678	HOX{A6,A7,B6,B7}.p2	AK165067|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr18_-_47528483_47528523	0.791701	HOX{A6,A7,B6,B7}.p2	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chr9_+_111277323_111277357	0.790907	HOX{A6,A7,B6,B7}.p2	BC086653|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1
mm9_v1_chr18_+_37460452_37460636	0.790467	HOX{A6,A7,B6,B7}.p2	AK030570|Pcdhb3|93874|protocadherin beta 3	NM_053128|Pcdhb3|93874|protocadherin beta 3	BC079557|Pcdhb3|93874|protocadherin beta 3	AF326296|Pcdhb3|93874|protocadherin beta 3	AY013785|Pcdhb3|93874|protocadherin beta 3
mm9_v1_chrX_+_132424640_132424733	0.790081	HOX{A6,A7,B6,B7}.p2	AK214737|Bhlhb9|70237|basic helix-loop-helix domain containing, class B9
mm9_v1_chrX_-_57400778_57400876	0.78927	HOX{A6,A7,B6,B7}.p2	BC125435|Mcf2|109904|mcf.2 transforming sequence	AB052945|Mcf2|109904|mcf.2 transforming sequence	AB101616|Mcf2|109904|mcf.2 transforming sequence	NM_133197|Mcf2|109904|mcf.2 transforming sequence	AK032122|Mcf2|109904|mcf.2 transforming sequence
mm9_v1_chr1_-_99873641_99873694	0.785297	HOX{A6,A7,B6,B7}.p2	AK049423|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr1_-_108610520_108610597	0.784503	HOX{A6,A7,B6,B7}.p2	BC095964|Bcl2|12043|B-cell leukemia/lymphoma 2	AK042257|Bcl2|12043|B-cell leukemia/lymphoma 2
mm9_v1_chrX_-_7709907_7709983	0.783192	HOX{A6,A7,B6,B7}.p2	BC080853|Wdr13|73447|WD repeat domain 13	BC057366|Wdr13|73447|WD repeat domain 13	NM_026137|Wdr13|73447|WD repeat domain 13
mm9_v1_chr12_+_62624880_62624934	0.780646	HOX{A6,A7,B6,B7}.p2	AK220546|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr7_-_34926107_34926132	0.779091	HOX{A6,A7,B6,B7}.p2	AK218279|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK208593|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr9_-_75246118_75246213	0.777779	HOX{A6,A7,B6,B7}.p2	BC048779|Mapk6|50772|mitogen-activated protein kinase 6
mm9_v1_chr4_-_106136553_106136700	0.777588	HOX{A6,A7,B6,B7}.p2	AY273821|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9
mm9_v1_chr12_-_103057316_103057345	0.775766	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_49911557_49911575	0.775448	HOX{A6,A7,B6,B7}.p2	AK164165|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	AK021021|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr16_+_37884098_37884244	0.772054	HOX{A6,A7,B6,B7}.p2	AK052834|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr9_+_72584532_72584702	0.771618	HOX{A6,A7,B6,B7}.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr2_+_162758440_162758589	0.771524	HOX{A6,A7,B6,B7}.p2	AK051608|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr11_+_92960603_92960762	0.768885	HOX{A6,A7,B6,B7}.p2	AK036003|Car10|72605|carbonic anhydrase 10	NM_028296|Car10|72605|carbonic anhydrase 10	AK132222|Car10|72605|carbonic anhydrase 10
mm9_v1_chr14_-_62250728_62250729	0.766657	HOX{A6,A7,B6,B7}.p2	AK143097|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK162803|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK164623|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr17_-_45704908_45704999	0.76426	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_65562921_65563010	0.763994	HOX{A6,A7,B6,B7}.p2	AK084111|Chmp2b|68942|chromatin modifying protein 2B	NM_026879|Chmp2b|68942|chromatin modifying protein 2B	BC055809|Chmp2b|68942|chromatin modifying protein 2B
mm9_v1_chr4_+_49072327_49072465	0.762418	HOX{A6,A7,B6,B7}.p2	AK053451|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK087514|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AY345342|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	NM_178756|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	BC096762|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK047614|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK043762|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene
mm9_v1_chr8_+_65430028_65430291	0.760703	HOX{A6,A7,B6,B7}.p2	AJ278998|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK049843|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK220280|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK013644|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC017601|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	NM_023689|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK164338|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC053334|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm9_v1_chr16_-_91011339_91011552	0.758606	HOX{A6,A7,B6,B7}.p2	NM_001045515|Synj1|104015|synaptojanin 1	NM_001164483|Synj1|104015|synaptojanin 1
mm9_v1_chr15_-_58913543_58913652	0.75823	HOX{A6,A7,B6,B7}.p2	BC024131|Mtss1|211401|metastasis suppressor 1	AK083756|Mtss1|211401|metastasis suppressor 1	AK046628|Mtss1|211401|metastasis suppressor 1	AK129139|Mtss1|211401|metastasis suppressor 1	NM_001146180|Mtss1|211401|metastasis suppressor 1	NM_144800|Mtss1|211401|metastasis suppressor 1
mm9_v1_chr3_-_123375305_123375392	0.758067	HOX{A6,A7,B6,B7}.p2	BC112404|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC079622|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_031186|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AF221095|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm9_v1_chr6_+_134874663_134874674	0.756179	HOX{A6,A7,B6,B7}.p2	AK154276|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK169586|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr2_+_14310024_14310041	0.755707	HOX{A6,A7,B6,B7}.p2	NM_001012305|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	AK134622|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC089362|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113764|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113765|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12
mm9_v1_chr13_+_44826638_44826639	0.753829	HOX{A6,A7,B6,B7}.p2	AK147226|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr10_-_92773778_92773948	0.751064	HOX{A6,A7,B6,B7}.p2	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr3_-_37623250_37623411	0.750604	HOX{A6,A7,B6,B7}.p2	AK039231|Gm5148|381438|predicted gene 5148	AK039519|Gm5148|381438|predicted gene 5148	AK039710|Gm5148|381438|predicted gene 5148	NM_198657|Gm5148|381438|predicted gene 5148	AK045832|Gm5148|381438|predicted gene 5148
mm9_v1_chrX_+_159207693_159207814	0.748913	HOX{A6,A7,B6,B7}.p2	AK206156|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr13_-_58494637_58494692	0.748009	HOX{A6,A7,B6,B7}.p2	AK207611|Hnrnpk|15387|heterogeneous nuclear ribonucleoprotein K
mm9_v1_chr7_+_62090614_62090614	0.747013	HOX{A6,A7,B6,B7}.p2	AY164459|Luzp2|233271|leucine zipper protein 2	NM_178705|Luzp2|233271|leucine zipper protein 2
mm9_v1_chr14_-_55400722_55400814	0.740114	HOX{A6,A7,B6,B7}.p2	BC059004|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	NM_016972|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	AK044620|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm9_v1_chr8_+_42416046_42416071	0.738847	HOX{A6,A7,B6,B7}.p2	AK040482|Pcm1|18536|pericentriolar material 1
mm9_v1_chr5_+_27588579_27588623	0.736578	HOX{A6,A7,B6,B7}.p2	BC048383|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr7_-_110976314_110976437	0.736171	HOX{A6,A7,B6,B7}.p2	AB020013|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020014|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB020015|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020016|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB020017|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB364477|Hbb-b1|15129|hemoglobin, beta adult major chain	AB364478|Hbb-b2|15130|hemoglobin, beta adult minor chain	AF149782|Hbb-b2|15130|hemoglobin, beta adult minor chain
mm9_v1_chr10_+_23908526_23908598	0.733723	HOX{A6,A7,B6,B7}.p2	AK198523|Stx7|53331|syntaxin 7
mm9_v1_chr9_-_40965718_40965879	0.732902	HOX{A6,A7,B6,B7}.p2	AK034450|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AK151895|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AK152013|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AK154576|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B
mm9_v1_chr7_-_106289616_106289631	0.731913	HOX{A6,A7,B6,B7}.p2	BC034176|Uvrag|78610|UV radiation resistance associated gene	AK020590|Uvrag|78610|UV radiation resistance associated gene	AK043084|Uvrag|78610|UV radiation resistance associated gene	AK165185|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr1_+_88024759_88024856	0.730887	HOX{A6,A7,B6,B7}.p2	BC002203|Psmd1|70247|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm9_v1_chr13_+_24893310_24893891	0.730437	HOX{A6,A7,B6,B7}.p2	AK035718|BC005537|79555|cDNA sequence BC005537	NM_024473|BC005537|79555|cDNA sequence BC005537	AK078765|BC005537|79555|cDNA sequence BC005537	BC005537|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr1_-_157264358_157264387	0.729675	HOX{A6,A7,B6,B7}.p2	HQ022853|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131096|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131098|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131102|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF198104|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ022845|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323679|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323680|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr8_-_30330079_30330107	0.729366	HOX{A6,A7,B6,B7}.p2	AJ487854|Unc5d|210801|unc-5 homolog D (C. elegans)	NM_153135|Unc5d|210801|unc-5 homolog D (C. elegans)
mm9_v1_chr8_+_113245378_113245384	0.727753	HOX{A6,A7,B6,B7}.p2	BC060632|Mtss1l|244654|metastasis suppressor 1-like	NM_198625|Mtss1l|244654|metastasis suppressor 1-like
mm9_v1_chr19_+_24748487_24748497	0.718007	HOX{A6,A7,B6,B7}.p2	AK086895|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	AK142952|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	BC087877|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	AK143762|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	NM_183160|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene
mm9_v1_chr17_-_35183469_35183583	0.716925	HOX{A6,A7,B6,B7}.p2	BC030034|Msh5|17687|mutS homolog 5 (E. coli)	BC141113|Msh5|17687|mutS homolog 5 (E. coli)	BC145406|Msh5|17687|mutS homolog 5 (E. coli)	BC145407|Msh5|17687|mutS homolog 5 (E. coli)	NM_013600|Msh5|17687|mutS homolog 5 (E. coli)	AF146227|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr14_-_54873516_54873521	0.713303	HOX{A6,A7,B6,B7}.p2	U22107|Dad1|13135|defender against cell death 1
mm9_v1_chr19_-_55201631_55201725	0.710915	HOX{A6,A7,B6,B7}.p2	AK137067|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr17_+_74154214_74154436	0.709563	HOX{A6,A7,B6,B7}.p2	AK051717|Ehd3|57440|EH-domain containing 3	AF506002|Ehd3|57440|EH-domain containing 3	BC046596|Ehd3|57440|EH-domain containing 3
mm9_v1_chr1_+_17135421_17135611	0.709261	HOX{A6,A7,B6,B7}.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr8_+_127316918_127316991	0.708946	HOX{A6,A7,B6,B7}.p2	AK051455|Trim67|330863|tripartite motif-containing 67	NM_198632|Trim67|330863|tripartite motif-containing 67	BC094596|Trim67|330863|tripartite motif-containing 67
mm9_v1_chr19_+_23240506_23240595	0.701835	HOX{A6,A7,B6,B7}.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr9_-_100386803_100386891	0.701624	HOX{A6,A7,B6,B7}.p2	BC107263|Il20rb|213208|interleukin 20 receptor beta	BC107264|Il20rb|213208|interleukin 20 receptor beta	BC148190|Il20rb|213208|interleukin 20 receptor beta	NM_001033543|Il20rb|213208|interleukin 20 receptor beta
mm9_v1_chr10_+_85763303_85763334	0.696679	HOX{A6,A7,B6,B7}.p2	BC014713|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr8_+_46744023_46744252	0.696672	HOX{A6,A7,B6,B7}.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr10_+_127931369_127931415	0.696244	HOX{A6,A7,B6,B7}.p2	AK017625|Myl6b|216459|myosin, light polypeptide 6B
mm9_v1_chr18_+_37673305_37673473	0.693803	HOX{A6,A7,B6,B7}.p2	AK134846|Pcdhb21|93892|protocadherin beta 21	NM_053146|Pcdhb21|93892|protocadherin beta 21	BC138121|Pcdhb21|93892|protocadherin beta 21	BC138122|Pcdhb21|93892|protocadherin beta 21	AF326314|Pcdhb21|93892|protocadherin beta 21	AY013783|Pcdhb21|93892|protocadherin beta 21
mm9_v1_chr8_-_118231677_118231736	0.692175	HOX{A6,A7,B6,B7}.p2	S74567|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	AK019255|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr15_+_101042440_101042460	0.691837	HOX{A6,A7,B6,B7}.p2	AK078525|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr1_+_174051888_174051985	0.689831	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_+_21513864_21513981	0.688544	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_95390211_95390302	0.688087	HOX{A6,A7,B6,B7}.p2	AK179363|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene
mm9_v1_chr7_-_109907908_109907984	0.687679	HOX{A6,A7,B6,B7}.p2	AK014616|Olfr78|170639|olfactory receptor 78	AK028467|Olfr78|170639|olfactory receptor 78	AK036356|Olfr78|170639|olfactory receptor 78	NM_001168503|Olfr78|170639|olfactory receptor 78	NM_130866|Olfr78|170639|olfactory receptor 78
mm9_v1_chr10_-_128082881_128083048	0.6876	HOX{A6,A7,B6,B7}.p2	AK089522|Ikzf4|22781|IKAROS family zinc finger 4	AK170453|Ikzf4|22781|IKAROS family zinc finger 4	NM_011772|Ikzf4|22781|IKAROS family zinc finger 4
mm9_v1_chr11_-_41996099_41996133	0.687092	HOX{A6,A7,B6,B7}.p2	M63436|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	BC132331|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	BC137733|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr11_+_85322997_85323115	0.685652	HOX{A6,A7,B6,B7}.p2	AK192083|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr8_+_119983566_119983649	0.682062	HOX{A6,A7,B6,B7}.p2	AK049761|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr10_+_115580947_115580958	0.681187	HOX{A6,A7,B6,B7}.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr10_+_84849558_84849599	0.680249	HOX{A6,A7,B6,B7}.p2	BC096535|Btbd11|74007|BTB (POZ) domain containing 11	NM_028709|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr9_+_72596925_72596929	0.678087	HOX{A6,A7,B6,B7}.p2	AK195685|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr1_-_64167574_64167617	0.671899	HOX{A6,A7,B6,B7}.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr14_+_84843366_84843370	0.670097	HOX{A6,A7,B6,B7}.p2	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr4_-_86873866_86873867	0.665322	HOX{A6,A7,B6,B7}.p2	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr2_+_158436493_158436936	0.662789	HOX{A6,A7,B6,B7}.p2	AY578289|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	NM_009508|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	BC052020|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163754|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK140468|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163661|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AJ001598|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1
mm9_v1_chr1_-_170085342_170085390	0.662759	HOX{A6,A7,B6,B7}.p2	AK083616|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr15_-_103278889_103278900	0.660372	HOX{A6,A7,B6,B7}.p2	BC048502|BC048502|223927|cDNA sequence BC048502	NM_177631|BC048502|223927|cDNA sequence BC048502	AK131692|BC048502|223927|cDNA sequence BC048502
mm9_v1_chr9_-_21820860_21820861	0.65979	HOX{A6,A7,B6,B7}.p2	AK134781|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr5_-_28564412_28564412	0.659727	HOX{A6,A7,B6,B7}.p2	AK035828|Cnpy1|269637|canopy 1 homolog (zebrafish)	NM_175651|Cnpy1|269637|canopy 1 homolog (zebrafish)
mm9_v1_chr10_-_127930880_127930955	0.658218	HOX{A6,A7,B6,B7}.p2	BC026760|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	NM_010860|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	BC092214|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	BC081470|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	BC089485|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK143885|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK167106|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK167859|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK168869|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK167191|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK168450|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
mm9_v1_chr18_-_34738725_34738759	0.657699	HOX{A6,A7,B6,B7}.p2	AK006111|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC049625|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK131722|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_080637|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr18_-_25637339_25637341	0.656982	HOX{A6,A7,B6,B7}.p2	AK038871|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr6_+_141472906_141473070	0.655658	HOX{A6,A7,B6,B7}.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr11_-_116713389_116713469	0.655523	HOX{A6,A7,B6,B7}.p2	AF250132|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr19_-_40588255_40588287	0.655396	HOX{A6,A7,B6,B7}.p2	AK166943|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr14_+_32842174_32842414	0.653062	HOX{A6,A7,B6,B7}.p2	AK019470|Galntl2|78754|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2	BC133711|Galntl2|78754|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2	NM_030166|Galntl2|78754|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2	AK163883|Galntl2|78754|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2
mm9_v1_chr7_+_31092787_31092817	0.650851	HOX{A6,A7,B6,B7}.p2	BC058124|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr2_-_101489613_101489698	0.649684	HOX{A6,A7,B6,B7}.p2	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr16_-_21333381_21333436	0.649268	HOX{A6,A7,B6,B7}.p2	AK018285|Magef1|76222|melanoma antigen family F, 1
mm9_v1_chr10_+_20059547_20059574	0.647736	HOX{A6,A7,B6,B7}.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr3_-_142456600_142456910	0.646972	HOX{A6,A7,B6,B7}.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr19_-_37250472_37250552	0.646361	HOX{A6,A7,B6,B7}.p2	AK147243|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr8_-_101940218_101940356	0.646056	HOX{A6,A7,B6,B7}.p2	BC060200|Cdh8|12564|cadherin 8	BC057581|Cdh8|12564|cadherin 8	AK044046|Cdh8|12564|cadherin 8	AK139334|Cdh8|12564|cadherin 8	AK083092|Cdh8|12564|cadherin 8	AK041720|Cdh8|12564|cadherin 8	AK086711|Cdh8|12564|cadherin 8	NM_001039154|Cdh8|12564|cadherin 8	NM_007667|Cdh8|12564|cadherin 8
mm9_v1_chr7_-_29185621_29185738	0.644508	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_+_21879356_21879395	0.644331	HOX{A6,A7,B6,B7}.p2	AK076671|Hist1h2bp|319188|histone cluster 1, H2bp	BC061044|Hist1h2bp|319188|histone cluster 1, H2bp	NM_178202|Hist1h2bp|319188|histone cluster 1, H2bp	M25487|Hist1h2bp|319188|histone cluster 1, H2bp
mm9_v1_chr14_-_98568962_98569016	0.644064	HOX{A6,A7,B6,B7}.p2	AK139060|Dach1|13134|dachshund 1 (Drosophila)
mm9_v1_chr2_-_12933305_12933373	0.642418	HOX{A6,A7,B6,B7}.p2	AB044560|C1ql3|227580|C1q-like 3
mm9_v1_chr2_-_23904343_23904369	0.642252	HOX{A6,A7,B6,B7}.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr18_-_77870871_77870990	0.641273	HOX{A6,A7,B6,B7}.p2	AK009215|2310007O11Rik|74177|RIKEN cDNA 2310007O11 gene
mm9_v1_chr3_-_72861724_72861729	0.64111	HOX{A6,A7,B6,B7}.p2	AK158856|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr5_-_121459496_121459582	0.63986	HOX{A6,A7,B6,B7}.p2	BC042585|Rph3a|19894|rabphilin 3A	NM_011286|Rph3a|19894|rabphilin 3A
mm9_v1_chr6_-_112896894_112896953	0.639764	HOX{A6,A7,B6,B7}.p2	AK122276|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr2_-_57905140_57905276	0.635985	HOX{A6,A7,B6,B7}.p2	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr18_+_37885359_37885546	0.635472	HOX{A6,A7,B6,B7}.p2	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr9_-_64585562_64585585	0.633968	HOX{A6,A7,B6,B7}.p2	AK014268|Rab11a|53869|RAB11a, member RAS oncogene family	AK147122|Rab11a|53869|RAB11a, member RAS oncogene family	NM_017382|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr6_-_137519312_137519326	0.633168	HOX{A6,A7,B6,B7}.p2	AK149683|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr3_-_108236057_108236062	0.632323	HOX{A6,A7,B6,B7}.p2	AK181805|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK190309|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK217331|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK219731|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr17_-_85461840_85461859	0.63204	HOX{A6,A7,B6,B7}.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr13_-_12199109_12199211	0.631862	HOX{A6,A7,B6,B7}.p2	BC043140|Ryr2|20191|ryanodine receptor 2, cardiac	BC059061|Ryr2|20191|ryanodine receptor 2, cardiac	NM_023868|Ryr2|20191|ryanodine receptor 2, cardiac
mm9_v1_chrX_+_20276404_20276539	0.631311	HOX{A6,A7,B6,B7}.p2	AK177013|Cdk16|18555|cyclin-dependent kinase 16	AK212751|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr12_-_86691817_86691869	0.631272	HOX{A6,A7,B6,B7}.p2	AK191153|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK198152|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK201939|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK206502|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK207697|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK216393|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC006774|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr16_+_6349108_6349144	0.628624	HOX{A6,A7,B6,B7}.p2	AK134833|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr5_-_144267802_144267897	0.62854	HOX{A6,A7,B6,B7}.p2	AK211591|Rac1|19353|RAS-related C3 botulinum substrate 1	AK186906|Rac1|19353|RAS-related C3 botulinum substrate 1	AK190884|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr14_+_120674933_120674934	0.625821	HOX{A6,A7,B6,B7}.p2	AK159213|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr2_+_124436031_124436031	0.625285	HOX{A6,A7,B6,B7}.p2	AB091532|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_172537|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199238|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199239|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199240|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199241|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr17_-_27717411_27717581	0.623988	HOX{A6,A7,B6,B7}.p2	AK195385|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	AK205576|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	AK003601|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	AK211644|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm9_v1_chr9_-_78326946_78326968	0.623169	HOX{A6,A7,B6,B7}.p2	BC099609|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr19_+_8692485_8692668	0.623097	HOX{A6,A7,B6,B7}.p2	NM_008766|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	BC021647|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	U52842|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	AK035971|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6
mm9_v1_chr19_+_9026020_9026327	0.622945	HOX{A6,A7,B6,B7}.p2	AK199642|Mta2|23942|metastasis-associated gene family, member 2	AK219174|Mta2|23942|metastasis-associated gene family, member 2	AK195366|Mta2|23942|metastasis-associated gene family, member 2	AK209683|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr5_-_24348170_24348237	0.622213	HOX{A6,A7,B6,B7}.p2	AY197373|Rheb|19744|Ras homolog enriched in brain	NM_053075|Rheb|19744|Ras homolog enriched in brain	BC012273|Rheb|19744|Ras homolog enriched in brain	AK151213|Rheb|19744|Ras homolog enriched in brain	AB039919|Rheb|19744|Ras homolog enriched in brain
mm9_v1_chr6_+_112223751_112223811	0.622056	HOX{A6,A7,B6,B7}.p2	AK075847|Lmcd1|30937|LIM and cysteine-rich domains 1	NM_144799|Lmcd1|30937|LIM and cysteine-rich domains 1	AK159946|Lmcd1|30937|LIM and cysteine-rich domains 1	BC019124|Lmcd1|30937|LIM and cysteine-rich domains 1
mm9_v1_chr1_-_137064124_137064257	0.620785	HOX{A6,A7,B6,B7}.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr9_-_103595136_103595138	0.620782	HOX{A6,A7,B6,B7}.p2	AK132350|Tmem108|81907|transmembrane protein 108
mm9_v1_chr13_+_22127689_22127755	0.620751	HOX{A6,A7,B6,B7}.p2	BC147143|Hist1h2bk|319184|histone cluster 1, H2bk	BC147144|Hist1h2bk|319184|histone cluster 1, H2bk	NM_175665|Hist1h2bk|319184|histone cluster 1, H2bk
mm9_v1_chr1_+_148344816_148344867	0.620242	HOX{A6,A7,B6,B7}.p2	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr16_-_85056592_85056771	0.620112	HOX{A6,A7,B6,B7}.p2	M24397|App|11820|amyloid beta (A4) precursor protein	AK161854|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_+_60155090_60155124	0.619973	HOX{A6,A7,B6,B7}.p2	AK044738|Carf|241066|calcium response factor	AK045594|Carf|241066|calcium response factor	AF454947|Carf|241066|calcium response factor	NM_139150|Carf|241066|calcium response factor
mm9_v1_chr2_+_131763454_131763725	0.619026	HOX{A6,A7,B6,B7}.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr19_-_40588219_40588234	0.61868	HOX{A6,A7,B6,B7}.p2	AK087553|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_178362|Sorbs1|20411|sorbin and SH3 domain containing 1	BC012703|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr14_+_59820284_59820346	0.618436	HOX{A6,A7,B6,B7}.p2	AK017287|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr3_+_89586320_89586446	0.617888	HOX{A6,A7,B6,B7}.p2	AK211403|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr3_-_129035406_129035666	0.617458	HOX{A6,A7,B6,B7}.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr2_+_38441497_38441644	0.617428	HOX{A6,A7,B6,B7}.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr5_-_134713923_134714158	0.615516	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_85689250_85689250	0.615342	HOX{A6,A7,B6,B7}.p2	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr1_+_57028300_57028346	0.615111	HOX{A6,A7,B6,B7}.p2	AK046727|9130024F11Rik|329160|RIKEN cDNA 9130024F11 gene
mm9_v1_chrX_-_100381973_100382006	0.612588	HOX{A6,A7,B6,B7}.p2	X92352|Nap1l2|17954|nucleosome assembly protein 1-like 2	NM_008671|Nap1l2|17954|nucleosome assembly protein 1-like 2
mm9_v1_chr3_-_88897207_88897284	0.611775	HOX{A6,A7,B6,B7}.p2	AK039664|Rusc1|72296|RUN and SH3 domain containing 1	BC056360|Rusc1|72296|RUN and SH3 domain containing 1	AK042689|Rusc1|72296|RUN and SH3 domain containing 1	NM_001083807|Rusc1|72296|RUN and SH3 domain containing 1	NM_028188|Rusc1|72296|RUN and SH3 domain containing 1
mm9_v1_chr7_+_94735020_94735047	0.610912	HOX{A6,A7,B6,B7}.p2	AK021113|C030032F19Rik|77389|RIKEN cDNA C030032F19 gene
mm9_v1_chr11_+_98209978_98210141	0.609985	HOX{A6,A7,B6,B7}.p2	BC026568|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_144828|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC011122|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B
mm9_v1_chr18_+_33098694_33098843	0.609588	HOX{A6,A7,B6,B7}.p2	NM_009793|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	AK030219|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	BC070420|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr18_+_38001276_38001417	0.609389	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_37966157_37966201	0.609121	HOX{A6,A7,B6,B7}.p2	AY013811|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr18_-_67712374_67712430	0.606018	HOX{A6,A7,B6,B7}.p2	BC058669|Spire1|68166|spire homolog 1 (Drosophila)	NM_194355|Spire1|68166|spire homolog 1 (Drosophila)	BC094375|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr2_+_177876858_177876930	0.604475	HOX{A6,A7,B6,B7}.p2	BC059869|Phactr3|74189|phosphatase and actin regulator 3	AK032242|Phactr3|74189|phosphatase and actin regulator 3	AY501387|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr4_-_108311676_108311740	0.603549	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_84574217_84574360	0.603184	HOX{A6,A7,B6,B7}.p2	AB098743|Ypel4|241525|yippee-like 4 (Drosophila)	NM_001005342|Ypel4|241525|yippee-like 4 (Drosophila)
mm9_v1_chr2_+_59322709_59322728	0.602834	HOX{A6,A7,B6,B7}.p2	NM_029723|Dapl1|76747|death associated protein-like 1	AK009567|Dapl1|76747|death associated protein-like 1	BC116916|Dapl1|76747|death associated protein-like 1	BC116920|Dapl1|76747|death associated protein-like 1	BC063096|Dapl1|76747|death associated protein-like 1	BC052745|Dapl1|76747|death associated protein-like 1
mm9_v1_chr19_+_5493612_5493771	0.602095	HOX{A6,A7,B6,B7}.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr18_+_37105758_37105860	0.601758	HOX{A6,A7,B6,B7}.p2	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr19_-_4287408_4287579	0.601689	HOX{A6,A7,B6,B7}.p2	AK153543|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr11_-_116713532_116713613	0.601321	HOX{A6,A7,B6,B7}.p2	AF250135|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr10_-_86164623_86164759	0.601104	HOX{A6,A7,B6,B7}.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr5_-_104419233_104419272	0.599887	HOX{A6,A7,B6,B7}.p2	BC038665|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr19_+_45122281_45122364	0.59899	HOX{A6,A7,B6,B7}.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr7_+_104991443_104991474	0.598614	HOX{A6,A7,B6,B7}.p2	BC055740|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC060157|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	NM_011035|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC079838|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr1_+_62750471_62750778	0.597947	HOX{A6,A7,B6,B7}.p2	AK153553|Nrp2|18187|neuropilin 2	BC057028|Nrp2|18187|neuropilin 2	BC098200|Nrp2|18187|neuropilin 2	AF483506|Nrp2|18187|neuropilin 2	AF483507|Nrp2|18187|neuropilin 2
mm9_v1_chr3_-_89049756_89049818	0.597558	HOX{A6,A7,B6,B7}.p2	BC082299|Trim46|360213|tripartite motif-containing 46	NM_183037|Trim46|360213|tripartite motif-containing 46
mm9_v1_chr6_-_52154325_52154433	0.595906	HOX{A6,A7,B6,B7}.p2	AK144356|Hoxa5|15402|homeobox A5	AB221550|Hoxa5|15402|homeobox A5	BC011063|Hoxa5|15402|homeobox A5
mm9_v1_chr17_-_46683249_46683336	0.593035	HOX{A6,A7,B6,B7}.p2	AK147675|Cul9|78309|cullin 9	NM_001081335|Cul9|78309|cullin 9
mm9_v1_chr13_+_42804911_42805054	0.592501	HOX{A6,A7,B6,B7}.p2	BC048407|Phactr1|218194|phosphatase and actin regulator 1	BC061691|Phactr1|218194|phosphatase and actin regulator 1	NM_001005740|Phactr1|218194|phosphatase and actin regulator 1	AK048208|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr8_+_46593141_46593271	0.590858	HOX{A6,A7,B6,B7}.p2	AK171632|Sorbs2|234214|sorbin and SH3 domain containing 2	NM_172752|Sorbs2|234214|sorbin and SH3 domain containing 2	AK139388|Sorbs2|234214|sorbin and SH3 domain containing 2	BC151038|Sorbs2|234214|sorbin and SH3 domain containing 2	BC172140|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr17_+_70871393_70871416	0.58765	HOX{A6,A7,B6,B7}.p2	AK036307|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr2_+_180332926_180333016	0.587189	HOX{A6,A7,B6,B7}.p2	NM_009936|Col9a3|12841|collagen, type IX, alpha 3	AK030350|Col9a3|12841|collagen, type IX, alpha 3	AF349718|Col9a3|12841|collagen, type IX, alpha 3
mm9_v1_chr4_-_132383213_132383408	0.587142	HOX{A6,A7,B6,B7}.p2	AK198369|Ppp1r8|100336|protein phosphatase 1, regulatory (inhibitor) subunit 8
mm9_v1_chr18_+_35020859_35020865	0.586894	HOX{A6,A7,B6,B7}.p2	M38174|Egr1|13653|early growth response 1	AK037837|Egr1|13653|early growth response 1	AK040925|Egr1|13653|early growth response 1	AK146322|Egr1|13653|early growth response 1	NM_007913|Egr1|13653|early growth response 1	AK145198|Egr1|13653|early growth response 1
mm9_v1_chr1_-_183111470_183111575	0.586499	HOX{A6,A7,B6,B7}.p2	AK211036|Wdr26|226757|WD repeat domain 26
mm9_v1_chr11_+_96164905_96165020	0.586493	HOX{A6,A7,B6,B7}.p2	BC103595|Hoxb5|15413|homeobox B5	BC103596|Hoxb5|15413|homeobox B5	BC103604|Hoxb5|15413|homeobox B5	BC103607|Hoxb5|15413|homeobox B5	AK133512|Hoxb5|15413|homeobox B5	AK012146|Hoxb5|15413|homeobox B5
mm9_v1_chr2_+_16277924_16277950	0.586432	HOX{A6,A7,B6,B7}.p2	AK035165|Plxdc2|67448|plexin domain containing 2	AK004640|Plxdc2|67448|plexin domain containing 2	NM_026162|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr3_-_116671869_116671896	0.585781	HOX{A6,A7,B6,B7}.p2	NM_023245|Palmd|114301|palmdelphin
mm9_v1_chr5_+_34185760_34185844	0.585066	HOX{A6,A7,B6,B7}.p2	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr18_-_81183260_81183316	0.584256	HOX{A6,A7,B6,B7}.p2	BC072631|Sall3|20689|sal-like 3 (Drosophila)	NM_178280|Sall3|20689|sal-like 3 (Drosophila)
mm9_v1_chr14_+_122874598_122874609	0.583116	HOX{A6,A7,B6,B7}.p2	AK051032|Zic2|22772|zinc finger protein of the cerebellum 2	NM_009574|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr18_+_61085283_61085301	0.582032	HOX{A6,A7,B6,B7}.p2	AK083245|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK163179|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	NM_177407|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK122410|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X14836|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr2_-_79294977_79295122	0.581694	HOX{A6,A7,B6,B7}.p2	U28068|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr11_-_55208276_55208319	0.581499	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_89892027_89892040	0.580966	HOX{A6,A7,B6,B7}.p2	AK003574|Tmem100|67888|transmembrane protein 100	AK033406|Tmem100|67888|transmembrane protein 100
mm9_v1_chr15_+_78860623_78860757	0.578493	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_130829763_130829919	0.578489	HOX{A6,A7,B6,B7}.p2	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr16_+_49906392_49906404	0.578098	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_126827366_126827366	0.576855	HOX{A6,A7,B6,B7}.p2	NM_001168292|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr13_+_75844906_75844941	0.575895	HOX{A6,A7,B6,B7}.p2	NM_138953|Ell2|192657|elongation factor RNA polymerase II 2
mm9_v1_chr2_+_153035426_153035671	0.575674	HOX{A6,A7,B6,B7}.p2	AK194607|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK208683|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr11_-_118163704_118163735	0.575284	HOX{A6,A7,B6,B7}.p2	AK217225|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr12_+_79849894_79849915	0.572115	HOX{A6,A7,B6,B7}.p2	AK133187|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC067404|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr2_+_118489312_118489451	0.572023	HOX{A6,A7,B6,B7}.p2	BC079572|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	NM_001033254|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	BC150754|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr6_-_142650737_142650793	0.570716	HOX{A6,A7,B6,B7}.p2	D86037|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	D86038|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	AF003531|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	U97066|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_001044720|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_011511|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021041|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021042|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm9_v1_chr7_+_11032137_11032137	0.570575	HOX{A6,A7,B6,B7}.p2	BC138174|Vmn1r67|171263|vomeronasal 1 receptor 67	BC145742|Vmn1r67|171263|vomeronasal 1 receptor 67	NM_134229|Vmn1r67|171263|vomeronasal 1 receptor 67
mm9_v1_chr17_+_46390828_46391138	0.570163	HOX{A6,A7,B6,B7}.p2	AK134769|Gm88|224813|predicted gene 88	NM_001111142|Gm88|224813|predicted gene 88	BC147714|Gm88|224813|predicted gene 88	BC172136|Gm88|224813|predicted gene 88
mm9_v1_chr14_+_19103655_19103798	0.569316	HOX{A6,A7,B6,B7}.p2	NM_023526|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK028539|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK148040|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK010285|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	BC061092|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK167340|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AF225707|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1
mm9_v1_chr17_+_24625530_24625580	0.569058	HOX{A6,A7,B6,B7}.p2	AK014376|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr15_-_57723866_57723934	0.568882	HOX{A6,A7,B6,B7}.p2	AK075631|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr6_+_71657791_71657963	0.568838	HOX{A6,A7,B6,B7}.p2	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr9_+_45178485_45178507	0.568539	HOX{A6,A7,B6,B7}.p2	BC051127|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK003888|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr17_-_45705198_45705339	0.56778	HOX{A6,A7,B6,B7}.p2	AK192311|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr12_+_77182878_77182935	0.567219	HOX{A6,A7,B6,B7}.p2	FJ848978|Syne2|319565|synaptic nuclear envelope 2
mm9_v1_chr14_+_69647294_69647485	0.566462	HOX{A6,A7,B6,B7}.p2	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr9_-_96531911_96531965	0.565694	HOX{A6,A7,B6,B7}.p2	AB056433|Rasa2|114713|RAS p21 protein activator 2	AK034434|Rasa2|114713|RAS p21 protein activator 2	NM_053268|Rasa2|114713|RAS p21 protein activator 2	AK154499|Rasa2|114713|RAS p21 protein activator 2	AK166654|Rasa2|114713|RAS p21 protein activator 2
mm9_v1_chr2_+_97307533_97307589	0.564758	HOX{A6,A7,B6,B7}.p2	AK158844|Lrrc4c|241568|leucine rich repeat containing 4C
mm9_v1_chr5_-_24348375_24348447	0.564358	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_34631124_34631274	0.563187	HOX{A6,A7,B6,B7}.p2	M30779|Hspa5|14828|heat shock protein 5	M19351|Hspa5|14828|heat shock protein 5	AK198632|Hspa5|14828|heat shock protein 5	AK215158|Hspa5|14828|heat shock protein 5
mm9_v1_chr9_-_121404799_121404856	0.562824	HOX{A6,A7,B6,B7}.p2	NM_031161|Cck|12424|cholecystokinin
mm9_v1_chr11_+_31901708_31901737	0.562605	HOX{A6,A7,B6,B7}.p2	AK011563|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr3_+_19857375_19857397	0.561909	HOX{A6,A7,B6,B7}.p2	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chr18_+_37164856_37165092	0.561454	HOX{A6,A7,B6,B7}.p2	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr2_+_119698245_119698286	0.560954	HOX{A6,A7,B6,B7}.p2	AK133775|Mga|29808|MAX gene associated
mm9_v1_chr9_+_92502908_92503003	0.560214	HOX{A6,A7,B6,B7}.p2	AK218100|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr2_+_55289530_55289587	0.560094	HOX{A6,A7,B6,B7}.p2	AK046778|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	D45022|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	NM_008426|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103671|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103673|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103674|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103672|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3
mm9_v1_chr2_-_150730457_150730470	0.560044	HOX{A6,A7,B6,B7}.p2	AK160126|Abhd12|76192|abhydrolase domain containing 12	NM_024465|Abhd12|76192|abhydrolase domain containing 12
mm9_v1_chr15_-_98783909_98783984	0.558841	HOX{A6,A7,B6,B7}.p2	M13445|Tuba1a|22142|tubulin, alpha 1A	NM_011653|Tuba1a|22142|tubulin, alpha 1A	AK077529|Tuba1a|22142|tubulin, alpha 1A	BC056169|Tuba1a|22142|tubulin, alpha 1A	BC083344|Tuba1a|22142|tubulin, alpha 1A	BC083343|Tuba1a|22142|tubulin, alpha 1A	BC085256|Tuba1a|22142|tubulin, alpha 1A	BC083345|Tuba1a|22142|tubulin, alpha 1A	AK145404|Tuba1a|22142|tubulin, alpha 1A	AK146983|Tuba1a|22142|tubulin, alpha 1A	AK167687|Tuba1a|22142|tubulin, alpha 1A	AK168762|Tuba1a|22142|tubulin, alpha 1A	AK169610|Tuba1a|22142|tubulin, alpha 1A	AK164335|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr9_-_115152895_115153139	0.558784	HOX{A6,A7,B6,B7}.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr14_-_73764361_73764430	0.555777	HOX{A6,A7,B6,B7}.p2	AK008861|Itm2b|16432|integral membrane protein 2B	AK210559|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr1_-_39608846_39608882	0.554561	HOX{A6,A7,B6,B7}.p2	AK040602|Rnf149|67702|ring finger protein 149
mm9_v1_chr10_+_42547705_42547741	0.554523	HOX{A6,A7,B6,B7}.p2	AK180295|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr7_-_13619936_13620150	0.553428	HOX{A6,A7,B6,B7}.p2	BC012230|Chmp2a|68953|chromatin modifying protein 2A	AK005267|Chmp2a|68953|chromatin modifying protein 2A	NM_026885|Chmp2a|68953|chromatin modifying protein 2A
mm9_v1_chr2_-_29108440_29108468	0.55327	HOX{A6,A7,B6,B7}.p2	AK154396|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene
mm9_v1_chr3_+_95733186_95733221	0.550164	HOX{A6,A7,B6,B7}.p2	AK088401|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK012759|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK049647|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK159446|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK147888|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr13_-_38694739_38694840	0.548605	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_52072302_52072340	0.543442	HOX{A6,A7,B6,B7}.p2	AK137629|Foxo1|56458|forkhead box O1	AF114258|Foxo1|56458|forkhead box O1
mm9_v1_chr8_-_37631772_37631789	0.543375	HOX{A6,A7,B6,B7}.p2	BC048730|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr12_+_77634546_77634606	0.543368	HOX{A6,A7,B6,B7}.p2	AK080928|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	NM_153804|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	BC096443|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	AK162025|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm9_v1_chr6_+_124959207_124959358	0.54226	HOX{A6,A7,B6,B7}.p2	AK156026|Zfp384|269800|zinc finger protein 384	AK172476|Zfp384|269800|zinc finger protein 384
mm9_v1_chr3_-_72860864_72860987	0.541889	HOX{A6,A7,B6,B7}.p2	BC066059|Slitrk3|386750|SLIT and NTRK-like family, member 3	NM_198864|Slitrk3|386750|SLIT and NTRK-like family, member 3	AK139378|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr16_-_85901306_85901312	0.541326	HOX{A6,A7,B6,B7}.p2	AK020662|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr14_-_94289847_94289904	0.540424	HOX{A6,A7,B6,B7}.p2	BC060736|Pcdh9|211712|protocadherin 9	AK147451|Pcdh9|211712|protocadherin 9
mm9_v1_chr2_+_80159376_80159440	0.539434	HOX{A6,A7,B6,B7}.p2	AK179556|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr8_+_116729508_116729539	0.538482	HOX{A6,A7,B6,B7}.p2	BC056927|Vat1l|270097|vesicle amine transport protein 1 homolog-like (T. californica)	AK122527|Vat1l|270097|vesicle amine transport protein 1 homolog-like (T. californica)	NM_173016|Vat1l|270097|vesicle amine transport protein 1 homolog-like (T. californica)
mm9_v1_chr16_+_94791713_94791812	0.537708	HOX{A6,A7,B6,B7}.p2	NM_007890|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr4_-_42993205_42993326	0.537573	HOX{A6,A7,B6,B7}.p2	AK217741|Vcp|269523|valosin containing protein	AK209181|Vcp|269523|valosin containing protein
mm9_v1_chr8_+_124254462_124254503	0.537439	HOX{A6,A7,B6,B7}.p2	AB024449|Jph3|57340|junctophilin 3	NM_020605|Jph3|57340|junctophilin 3	AK046136|Jph3|57340|junctophilin 3	AK082880|Jph3|57340|junctophilin 3	AK045706|Jph3|57340|junctophilin 3	BC103682|Jph3|57340|junctophilin 3	BC104736|Jph3|57340|junctophilin 3	BC105307|Jph3|57340|junctophilin 3
mm9_v1_chr11_+_75565381_75565439	0.536982	HOX{A6,A7,B6,B7}.p2	AX775993|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK192964|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK202856|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr2_-_66248146_66248185	0.535903	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_108998727_108998913	0.535102	HOX{A6,A7,B6,B7}.p2	AK204470|Gak|231580|cyclin G associated kinase	AK205859|Gak|231580|cyclin G associated kinase
mm9_v1_chr14_+_122874625_122874656	0.535102	HOX{A6,A7,B6,B7}.p2	D70848|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr2_+_163051189_163051200	0.535061	HOX{A6,A7,B6,B7}.p2	NM_001098799|Tox2|269389|TOX high mobility group box family member 2
mm9_v1_chr2_-_151458281_151458296	0.5349	HOX{A6,A7,B6,B7}.p2	BC072567|Snph|241727|syntaphilin
mm9_v1_chr4_-_132066370_132066424	0.534471	HOX{A6,A7,B6,B7}.p2	BC005672|Sesn2|230784|sestrin 2	NM_144907|Sesn2|230784|sestrin 2	AK170228|Sesn2|230784|sestrin 2	AK170547|Sesn2|230784|sestrin 2	AK143788|Sesn2|230784|sestrin 2
mm9_v1_chr14_-_73762840_73762848	0.534208	HOX{A6,A7,B6,B7}.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr3_+_75878452_75878519	0.533089	HOX{A6,A7,B6,B7}.p2	AK140611|Fstl5|213262|follistatin-like 5	AK033652|Fstl5|213262|follistatin-like 5	AK081152|Fstl5|213262|follistatin-like 5	AF374460|Fstl5|213262|follistatin-like 5	BC075640|Fstl5|213262|follistatin-like 5	NM_178673|Fstl5|213262|follistatin-like 5
mm9_v1_chr14_+_120675041_120675104	0.531477	HOX{A6,A7,B6,B7}.p2	AK178090|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr12_+_109648864_109648871	0.52955	HOX{A6,A7,B6,B7}.p2	BC059839|Eml1|68519|echinoderm microtubule associated protein like 1	NM_001043336|Eml1|68519|echinoderm microtubule associated protein like 1	BC125289|Eml1|68519|echinoderm microtubule associated protein like 1	BC144757|Eml1|68519|echinoderm microtubule associated protein like 1
mm9_v1_chr2_+_158235611_158235613	0.528881	HOX{A6,A7,B6,B7}.p2	AK083733|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)
mm9_v1_chrX_+_50373295_50373321	0.52806	HOX{A6,A7,B6,B7}.p2	AY423851|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase
mm9_v1_chr9_+_95459990_95460369	0.527344	HOX{A6,A7,B6,B7}.p2	AY424298|Paqr9|75552|progestin and adipoQ receptor family member IX	NM_198414|Paqr9|75552|progestin and adipoQ receptor family member IX	AK133021|Paqr9|75552|progestin and adipoQ receptor family member IX
mm9_v1_chr3_+_102847115_102847128	0.527207	HOX{A6,A7,B6,B7}.p2	BC029058|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr3_-_79541715_79541801	0.527094	HOX{A6,A7,B6,B7}.p2	AY509975|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	NM_212452|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	AK137655|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1
mm9_v1_chr3_-_126865259_126865312	0.526864	HOX{A6,A7,B6,B7}.p2	AK083111|Ank2|109676|ankyrin 2, brain
mm9_v1_chr19_-_46119403_46119446	0.523268	HOX{A6,A7,B6,B7}.p2	AF030333|Ldb1|16825|LIM domain binding 1
mm9_v1_chr8_-_88063071_88063191	0.522106	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_29457924_29457972	0.521864	HOX{A6,A7,B6,B7}.p2	BC119794|Kcp|333088|kielin/chordin-like protein	NM_001029985|Kcp|333088|kielin/chordin-like protein	AY884211|Kcp|333088|kielin/chordin-like protein	AK154369|Kcp|333088|kielin/chordin-like protein
mm9_v1_chr1_-_72920776_72921027	0.519716	HOX{A6,A7,B6,B7}.p2	X81583|Igfbp5|16011|insulin-like growth factor binding protein 5	BC054812|Igfbp5|16011|insulin-like growth factor binding protein 5	BC026805|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr11_-_51420064_51420093	0.518437	HOX{A6,A7,B6,B7}.p2	DQ397821|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	DQ397822|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr2_+_80478960_80478972	0.518436	HOX{A6,A7,B6,B7}.p2	NM_027091|Nup35|69482|nucleoporin 35	AK089997|Nup35|69482|nucleoporin 35
mm9_v1_chr5_-_144266956_144266980	0.517437	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_102110161_102110288	0.516868	HOX{A6,A7,B6,B7}.p2	NM_153544|BC030867|217216|cDNA sequence BC030867	AK029811|BC030867|217216|cDNA sequence BC030867	BC030867|BC030867|217216|cDNA sequence BC030867	BC108338|BC030867|217216|cDNA sequence BC030867	BC085317|BC030867|217216|cDNA sequence BC030867
mm9_v1_chr9_+_72286335_72286422	0.514489	HOX{A6,A7,B6,B7}.p2	NM_008613|Mns1|17427|meiosis-specific nuclear structural protein 1	AK132772|Mns1|17427|meiosis-specific nuclear structural protein 1	AK013048|Mns1|17427|meiosis-specific nuclear structural protein 1	BC046624|Mns1|17427|meiosis-specific nuclear structural protein 1
mm9_v1_chr14_+_63761085_63761315	0.514367	HOX{A6,A7,B6,B7}.p2	X54966|Ctsb|13030|cathepsin B
mm9_v1_chr2_-_92224258_92224292	0.51379	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_-_65515555_65515693	0.513444	HOX{A6,A7,B6,B7}.p2	BC002212|Hmbox1|219150|homeobox containing 1
mm9_v1_chr8_+_96334879_96334940	0.51338	HOX{A6,A7,B6,B7}.p2	BC051989|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr4_+_137797490_137797591	0.512927	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_90252228_90252237	0.510651	HOX{A6,A7,B6,B7}.p2	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr2_-_5635547_5635807	0.508124	HOX{A6,A7,B6,B7}.p2	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr10_-_60892540_60892651	0.507788	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_3224767_3224812	0.506789	HOX{A6,A7,B6,B7}.p2	AK190911|Sepp1|20363|selenoprotein P, plasma, 1	AK192055|Sepp1|20363|selenoprotein P, plasma, 1	AK192611|Sepp1|20363|selenoprotein P, plasma, 1	AK193239|Sepp1|20363|selenoprotein P, plasma, 1	AK193304|Sepp1|20363|selenoprotein P, plasma, 1	AK193589|Sepp1|20363|selenoprotein P, plasma, 1	AK196001|Sepp1|20363|selenoprotein P, plasma, 1	AK199796|Sepp1|20363|selenoprotein P, plasma, 1	AK200678|Sepp1|20363|selenoprotein P, plasma, 1	AK201439|Sepp1|20363|selenoprotein P, plasma, 1	AK201752|Sepp1|20363|selenoprotein P, plasma, 1	AK202422|Sepp1|20363|selenoprotein P, plasma, 1	AK203751|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr7_+_94732677_94732677	0.506748	HOX{A6,A7,B6,B7}.p2	NM_001081414|Grm5|108071|glutamate receptor, metabotropic 5	NM_001143834|Grm5|108071|glutamate receptor, metabotropic 5
mm9_v1_chr5_-_8422533_8422723	0.506175	HOX{A6,A7,B6,B7}.p2	BC138709|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC138710|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC145392|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AJ003132|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC069983|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK132403|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK014480|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC050827|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_001190717|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_013726|Dbf4|27214|DBF4 homolog (S. cerevisiae)
mm9_v1_chr13_+_24904944_24904959	0.505004	HOX{A6,A7,B6,B7}.p2	AK088171|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr18_+_37678006_37678134	0.504725	HOX{A6,A7,B6,B7}.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chrX_-_102052460_102052605	0.503618	HOX{A6,A7,B6,B7}.p2	BC132640|Magee2|272790|melanoma antigen, family E, 2	BC138210|Magee2|272790|melanoma antigen, family E, 2	BC094361|Magee2|272790|melanoma antigen, family E, 2	AK134670|Magee2|272790|melanoma antigen, family E, 2	AK036343|Magee2|272790|melanoma antigen, family E, 2	NM_053206|Magee2|272790|melanoma antigen, family E, 2
mm9_v1_chr5_-_77544147_77544201	0.503333	HOX{A6,A7,B6,B7}.p2	AF492703|Hopx|74318|HOP homeobox	NM_175606|Hopx|74318|HOP homeobox	AF534182|Hopx|74318|HOP homeobox
mm9_v1_chr4_+_102432943_102433069	0.503138	HOX{A6,A7,B6,B7}.p2	AK032439|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	AK148302|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	BC017596|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_144906|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	AK014022|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr6_-_24905939_24906124	0.49996	HOX{A6,A7,B6,B7}.p2	BC147241|Tmem229a|319832|transmembrane protein 229A	BC147242|Tmem229a|319832|transmembrane protein 229A	AK140056|Tmem229a|319832|transmembrane protein 229A	AK087465|Tmem229a|319832|transmembrane protein 229A	NM_177013|Tmem229a|319832|transmembrane protein 229A
mm9_v1_chr12_-_8506790_8506819	0.498739	HOX{A6,A7,B6,B7}.p2	BC018275|Rhob|11852|ras homolog gene family, member B	NM_007483|Rhob|11852|ras homolog gene family, member B	BC110992|Rhob|11852|ras homolog gene family, member B	AK167917|Rhob|11852|ras homolog gene family, member B	AK086873|Rhob|11852|ras homolog gene family, member B	AK164518|Rhob|11852|ras homolog gene family, member B
mm9_v1_chr4_-_136454674_136454768	0.498049	HOX{A6,A7,B6,B7}.p2	X58861|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159343|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK002655|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK136737|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK150771|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159210|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	BC002086|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	NM_007572|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide
mm9_v1_chrX_-_34731084_34731232	0.496726	HOX{A6,A7,B6,B7}.p2	CT010398|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	AK007840|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	BC024364|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	NM_019443|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1
mm9_v1_chr18_-_38094995_38095137	0.49632	HOX{A6,A7,B6,B7}.p2	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr13_+_95558851_95558906	0.495741	HOX{A6,A7,B6,B7}.p2	AK140276|Tbca|21371|tubulin cofactor A	BC087931|Tbca|21371|tubulin cofactor A	AK010859|Tbca|21371|tubulin cofactor A	BC055749|Tbca|21371|tubulin cofactor A	AK151218|Tbca|21371|tubulin cofactor A	AK168296|Tbca|21371|tubulin cofactor A	NM_009321|Tbca|21371|tubulin cofactor A	U05333|Tbca|21371|tubulin cofactor A	BC051475|Tbca|21371|tubulin cofactor A	BC034267|Tbca|21371|tubulin cofactor A
mm9_v1_chr19_-_40588235_40588251	0.495691	HOX{A6,A7,B6,B7}.p2	U58883|Sorbs1|20411|sorbin and SH3 domain containing 1	AK035212|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr10_-_83989221_83989289	0.495375	HOX{A6,A7,B6,B7}.p2	AK205593|Ckap4|216197|cytoskeleton-associated protein 4	AK212843|Ckap4|216197|cytoskeleton-associated protein 4	AK217343|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr6_+_60894310_60894310	0.493412	HOX{A6,A7,B6,B7}.p2	NM_001163507|Mmrn1|70945|multimerin 1	NM_027613|Mmrn1|70945|multimerin 1
mm9_v1_chr2_+_123915670_123915704	0.493324	HOX{A6,A7,B6,B7}.p2	AK122515|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr11_+_56825192_56825257	0.493278	HOX{A6,A7,B6,B7}.p2	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr8_-_74150754_74150876	0.492416	HOX{A6,A7,B6,B7}.p2	AK141620|Unc13a|382018|unc-13 homolog A (C. elegans)	AK048697|Unc13a|382018|unc-13 homolog A (C. elegans)	AK039579|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr16_-_46010510_46010548	0.491239	HOX{A6,A7,B6,B7}.p2	NM_001134480|Plcxd2|433022|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm9_v1_chr17_+_71168939_71168940	0.490033	HOX{A6,A7,B6,B7}.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr7_+_5031809_5032021	0.489328	HOX{A6,A7,B6,B7}.p2	AK155033|Epn1|13854|epsin 1	BC067206|Epn1|13854|epsin 1	BC099682|Epn1|13854|epsin 1	NM_010147|Epn1|13854|epsin 1
mm9_v1_chr9_-_32348863_32349036	0.488519	HOX{A6,A7,B6,B7}.p2	BC138791|Fli1|14247|Friend leukemia integration 1	BC138792|Fli1|14247|Friend leukemia integration 1	AK042111|Fli1|14247|Friend leukemia integration 1	AK154714|Fli1|14247|Friend leukemia integration 1	NM_008026|Fli1|14247|Friend leukemia integration 1	AK036655|Fli1|14247|Friend leukemia integration 1	X59421|Fli1|14247|Friend leukemia integration 1
mm9_v1_chr19_-_40588193_40588218	0.48839	HOX{A6,A7,B6,B7}.p2	AK122487|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr6_-_58857000_58857134	0.487498	HOX{A6,A7,B6,B7}.p2	AB041556|Nap1l5|58243|nucleosome assembly protein 1-like 5	BC046332|Nap1l5|58243|nucleosome assembly protein 1-like 5	NM_021432|Nap1l5|58243|nucleosome assembly protein 1-like 5
mm9_v1_chr18_+_78016286_78016338	0.48688	HOX{A6,A7,B6,B7}.p2	AK157529|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK192613|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK196974|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK209959|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr7_+_31278675_31278685	0.486601	HOX{A6,A7,B6,B7}.p2	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr6_-_93628981_93629110	0.4854	HOX{A6,A7,B6,B7}.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr6_-_141804691_141804757	0.484782	HOX{A6,A7,B6,B7}.p2	AB031814|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4	NM_030687|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4
mm9_v1_chr6_-_115201790_115201797	0.484429	HOX{A6,A7,B6,B7}.p2	AF282730|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr7_-_104566013_104566047	0.482431	HOX{A6,A7,B6,B7}.p2	BC009165|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)	NM_009381|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)	AK050300|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)
mm9_v1_chr17_+_34176412_34176421	0.481621	HOX{A6,A7,B6,B7}.p2	D38412|Col11a2|12815|collagen, type XI, alpha 2
mm9_v1_chr18_+_20823750_20823857	0.481389	HOX{A6,A7,B6,B7}.p2	NM_013697|Ttr|22139|transthyretin	BC024702|Ttr|22139|transthyretin
mm9_v1_chr5_+_81449776_81449780	0.481156	HOX{A6,A7,B6,B7}.p2	AK155931|Lphn3|319387|latrophilin 3
mm9_v1_chr10_+_42550365_42550378	0.480238	HOX{A6,A7,B6,B7}.p2	AK017703|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr9_+_45178521_45178551	0.48008	HOX{A6,A7,B6,B7}.p2	BC042579|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK042808|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK018354|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AB032010|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr6_+_59158860_59158986	0.47989	HOX{A6,A7,B6,B7}.p2	NM_001081145|Tigd2|68140|tigger transposable element derived 2	AK019456|Tigd2|68140|tigger transposable element derived 2	AK005391|Tigd2|68140|tigger transposable element derived 2
mm9_v1_chr18_+_80409068_80409205	0.479829	HOX{A6,A7,B6,B7}.p2	AK183256|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr1_-_24594228_24594275	0.477343	HOX{A6,A7,B6,B7}.p2	BC118970|Col19a1|12823|collagen, type XIX, alpha 1	AB000636|Col19a1|12823|collagen, type XIX, alpha 1	AK149136|Col19a1|12823|collagen, type XIX, alpha 1	NM_007733|Col19a1|12823|collagen, type XIX, alpha 1
mm9_v1_chr18_+_37839910_37840111	0.47664	HOX{A6,A7,B6,B7}.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr14_-_56254424_56254541	0.476358	HOX{A6,A7,B6,B7}.p2	AK202276|Ipo4|75751|importin 4	AF123388|Ipo4|75751|importin 4	AK018399|Ipo4|75751|importin 4	AK147086|Ipo4|75751|importin 4	AK142138|Ipo4|75751|importin 4	BC075690|Ipo4|75751|importin 4	AK171031|Ipo4|75751|importin 4	NM_024267|Ipo4|75751|importin 4	AK030490|Ipo4|75751|importin 4
mm9_v1_chr4_-_118966829_118966902	0.476214	HOX{A6,A7,B6,B7}.p2	AK188049|Ybx1|22608|Y box protein 1	AF038994|Ybx1|22608|Y box protein 1
mm9_v1_chrX_-_147241307_147241451	0.475466	HOX{A6,A7,B6,B7}.p2	AK179193|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr6_-_49164952_49164952	0.475271	HOX{A6,A7,B6,B7}.p2	AK147140|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	NM_023670|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3
mm9_v1_chr13_+_44826700_44826834	0.474663	HOX{A6,A7,B6,B7}.p2	BC050129|Jarid2|16468|jumonji, AT rich interactive domain 2	AK044888|Jarid2|16468|jumonji, AT rich interactive domain 2	BC051010|Jarid2|16468|jumonji, AT rich interactive domain 2	BC026056|Jarid2|16468|jumonji, AT rich interactive domain 2	AK045214|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr11_+_61890494_61890602	0.473311	HOX{A6,A7,B6,B7}.p2	AK050982|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	AK220465|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	NM_001029936|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1
mm9_v1_chr9_+_122832164_122832215	0.473086	HOX{A6,A7,B6,B7}.p2	AK147198|Zfp105|22646|zinc finger protein 105	BC052165|Zfp105|22646|zinc finger protein 105	NM_009544|Zfp105|22646|zinc finger protein 105	AF045565|Zfp105|22646|zinc finger protein 105
mm9_v1_chr2_-_105234998_105235010	0.470407	HOX{A6,A7,B6,B7}.p2	AK214949|Rcn1|19672|reticulocalbin 1
mm9_v1_chr1_+_106665395_106665416	0.469933	HOX{A6,A7,B6,B7}.p2	AK034475|Cdh20|23836|cadherin 20	NM_011800|Cdh20|23836|cadherin 20	BC119606|Cdh20|23836|cadherin 20	BC119607|Cdh20|23836|cadherin 20
mm9_v1_chr13_+_42396844_42396991	0.468789	HOX{A6,A7,B6,B7}.p2	BC029547|Edn1|13614|endothelin 1	AK040778|Edn1|13614|endothelin 1	AK153437|Edn1|13614|endothelin 1	AK152647|Edn1|13614|endothelin 1
mm9_v1_chr17_+_44090222_44090252	0.468749	HOX{A6,A7,B6,B7}.p2	AK160865|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr2_+_155212676_155212898	0.468404	HOX{A6,A7,B6,B7}.p2	AK186401|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK195529|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK196103|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212608|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr18_+_74442753_74442835	0.468044	HOX{A6,A7,B6,B7}.p2	NM_028948|Ccdc11|74453|coiled-coil domain containing 11	AK016821|Ccdc11|74453|coiled-coil domain containing 11	AK162352|Ccdc11|74453|coiled-coil domain containing 11	BC099500|Ccdc11|74453|coiled-coil domain containing 11
mm9_v1_chr3_-_38349112_38349206	0.467993	HOX{A6,A7,B6,B7}.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr1_-_166371638_166371729	0.467459	HOX{A6,A7,B6,B7}.p2	AK162938|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr18_-_52689279_52689397	0.465487	HOX{A6,A7,B6,B7}.p2	AK159199|Lox|16948|lysyl oxidase	AK159263|Lox|16948|lysyl oxidase	AK166386|Lox|16948|lysyl oxidase	BC018439|Lox|16948|lysyl oxidase	AK141995|Lox|16948|lysyl oxidase	NM_010728|Lox|16948|lysyl oxidase
mm9_v1_chr14_-_73762933_73762949	0.463716	HOX{A6,A7,B6,B7}.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr17_-_87846158_87846274	0.463489	HOX{A6,A7,B6,B7}.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr5_-_141096711_141096848	0.463267	HOX{A6,A7,B6,B7}.p2	AK019322|Ttyh3|78339|tweety homolog 3 (Drosophila)
mm9_v1_chr8_-_122086343_122086607	0.462726	HOX{A6,A7,B6,B7}.p2	BC037193|Hsdl1|72552|hydroxysteroid dehydrogenase like 1	BC038480|Hsdl1|72552|hydroxysteroid dehydrogenase like 1	BC058121|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr13_-_54652983_54653158	0.462099	HOX{A6,A7,B6,B7}.p2	AK216925|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK206564|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK215484|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK216083|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK218676|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr2_+_152987036_152987075	0.461473	HOX{A6,A7,B6,B7}.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr14_-_19071459_19071620	0.458967	HOX{A6,A7,B6,B7}.p2	BC096461|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK079075|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK054522|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	U12142|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	NM_011584|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2
mm9_v1_chr7_-_88638540_88638668	0.456935	HOX{A6,A7,B6,B7}.p2	BC024722|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	AK134504|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	BC139378|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	BC139379|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	AY528675|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	AK138496|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit
mm9_v1_chr2_+_127096432_127096565	0.45642	HOX{A6,A7,B6,B7}.p2	AK083125|Stard7|99138|START domain containing 7	AK044519|Stard7|99138|START domain containing 7
mm9_v1_chr13_-_96661704_96661910	0.456171	HOX{A6,A7,B6,B7}.p2	BC094939|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC052916|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK080384|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK147360|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC150958|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK142813|Iqgap2|544963|IQ motif containing GTPase activating protein 2	NM_027711|Iqgap2|544963|IQ motif containing GTPase activating protein 2
mm9_v1_chr7_-_88638744_88638780	0.454978	HOX{A6,A7,B6,B7}.p2	AK047482|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit
mm9_v1_chr3_+_32335072_32335127	0.454209	HOX{A6,A7,B6,B7}.p2	BC089038|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	NM_008839|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	BC130228|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	U03279|Pik3ca|18706|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm9_v1_chrX_+_10294707_10294726	0.453737	HOX{A6,A7,B6,B7}.p2	AK131619|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK014143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr10_-_59414516_59414582	0.453329	HOX{A6,A7,B6,B7}.p2	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr16_+_88829238_88829254	0.452891	HOX{A6,A7,B6,B7}.p2	AK132534|Krtap15|26560|keratin associated protein 15	NM_013713|Krtap15|26560|keratin associated protein 15	BC116219|Krtap15|26560|keratin associated protein 15
mm9_v1_chr2_+_163842411_163842512	0.451732	HOX{A6,A7,B6,B7}.p2	AK199528|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr9_+_50561315_50561342	0.451365	HOX{A6,A7,B6,B7}.p2	AK168999|Cryab|12955|crystallin, alpha B
mm9_v1_chr7_-_106289651_106289675	0.451155	HOX{A6,A7,B6,B7}.p2	NM_178635|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr13_-_23666058_23666058	0.451057	HOX{A6,A7,B6,B7}.p2	NM_178195|Hist1h2bf|319180|histone cluster 1, H2bf
mm9_v1_chr15_-_35867898_35868000	0.450875	HOX{A6,A7,B6,B7}.p2	BC024666|Cox6c|12864|cytochrome c oxidase, subunit VIc	AK013459|Cox6c|12864|cytochrome c oxidase, subunit VIc	AK012602|Cox6c|12864|cytochrome c oxidase, subunit VIc	AK156268|Cox6c|12864|cytochrome c oxidase, subunit VIc	NM_053071|Cox6c|12864|cytochrome c oxidase, subunit VIc
mm9_v1_chr11_+_100181296_100181331	0.449838	HOX{A6,A7,B6,B7}.p2	AK150813|Eif1|20918|eukaryotic translation initiation factor 1	AK151575|Eif1|20918|eukaryotic translation initiation factor 1	AK152194|Eif1|20918|eukaryotic translation initiation factor 1	AK169763|Eif1|20918|eukaryotic translation initiation factor 1	AK148032|Eif1|20918|eukaryotic translation initiation factor 1	AK151070|Eif1|20918|eukaryotic translation initiation factor 1	BC003463|Eif1|20918|eukaryotic translation initiation factor 1	NM_011508|Eif1|20918|eukaryotic translation initiation factor 1	BC081429|Eif1|20918|eukaryotic translation initiation factor 1	AF129888|Eif1|20918|eukaryotic translation initiation factor 1	BC010791|Eif1|20918|eukaryotic translation initiation factor 1	BC096691|Eif1|20918|eukaryotic translation initiation factor 1	BC096656|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr11_+_75570317_75570388	0.44946	HOX{A6,A7,B6,B7}.p2	AK188896|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK201131|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr1_-_171899306_171899335	0.449069	HOX{A6,A7,B6,B7}.p2	Y15733|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	AK077914|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	NM_010476|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7
mm9_v1_chr6_+_108163089_108163111	0.448716	HOX{A6,A7,B6,B7}.p2	AK047719|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	AK137477|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	NM_010585|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	X15373|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr3_-_152645206_152645210	0.4482	HOX{A6,A7,B6,B7}.p2	AK042683|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr13_+_8202111_8202186	0.447999	HOX{A6,A7,B6,B7}.p2	AK134964|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK051460|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK043249|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139079|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139273|Adarb2|94191|adenosine deaminase, RNA-specific, B2	NM_052977|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC059822|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK046083|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK033916|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK045538|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC052426|Adarb2|94191|adenosine deaminase, RNA-specific, B2
mm9_v1_chr7_-_20282950_20283001	0.447893	HOX{A6,A7,B6,B7}.p2	M73490|Apoe|11816|apolipoprotein E
mm9_v1_chr3_+_114606995_114607339	0.447478	HOX{A6,A7,B6,B7}.p2	AK049612|Olfm3|229759|olfactomedin 3	AK044605|Olfm3|229759|olfactomedin 3	AK045482|Olfm3|229759|olfactomedin 3	AK038569|Olfm3|229759|olfactomedin 3	AK079315|Olfm3|229759|olfactomedin 3	AK044325|Olfm3|229759|olfactomedin 3	AK137414|Olfm3|229759|olfactomedin 3	AF442825|Olfm3|229759|olfactomedin 3	NM_153458|Olfm3|229759|olfactomedin 3	BC112422|Olfm3|229759|olfactomedin 3	BC113129|Olfm3|229759|olfactomedin 3
mm9_v1_chr5_-_114292851_114293254	0.447337	HOX{A6,A7,B6,B7}.p2	AK201602|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr15_+_61816895_61816942	0.44713	HOX{A6,A7,B6,B7}.p2	NM_001177352|Myc|17869|myelocytomatosis oncogene	NM_001177353|Myc|17869|myelocytomatosis oncogene	NM_001177354|Myc|17869|myelocytomatosis oncogene	NM_010849|Myc|17869|myelocytomatosis oncogene	X01023|Myc|17869|myelocytomatosis oncogene	AK145084|Myc|17869|myelocytomatosis oncogene
mm9_v1_chr17_-_24211852_24211965	0.446027	HOX{A6,A7,B6,B7}.p2	AK079579|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr10_-_26095736_26095813	0.445302	HOX{A6,A7,B6,B7}.p2	BC082309|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK031398|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr10_+_4795860_4795872	0.444163	HOX{A6,A7,B6,B7}.p2	AK044459|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr12_-_93087514_93087619	0.444139	HOX{A6,A7,B6,B7}.p2	AF063095|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160936|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	BC026816|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005023|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK146022|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK161546|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160420|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005544|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK220502|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_001039089|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_011344|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)
mm9_v1_chr17_-_36035368_36035398	0.443306	HOX{A6,A7,B6,B7}.p2	AK177921|Atat1|73242|alpha tubulin acetyltransferase 1
mm9_v1_chr5_-_143667004_143667334	0.443083	HOX{A6,A7,B6,B7}.p2	AK218610|Actb|11461|actin, beta	AK206771|Actb|11461|actin, beta	AK208252|Actb|11461|actin, beta	AK202772|Actb|11461|actin, beta	M12481|Actb|11461|actin, beta	X03765|Actb|11461|actin, beta	EF095208|Actb|11461|actin, beta
mm9_v1_chr8_+_97605137_97605189	0.442159	HOX{A6,A7,B6,B7}.p2	AK010364|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK037858|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK034103|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK136322|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK031630|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK049345|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK087973|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	BC045200|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1
mm9_v1_chr2_-_148263617_148263709	0.442087	HOX{A6,A7,B6,B7}.p2	AK161779|Cd93|17064|CD93 antigen	AK150385|Cd93|17064|CD93 antigen
mm9_v1_chr15_-_53733989_53734012	0.441356	HOX{A6,A7,B6,B7}.p2	AK044142|Samd12|320679|sterile alpha motif domain containing 12	BC119383|Samd12|320679|sterile alpha motif domain containing 12	BC119385|Samd12|320679|sterile alpha motif domain containing 12	BC144982|Samd12|320679|sterile alpha motif domain containing 12	NM_177225|Samd12|320679|sterile alpha motif domain containing 12
mm9_v1_chr13_+_51245730_51245816	0.441001	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_+_108026391_108026398	0.440214	HOX{A6,A7,B6,B7}.p2	AK049889|Rpap2|231571|RNA polymerase II associated protein 2	NM_001163462|Rpap2|231571|RNA polymerase II associated protein 2
mm9_v1_chr14_+_112074336_112074336	0.439802	HOX{A6,A7,B6,B7}.p2	NM_198865|Slitrk5|75409|SLIT and NTRK-like family, member 5
mm9_v1_chr19_+_46730385_46730488	0.439637	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_-_72237590_72237690	0.438202	HOX{A6,A7,B6,B7}.p2	AK012712|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK171071|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AF150101|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC028435|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC024370|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK018764|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK165848|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024853|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024854|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_013896|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK172179|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)
mm9_v1_chr5_+_13399301_13399308	0.437644	HOX{A6,A7,B6,B7}.p2	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr2_-_25078049_25078090	0.437399	HOX{A6,A7,B6,B7}.p2	AK194925|Tubb2c|227613|tubulin, beta 2C	AK214079|Tubb2c|227613|tubulin, beta 2C
mm9_v1_chr2_+_124436328_124436346	0.437392	HOX{A6,A7,B6,B7}.p2	AK084922|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AK031307|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr3_-_107820705_107820751	0.436428	HOX{A6,A7,B6,B7}.p2	J03952|Gstm1|14862|glutathione S-transferase, mu 1	BC003822|Gstm1|14862|glutathione S-transferase, mu 1	BC091763|Gstm1|14862|glutathione S-transferase, mu 1	BC046758|Gstm1|14862|glutathione S-transferase, mu 1
mm9_v1_chr12_-_100688283_100688306	0.43633	HOX{A6,A7,B6,B7}.p2	NM_183186|Foxn3|71375|forkhead box N3	AK148970|Foxn3|71375|forkhead box N3
mm9_v1_chr19_+_10271150_10271263	0.43468	HOX{A6,A7,B6,B7}.p2	AK191356|Fads1|76267|fatty acid desaturase 1	AK199659|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr15_+_58770843_58770951	0.434627	HOX{A6,A7,B6,B7}.p2	AJ300739|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm9_v1_chr16_+_91648097_91648146	0.434297	HOX{A6,A7,B6,B7}.p2	AK019312|Son|20658|Son DNA binding protein	BC061113|Son|20658|Son DNA binding protein	AK019081|Son|20658|Son DNA binding protein	AF193607|Son|20658|Son DNA binding protein	AK008256|Son|20658|Son DNA binding protein	AK008478|Son|20658|Son DNA binding protein	BC145121|Son|20658|Son DNA binding protein	BC046419|Son|20658|Son DNA binding protein	BC051200|Son|20658|Son DNA binding protein	BC055728|Son|20658|Son DNA binding protein
mm9_v1_chr5_-_92497375_92497432	0.434237	HOX{A6,A7,B6,B7}.p2	AK200302|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr14_+_55502261_55502285	0.433599	HOX{A6,A7,B6,B7}.p2	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr7_+_119253816_119253899	0.433567	HOX{A6,A7,B6,B7}.p2	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr11_+_92959670_92959804	0.433174	HOX{A6,A7,B6,B7}.p2	AK012302|Car10|72605|carbonic anhydrase 10	AB080741|Car10|72605|carbonic anhydrase 10	BC066111|Car10|72605|carbonic anhydrase 10	AK038695|Car10|72605|carbonic anhydrase 10
mm9_v1_chr2_-_35892046_35892111	0.432445	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_88851662_88851783	0.432028	HOX{A6,A7,B6,B7}.p2	AJ012076|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr16_+_13358513_13358556	0.431801	HOX{A6,A7,B6,B7}.p2	NM_153588|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr16_-_35313780_35313815	0.431588	HOX{A6,A7,B6,B7}.p2	AK085223|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK164647|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr5_+_81450617_81450617	0.430639	HOX{A6,A7,B6,B7}.p2	BC088989|Lphn3|319387|latrophilin 3	NM_198702|Lphn3|319387|latrophilin 3
mm9_v1_chr2_+_121135107_121135172	0.430047	HOX{A6,A7,B6,B7}.p2	AK079600|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr6_-_90611092_90611239	0.429729	HOX{A6,A7,B6,B7}.p2	BC043918|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr17_+_13208071_13208135	0.429667	HOX{A6,A7,B6,B7}.p2	AK206580|Sod2|20656|superoxide dismutase 2, mitochondrial
mm9_v1_chr19_+_27291507_27291624	0.429661	HOX{A6,A7,B6,B7}.p2	AK044683|Vldlr|22359|very low density lipoprotein receptor	AK076172|Vldlr|22359|very low density lipoprotein receptor	NM_001161420|Vldlr|22359|very low density lipoprotein receptor	NM_013703|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr8_-_86095743_86095784	0.429631	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_125141525_125141634	0.429606	HOX{A6,A7,B6,B7}.p2	BC029133|Ncapd2|68298|non-SMC condensin I complex, subunit D2	AK129068|Ncapd2|68298|non-SMC condensin I complex, subunit D2	BC026982|Ncapd2|68298|non-SMC condensin I complex, subunit D2	NM_146171|Ncapd2|68298|non-SMC condensin I complex, subunit D2	BC025460|Ncapd2|68298|non-SMC condensin I complex, subunit D2	AK156143|Ncapd2|68298|non-SMC condensin I complex, subunit D2
mm9_v1_chr2_-_27330682_27330707	0.429191	HOX{A6,A7,B6,B7}.p2	BC031536|Brd3|67382|bromodomain containing 3
mm9_v1_chr3_-_86590158_86590303	0.428871	HOX{A6,A7,B6,B7}.p2	AK205115|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr18_+_35776026_35776084	0.427298	HOX{A6,A7,B6,B7}.p2	AK012839|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr6_+_113433507_113433615	0.427068	HOX{A6,A7,B6,B7}.p2	BC029065|Creld1|171508|cysteine-rich with EGF-like domains 1	AK155777|Creld1|171508|cysteine-rich with EGF-like domains 1	AB009020|Creld1|171508|cysteine-rich with EGF-like domains 1	BC010804|Creld1|171508|cysteine-rich with EGF-like domains 1	BC023893|Creld1|171508|cysteine-rich with EGF-like domains 1	NM_133930|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr9_-_21731973_21732007	0.424837	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_55136989_55137052	0.424763	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr17_+_44090341_44090399	0.423691	HOX{A6,A7,B6,B7}.p2	BC047153|Rcan2|53901|regulator of calcineurin 2	AF237887|Rcan2|53901|regulator of calcineurin 2	AF237791|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr6_-_120745648_120745709	0.42217	HOX{A6,A7,B6,B7}.p2	AK201997|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK196381|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1
mm9_v1_chr2_+_145686480_145686484	0.421291	HOX{A6,A7,B6,B7}.p2	AK171064|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr5_+_77380762_77380839	0.420817	HOX{A6,A7,B6,B7}.p2	AK002669|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK079282|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK166264|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK013426|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK075949|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK010462|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	BC018153|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr12_-_73509925_73510040	0.420625	HOX{A6,A7,B6,B7}.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr12_-_12948513_12948641	0.420042	HOX{A6,A7,B6,B7}.p2	BC005453|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK144126|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146913|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146696|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_008709|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm9_v1_chr9_+_99529985_99530013	0.419589	HOX{A6,A7,B6,B7}.p2	AK012132|Dzip1l|72507|DAZ interacting protein 1-like	AK208844|Dzip1l|72507|DAZ interacting protein 1-like	BC099950|Dzip1l|72507|DAZ interacting protein 1-like	NM_028258|Dzip1l|72507|DAZ interacting protein 1-like
mm9_v1_chr14_-_73762324_73762328	0.419099	HOX{A6,A7,B6,B7}.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr10_-_30375572_30375672	0.418612	HOX{A6,A7,B6,B7}.p2	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr18_+_37581071_37581102	0.418312	HOX{A6,A7,B6,B7}.p2	AK078189|Pcdhb11|93882|protocadherin beta 11	NM_053136|Pcdhb11|93882|protocadherin beta 11	AK160803|Pcdhb11|93882|protocadherin beta 11
mm9_v1_chr2_+_120393393_120393485	0.417619	HOX{A6,A7,B6,B7}.p2	AK019162|Snap23|20619|synaptosomal-associated protein 23	NM_001177792|Snap23|20619|synaptosomal-associated protein 23	NM_001177793|Snap23|20619|synaptosomal-associated protein 23	NM_009222|Snap23|20619|synaptosomal-associated protein 23	AK171763|Snap23|20619|synaptosomal-associated protein 23	AK017311|Snap23|20619|synaptosomal-associated protein 23	BC070456|Snap23|20619|synaptosomal-associated protein 23	AB007444|Snap23|20619|synaptosomal-associated protein 23
mm9_v1_chr2_+_90858663_90858815	0.416948	HOX{A6,A7,B6,B7}.p2	AK080832|Celf1|13046|CUGBP, Elav-like family member 1	AK160135|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr14_-_47006944_47006954	0.41681	HOX{A6,A7,B6,B7}.p2	BC052846|Bmp4|12159|bone morphogenetic protein 4
mm9_v1_chr14_+_124059330_124059403	0.416539	HOX{A6,A7,B6,B7}.p2	AK051773|Itgbl1|223272|integrin, beta-like 1	NM_145467|Itgbl1|223272|integrin, beta-like 1	BC020152|Itgbl1|223272|integrin, beta-like 1	AK029068|Itgbl1|223272|integrin, beta-like 1
mm9_v1_chr16_-_85901362_85901374	0.416415	HOX{A6,A7,B6,B7}.p2	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr9_+_107199019_107199063	0.415887	HOX{A6,A7,B6,B7}.p2	AK077338|Cish|12700|cytokine inducible SH2-containing protein	NM_009895|Cish|12700|cytokine inducible SH2-containing protein
mm9_v1_chr12_+_86814822_86814862	0.41561	HOX{A6,A7,B6,B7}.p2	AK154418|Fos|14281|FBJ osteosarcoma oncogene	BC029814|Fos|14281|FBJ osteosarcoma oncogene	NM_010234|Fos|14281|FBJ osteosarcoma oncogene
mm9_v1_chr2_-_27102703_27102843	0.415332	HOX{A6,A7,B6,B7}.p2	AK159236|Sardh|192166|sarcosine dehydrogenase	AK159681|Sardh|192166|sarcosine dehydrogenase	AK159704|Sardh|192166|sarcosine dehydrogenase
mm9_v1_chr11_-_21901563_21901712	0.413789	HOX{A6,A7,B6,B7}.p2	BC057105|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK083671|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK050758|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK083434|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK042975|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK158588|Otx1|18423|orthodenticle homolog 1 (Drosophila)	NM_011023|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK049430|Otx1|18423|orthodenticle homolog 1 (Drosophila)
mm9_v1_chr3_-_88307024_88307186	0.412612	HOX{A6,A7,B6,B7}.p2	DQ832702|Lmna|16905|lamin A	DQ832703|Lmna|16905|lamin A	AK161221|Lmna|16905|lamin A	BC094020|Lmna|16905|lamin A	BC015302|Lmna|16905|lamin A	AK153295|Lmna|16905|lamin A
mm9_v1_chr17_-_27717231_27717234	0.41065	HOX{A6,A7,B6,B7}.p2	AK178513|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm9_v1_chr9_-_117160916_117161040	0.410187	HOX{A6,A7,B6,B7}.p2	BC117840|Rbms3|207181|RNA binding motif, single stranded interacting protein	BC117841|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr2_+_97307652_97307938	0.409838	HOX{A6,A7,B6,B7}.p2	AK032467|Lrrc4c|241568|leucine rich repeat containing 4C	AK032088|Lrrc4c|241568|leucine rich repeat containing 4C	NM_178725|Lrrc4c|241568|leucine rich repeat containing 4C	BC094588|Lrrc4c|241568|leucine rich repeat containing 4C
mm9_v1_chr7_-_89079335_89079355	0.409511	HOX{A6,A7,B6,B7}.p2	AK045542|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	NM_013886|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr15_+_3229159_3229218	0.408642	HOX{A6,A7,B6,B7}.p2	AK183252|Sepp1|20363|selenoprotein P, plasma, 1	AK190256|Sepp1|20363|selenoprotein P, plasma, 1	AK199458|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr7_+_25292201_25292230	0.408582	HOX{A6,A7,B6,B7}.p2	BC096675|Zfp428|232969|zinc finger protein 428	BC024802|Zfp428|232969|zinc finger protein 428	AK010415|Zfp428|232969|zinc finger protein 428
mm9_v1_chr18_+_37966017_37966102	0.408241	HOX{A6,A7,B6,B7}.p2	AK089310|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC059175|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	NM_033581|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC098457|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr4_+_85699818_85699939	0.407831	HOX{A6,A7,B6,B7}.p2	NM_029967|Adamtsl1|77739|ADAMTS-like 1	AK020115|Adamtsl1|77739|ADAMTS-like 1	BC062814|Adamtsl1|77739|ADAMTS-like 1	AK045085|Adamtsl1|77739|ADAMTS-like 1	BC139339|Adamtsl1|77739|ADAMTS-like 1	BC139367|Adamtsl1|77739|ADAMTS-like 1
mm9_v1_chr3_+_90341208_90341304	0.407743	HOX{A6,A7,B6,B7}.p2	AK160178|S100a16|67860|S100 calcium binding protein A16	AK009762|S100a16|67860|S100 calcium binding protein A16	AK160512|S100a16|67860|S100 calcium binding protein A16	AK167006|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr9_+_50560862_50561082	0.407495	HOX{A6,A7,B6,B7}.p2	NM_009964|Cryab|12955|crystallin, alpha B
mm9_v1_chr5_+_14514906_14514924	0.407086	HOX{A6,A7,B6,B7}.p2	NM_001110796|Pclo|26875|piccolo (presynaptic cytomatrix protein)	NM_011995|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19185|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19186|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr5_-_149363829_149363890	0.405339	HOX{A6,A7,B6,B7}.p2	AK198634|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr3_-_108707417_108707441	0.405193	HOX{A6,A7,B6,B7}.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr15_-_57723743_57723862	0.404258	HOX{A6,A7,B6,B7}.p2	AK203076|Derl1|67819|Der1-like domain family, member 1	AK207504|Derl1|67819|Der1-like domain family, member 1	AK218964|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr18_-_75857207_75857349	0.403752	HOX{A6,A7,B6,B7}.p2	BC058104|Ctif|269037|CBP80/20-dependent translation initiation factor	NM_201354|Ctif|269037|CBP80/20-dependent translation initiation factor
mm9_v1_chr13_-_36826245_36826363	0.403134	HOX{A6,A7,B6,B7}.p2	AK161859|Nrn1|68404|neuritin 1	BC035531|Nrn1|68404|neuritin 1	NM_153529|Nrn1|68404|neuritin 1
mm9_v1_chr19_+_23241546_23241602	0.402758	HOX{A6,A7,B6,B7}.p2	AK009928|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr18_-_24761954_24762029	0.402614	HOX{A6,A7,B6,B7}.p2	BC055012|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr4_+_48552806_48552952	0.402569	HOX{A6,A7,B6,B7}.p2	AK075956|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145925|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK017795|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK011381|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145924|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr3_+_105261699_105261733	0.402291	HOX{A6,A7,B6,B7}.p2	BC141097|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	BC141098|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107781|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107782|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	NM_019931|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr1_+_160292665_160292848	0.401958	HOX{A6,A7,B6,B7}.p2	AK147450|Astn1|11899|astrotactin 1	AK138576|Astn1|11899|astrotactin 1	AK045561|Astn1|11899|astrotactin 1	AK165200|Astn1|11899|astrotactin 1	U48797|Astn1|11899|astrotactin 1	AB093222|Astn1|11899|astrotactin 1
mm9_v1_chr18_+_37454493_37454629	0.401173	HOX{A6,A7,B6,B7}.p2	NM_053127|Pcdhb2|93873|protocadherin beta 2	BC021789|Pcdhb2|93873|protocadherin beta 2	BC141154|Pcdhb2|93873|protocadherin beta 2	AY013781|Pcdhb2|93873|protocadherin beta 2
mm9_v1_chr1_-_175297624_175297771	0.400769	HOX{A6,A7,B6,B7}.p2	AY059393|Cadm3|94332|cell adhesion molecule 3	BC115417|Cadm3|94332|cell adhesion molecule 3	BC115418|Cadm3|94332|cell adhesion molecule 3	BC079837|Cadm3|94332|cell adhesion molecule 3	AF195662|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chrX_-_100381703_100381961	0.399793	HOX{A6,A7,B6,B7}.p2	BC115708|Nap1l2|17954|nucleosome assembly protein 1-like 2	BC115761|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK051439|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK131621|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK077430|Nap1l2|17954|nucleosome assembly protein 1-like 2
mm9_v1_chr4_-_153532466_153532665	0.398751	HOX{A6,A7,B6,B7}.p2	AK182064|Tprgl|67808|transformation related protein 63 regulated like
mm9_v1_chr1_-_180259089_180259120	0.398508	HOX{A6,A7,B6,B7}.p2	AK049600|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr7_-_110976438_110976438	0.398255	HOX{A6,A7,B6,B7}.p2	M10524|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr5_+_117724658_117724663	0.397663	HOX{A6,A7,B6,B7}.p2	AK013486|Taok3|330177|TAO kinase 3
mm9_v1_chr6_+_79969636_79969636	0.395827	HOX{A6,A7,B6,B7}.p2	NM_178731|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr2_+_129442079_129442192	0.395676	HOX{A6,A7,B6,B7}.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr8_+_82197575_82197613	0.395233	HOX{A6,A7,B6,B7}.p2	BC042641|Otud4|73945|OTU domain containing 4
mm9_v1_chr10_-_61802889_61803289	0.394336	HOX{A6,A7,B6,B7}.p2	AK167468|Hk1|15275|hexokinase 1	AK143630|Hk1|15275|hexokinase 1	NM_001146100|Hk1|15275|hexokinase 1	BC072628|Hk1|15275|hexokinase 1
mm9_v1_chr13_+_23627286_23627290	0.393544	HOX{A6,A7,B6,B7}.p2	NM_145073|Hist1h3g|97908|histone cluster 1, H3g	BC125355|Hist1h3g|97908|histone cluster 1, H3g	BC125357|Hist1h3g|97908|histone cluster 1, H3g
mm9_v1_chr14_+_119379780_119379927	0.392689	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_85763156_85763226	0.391621	HOX{A6,A7,B6,B7}.p2	NM_011595|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chrX_+_98877684_98877720	0.391499	HOX{A6,A7,B6,B7}.p2	AK041765|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr1_+_66514959_66514998	0.39078	HOX{A6,A7,B6,B7}.p2	AK081235|Unc80|329178|unc-80 homolog (C. elegans)	AK044008|Unc80|329178|unc-80 homolog (C. elegans)	BC116429|Unc80|329178|unc-80 homolog (C. elegans)	BC116430|Unc80|329178|unc-80 homolog (C. elegans)
mm9_v1_chr2_-_113057218_113057234	0.389546	HOX{A6,A7,B6,B7}.p2	AK082701|Ryr3|20192|ryanodine receptor 3	D84237|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr8_-_61390372_61390423	0.389484	HOX{A6,A7,B6,B7}.p2	BC111102|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	AK080614|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	NM_175032|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm9_v1_chr4_+_128331945_128331981	0.389392	HOX{A6,A7,B6,B7}.p2	NM_001195130|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr14_+_120674939_120674954	0.388834	HOX{A6,A7,B6,B7}.p2	BC079898|Mbnl2|105559|muscleblind-like 2	BC023895|Mbnl2|105559|muscleblind-like 2	AK148740|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr10_-_36855292_36855411	0.388674	HOX{A6,A7,B6,B7}.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr9_+_69855789_69855998	0.388624	HOX{A6,A7,B6,B7}.p2	AF071429|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161900|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr11_+_54683756_54683778	0.388241	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_-_93426312_93426402	0.385841	HOX{A6,A7,B6,B7}.p2	AK153711|Prickle1|106042|prickle homolog 1 (Drosophila)	NM_001033217|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr8_+_107951514_107951547	0.385724	HOX{A6,A7,B6,B7}.p2	AK133042|Lrrc36|270091|leucine rich repeat containing 36	NM_001033371|Lrrc36|270091|leucine rich repeat containing 36	NM_001170789|Lrrc36|270091|leucine rich repeat containing 36	BC150957|Lrrc36|270091|leucine rich repeat containing 36	BC172120|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr12_+_31950097_31950203	0.385693	HOX{A6,A7,B6,B7}.p2	AK143079|Lamb1|16777|laminin B1	AK051131|Lamb1|16777|laminin B1	NM_008482|Lamb1|16777|laminin B1	AK147313|Lamb1|16777|laminin B1	AK164842|Lamb1|16777|laminin B1	BC150809|Lamb1|16777|laminin B1
mm9_v1_chr18_-_61874531_61874583	0.385426	HOX{A6,A7,B6,B7}.p2	BC024866|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr16_+_94791596_94791654	0.38468	HOX{A6,A7,B6,B7}.p2	AK140323|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr18_-_33623069_33623089	0.383679	HOX{A6,A7,B6,B7}.p2	BC054762|D0H4S114|27528|DNA segment, human D4S114	NM_001109990|D0H4S114|27528|DNA segment, human D4S114	X70398|D0H4S114|27528|DNA segment, human D4S114	AK048361|D0H4S114|27528|DNA segment, human D4S114	AK081502|D0H4S114|27528|DNA segment, human D4S114	AK133769|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr10_+_85763287_85763288	0.380857	HOX{A6,A7,B6,B7}.p2	L27424|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr2_+_121282841_121282867	0.380682	HOX{A6,A7,B6,B7}.p2	AK168506|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC021588|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr18_-_56722155_56722190	0.380441	HOX{A6,A7,B6,B7}.p2	AK189373|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr9_-_59988919_59989026	0.379373	HOX{A6,A7,B6,B7}.p2	BC139329|Thsd4|207596|thrombospondin, type I, domain containing 4	AK045414|Thsd4|207596|thrombospondin, type I, domain containing 4	NM_172444|Thsd4|207596|thrombospondin, type I, domain containing 4
mm9_v1_chr10_+_4795808_4795848	0.379291	HOX{A6,A7,B6,B7}.p2	AF535143|Syne1|64009|synaptic nuclear envelope 1	NM_153399|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr10_+_93977597_93977699	0.37886	HOX{A6,A7,B6,B7}.p2	NM_172051|Tmcc3|319880|transmembrane and coiled coil domains 3	AK132545|Tmcc3|319880|transmembrane and coiled coil domains 3	BC095951|Tmcc3|319880|transmembrane and coiled coil domains 3	AK083129|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr9_+_109905895_109906037	0.377861	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_125502979_125502996	0.377855	HOX{A6,A7,B6,B7}.p2	AK044921|Vwf|22371|Von Willebrand factor homolog	AK083237|Vwf|22371|Von Willebrand factor homolog	AK164450|Vwf|22371|Von Willebrand factor homolog	DQ355287|Vwf|22371|Von Willebrand factor homolog	DQ355288|Vwf|22371|Von Willebrand factor homolog	NM_011708|Vwf|22371|Von Willebrand factor homolog
mm9_v1_chr14_-_54873524_54873603	0.376377	HOX{A6,A7,B6,B7}.p2	BC053379|Dad1|13135|defender against cell death 1	AK006711|Dad1|13135|defender against cell death 1	BC024378|Dad1|13135|defender against cell death 1	AK054480|Dad1|13135|defender against cell death 1	U83628|Dad1|13135|defender against cell death 1	AK030925|Dad1|13135|defender against cell death 1	BC058116|Dad1|13135|defender against cell death 1	AK002446|Dad1|13135|defender against cell death 1	NM_001113358|Dad1|13135|defender against cell death 1	NM_010015|Dad1|13135|defender against cell death 1
mm9_v1_chr18_+_37906739_37906841	0.37633	HOX{A6,A7,B6,B7}.p2	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr2_+_49307207_49307338	0.375962	HOX{A6,A7,B6,B7}.p2	AK047947|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)
mm9_v1_chr11_-_43649708_43649999	0.374359	HOX{A6,A7,B6,B7}.p2	BC138653|Adra1b|11548|adrenergic receptor, alpha 1b	BC138654|Adra1b|11548|adrenergic receptor, alpha 1b	AK043877|Adra1b|11548|adrenergic receptor, alpha 1b	NM_007416|Adra1b|11548|adrenergic receptor, alpha 1b	AK139448|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr7_+_130114059_130114440	0.372733	HOX{A6,A7,B6,B7}.p2	NM_011247|Rbbp6|19647|retinoblastoma binding protein 6	NM_175023|Rbbp6|19647|retinoblastoma binding protein 6	AK081261|Rbbp6|19647|retinoblastoma binding protein 6	AK045635|Rbbp6|19647|retinoblastoma binding protein 6	BC025874|Rbbp6|19647|retinoblastoma binding protein 6
mm9_v1_chr9_+_40590943_40591093	0.370702	HOX{A6,A7,B6,B7}.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr6_+_125502943_125502970	0.370696	HOX{A6,A7,B6,B7}.p2	AK157296|Vwf|22371|Von Willebrand factor homolog
mm9_v1_chr7_-_35597470_35597729	0.370495	HOX{A6,A7,B6,B7}.p2	AK005217|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AF308145|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	BC051124|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AK038952|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AK051290|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_175140|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
mm9_v1_chr10_+_61155793_61155924	0.36974	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_-_72861603_72861646	0.369268	HOX{A6,A7,B6,B7}.p2	AK139438|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr1_-_135817945_135817982	0.369027	HOX{A6,A7,B6,B7}.p2	AK037150|Prelp|116847|proline arginine-rich end leucine-rich repeat	BC019775|Prelp|116847|proline arginine-rich end leucine-rich repeat	AK047480|Prelp|116847|proline arginine-rich end leucine-rich repeat	NM_054077|Prelp|116847|proline arginine-rich end leucine-rich repeat
mm9_v1_chr4_-_43575021_43575140	0.36897	HOX{A6,A7,B6,B7}.p2	AK147228|Tln1|21894|talin 1	AK122420|Tln1|21894|talin 1	BC059711|Tln1|21894|talin 1	BC150810|Tln1|21894|talin 1	X56123|Tln1|21894|talin 1
mm9_v1_chr4_-_128483355_128483429	0.36848	HOX{A6,A7,B6,B7}.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr8_+_74675802_74675827	0.36792	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_88342459_88342597	0.367665	HOX{A6,A7,B6,B7}.p2	AK012557|Mex3a|72640|mex3 homolog A (C. elegans)
mm9_v1_chr11_+_120094240_120094260	0.367153	HOX{A6,A7,B6,B7}.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr11_-_84953442_84953491	0.367149	HOX{A6,A7,B6,B7}.p2	AK170234|Usp32|237898|ubiquitin specific peptidase 32	AK148221|Usp32|237898|ubiquitin specific peptidase 32	NM_001029934|Usp32|237898|ubiquitin specific peptidase 32
mm9_v1_chr17_+_44090139_44090183	0.366741	HOX{A6,A7,B6,B7}.p2	BC049096|Rcan2|53901|regulator of calcineurin 2	NM_030598|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr18_-_38129384_38129452	0.366414	HOX{A6,A7,B6,B7}.p2	BC057367|Fchsd1|319262|FCH and double SH3 domains 1	NM_175684|Fchsd1|319262|FCH and double SH3 domains 1	BC052886|Fchsd1|319262|FCH and double SH3 domains 1	AK154732|Fchsd1|319262|FCH and double SH3 domains 1
mm9_v1_chr19_+_30020236_30020283	0.366285	HOX{A6,A7,B6,B7}.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chr11_+_102977638_102977680	0.366197	HOX{A6,A7,B6,B7}.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr3_+_89049813_89049887	0.364006	HOX{A6,A7,B6,B7}.p2	BC043030|Krtcap2|66059|keratinocyte associated protein 2
mm9_v1_chr18_+_46757333_46757491	0.363826	HOX{A6,A7,B6,B7}.p2	AK019451|Eif1a|13664|eukaryotic translation initiation factor 1A	NM_010120|Eif1a|13664|eukaryotic translation initiation factor 1A	AK013268|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150651|Eif1a|13664|eukaryotic translation initiation factor 1A	AF026481|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150673|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150677|Eif1a|13664|eukaryotic translation initiation factor 1A	AK009026|Eif1a|13664|eukaryotic translation initiation factor 1A	AK166368|Eif1a|13664|eukaryotic translation initiation factor 1A	BC027437|Eif1a|13664|eukaryotic translation initiation factor 1A	AK167333|Eif1a|13664|eukaryotic translation initiation factor 1A
mm9_v1_chr14_-_37938397_37938468	0.36321	HOX{A6,A7,B6,B7}.p2	AK210138|Ghitm|66092|growth hormone inducible transmembrane protein
mm9_v1_chr8_-_87366624_87366670	0.36194	HOX{A6,A7,B6,B7}.p2	X56603|Calr|12317|calreticulin
mm9_v1_chr16_-_38800293_38800318	0.361684	HOX{A6,A7,B6,B7}.p2	BC046604|Upk1b|22268|uroplakin 1B	AK083101|Upk1b|22268|uroplakin 1B	AK086926|Upk1b|22268|uroplakin 1B	AK053004|Upk1b|22268|uroplakin 1B	NM_178924|Upk1b|22268|uroplakin 1B
mm9_v1_chr14_-_104243474_104243491	0.361345	HOX{A6,A7,B6,B7}.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr3_+_95238406_95238462	0.360722	HOX{A6,A7,B6,B7}.p2	AK141362|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U10325|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U14333|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr15_-_53734033_53734098	0.360697	HOX{A6,A7,B6,B7}.p2	AK032588|Samd12|320679|sterile alpha motif domain containing 12	AK080536|Samd12|320679|sterile alpha motif domain containing 12
mm9_v1_chrX_+_90920450_90920749	0.360637	HOX{A6,A7,B6,B7}.p2	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr15_-_35867884_35867894	0.359605	HOX{A6,A7,B6,B7}.p2	BC094413|Cox6c|12864|cytochrome c oxidase, subunit VIc
mm9_v1_chr10_-_90612412_90612509	0.35933	HOX{A6,A7,B6,B7}.p2	AK208952|Tmpo|21917|thymopoietin
mm9_v1_chr12_+_104626888_104626975	0.358673	HOX{A6,A7,B6,B7}.p2	NM_026580|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK076336|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	NM_001177841|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	BC049551|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK016449|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK160505|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK019830|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006346|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006469|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006054|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	BC052409|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2
mm9_v1_chr11_-_97049185_97049278	0.358646	HOX{A6,A7,B6,B7}.p2	BC055115|Kpnb1|16211|karyopherin (importin) beta 1	AK077709|Kpnb1|16211|karyopherin (importin) beta 1	NM_008379|Kpnb1|16211|karyopherin (importin) beta 1	AK147175|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr8_+_96561162_96561175	0.358389	HOX{A6,A7,B6,B7}.p2	AK166343|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr6_+_54222814_54222856	0.358368	HOX{A6,A7,B6,B7}.p2	BC051139|Chn2|69993|chimerin (chimaerin) 2	NM_023543|Chn2|69993|chimerin (chimaerin) 2	BC141060|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr4_+_109650629_109650657	0.357998	HOX{A6,A7,B6,B7}.p2	NM_172296|Dmrta2|242620|doublesex and mab-3 related transcription factor like family A2	AK080774|Dmrta2|242620|doublesex and mab-3 related transcription factor like family A2	AY145837|Dmrta2|242620|doublesex and mab-3 related transcription factor like family A2
mm9_v1_chr1_-_180260325_180260384	0.357506	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_74676404_74676467	0.356509	HOX{A6,A7,B6,B7}.p2	AK205532|Tpm4|326618|tropomyosin 4	AK207661|Tpm4|326618|tropomyosin 4
mm9_v1_chr5_+_136363810_136363893	0.356198	HOX{A6,A7,B6,B7}.p2	BC018257|Hspb1|15507|heat shock protein 1	AK003119|Hspb1|15507|heat shock protein 1	AK168927|Hspb1|15507|heat shock protein 1	AK010663|Hspb1|15507|heat shock protein 1	X14686|Hspb1|15507|heat shock protein 1	BC090388|Hspb1|15507|heat shock protein 1	BC099463|Hspb1|15507|heat shock protein 1
mm9_v1_chr14_+_70930491_70930682	0.355292	HOX{A6,A7,B6,B7}.p2	AK087125|Lgi3|213469|leucine-rich repeat LGI family, member 3	NM_145219|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK132296|Lgi3|213469|leucine-rich repeat LGI family, member 3	AF515590|Lgi3|213469|leucine-rich repeat LGI family, member 3	AY174077|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK049831|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK163664|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK047495|Lgi3|213469|leucine-rich repeat LGI family, member 3
mm9_v1_chr10_-_61802814_61802882	0.354145	HOX{A6,A7,B6,B7}.p2	AK214520|Hk1|15275|hexokinase 1	J05277|Hk1|15275|hexokinase 1	BC027316|Hk1|15275|hexokinase 1	AK149749|Hk1|15275|hexokinase 1
mm9_v1_chr6_-_38074549_38074585	0.353859	HOX{A6,A7,B6,B7}.p2	AK165464|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AF435090|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK128892|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK143790|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	NM_080467|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4
mm9_v1_chr9_-_49351134_49351163	0.353436	HOX{A6,A7,B6,B7}.p2	X59306|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr2_-_71205805_71205881	0.352669	HOX{A6,A7,B6,B7}.p2	BC024952|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr13_+_15555483_15555555	0.352208	HOX{A6,A7,B6,B7}.p2	AK158261|Gli3|14634|GLI-Kruppel family member GLI3	NM_008130|Gli3|14634|GLI-Kruppel family member GLI3
mm9_v1_chr7_+_71537652_71537662	0.351688	HOX{A6,A7,B6,B7}.p2	BC038157|Mcee|73724|methylmalonyl CoA epimerase	NM_028626|Mcee|73724|methylmalonyl CoA epimerase	AK003511|Mcee|73724|methylmalonyl CoA epimerase
mm9_v1_chr2_+_163264188_163264268	0.350816	HOX{A6,A7,B6,B7}.p2	NM_144891|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK164991|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK140488|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK141371|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	BC019941|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1
mm9_v1_chr12_-_73337534_73337705	0.350208	HOX{A6,A7,B6,B7}.p2	AK013731|Rtn1|104001|reticulon 1	AK014358|Rtn1|104001|reticulon 1
mm9_v1_chr11_+_75570397_75570437	0.349904	HOX{A6,A7,B6,B7}.p2	AK011612|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr2_+_162880370_162880424	0.349778	HOX{A6,A7,B6,B7}.p2	AK028497|Mybl2|17865|myeloblastosis oncogene-like 2	NM_008652|Mybl2|17865|myeloblastosis oncogene-like 2	X70472|Mybl2|17865|myeloblastosis oncogene-like 2	BC050842|Mybl2|17865|myeloblastosis oncogene-like 2
mm9_v1_chr4_-_11131570_11131684	0.34944	HOX{A6,A7,B6,B7}.p2	AK050920|Ints8|72656|integrator complex subunit 8
mm9_v1_chr8_-_67071497_67071512	0.349418	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_87169699_87169719	0.348763	HOX{A6,A7,B6,B7}.p2	AK154953|Zfp710|209225|zinc finger protein 710	NM_001145999|Zfp710|209225|zinc finger protein 710	NM_001146000|Zfp710|209225|zinc finger protein 710	AK154871|Zfp710|209225|zinc finger protein 710
mm9_v1_chr17_+_73457324_73457400	0.348637	HOX{A6,A7,B6,B7}.p2	NM_001081071|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177967|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177968|Lclat1|225010|lysocardiolipin acyltransferase 1	AK144580|Lclat1|225010|lysocardiolipin acyltransferase 1	BC147499|Lclat1|225010|lysocardiolipin acyltransferase 1	BC150884|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158076|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158079|Lclat1|225010|lysocardiolipin acyltransferase 1
mm9_v1_chr3_+_159502766_159502808	0.348599	HOX{A6,A7,B6,B7}.p2	AK209732|Wls|68151|wntless homolog (Drosophila)	AK212097|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr10_+_13686829_13686966	0.347699	HOX{A6,A7,B6,B7}.p2	AK040673|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK172056|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr11_-_99997241_99997264	0.347281	HOX{A6,A7,B6,B7}.p2	BC057934|Krt15|16665|keratin 15	NM_008469|Krt15|16665|keratin 15
mm9_v1_chr9_+_27598531_27598731	0.346114	HOX{A6,A7,B6,B7}.p2	AK158538|Opcml|330908|opioid binding protein/cell adhesion molecule-like
mm9_v1_chr3_-_133207209_133207353	0.34559	HOX{A6,A7,B6,B7}.p2	AK155776|Tet2|214133|tet oncogene family member 2	DQ079067|Tet2|214133|tet oncogene family member 2	NM_001040400|Tet2|214133|tet oncogene family member 2
mm9_v1_chr8_+_96561097_96561129	0.345004	HOX{A6,A7,B6,B7}.p2	AK029629|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_001093757|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_177767|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK156765|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr2_-_105227142_105227176	0.344831	HOX{A6,A7,B6,B7}.p2	BC051551|Rcn1|19672|reticulocalbin 1
mm9_v1_chr8_+_96561135_96561146	0.344266	HOX{A6,A7,B6,B7}.p2	AK049824|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC040267|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr1_-_42724504_42724516	0.343987	HOX{A6,A7,B6,B7}.p2	BC049671|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chrX_+_20425667_20425723	0.343461	HOX{A6,A7,B6,B7}.p2	NM_001159645|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	NM_009703|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK169757|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK133797|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK163567|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK039044|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK085823|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK135358|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	BC004757|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr3_-_122687238_122687429	0.343145	HOX{A6,A7,B6,B7}.p2	AK040332|Usp53|99526|ubiquitin specific peptidase 53	AK140453|Usp53|99526|ubiquitin specific peptidase 53	BC096383|Usp53|99526|ubiquitin specific peptidase 53	AK036876|Usp53|99526|ubiquitin specific peptidase 53	NM_133857|Usp53|99526|ubiquitin specific peptidase 53	AK030317|Usp53|99526|ubiquitin specific peptidase 53	AK045953|Usp53|99526|ubiquitin specific peptidase 53
mm9_v1_chr14_-_46277772_46277802	0.343059	HOX{A6,A7,B6,B7}.p2	AK155294|Ddhd1|114874|DDHD domain containing 1	AK170271|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chrX_-_133277456_133277461	0.342089	HOX{A6,A7,B6,B7}.p2	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr5_-_74464390_74464465	0.341825	HOX{A6,A7,B6,B7}.p2	BC039916|Usp46|69727|ubiquitin specific peptidase 46	NM_177561|Usp46|69727|ubiquitin specific peptidase 46	AK145298|Usp46|69727|ubiquitin specific peptidase 46
mm9_v1_chr14_+_63761507_63761880	0.34083	HOX{A6,A7,B6,B7}.p2	AK201025|Ctsb|13030|cathepsin B	AK201162|Ctsb|13030|cathepsin B	AF062526|Ctsb|13030|cathepsin B
mm9_v1_chr10_-_6606128_6606213	0.339198	HOX{A6,A7,B6,B7}.p2	AK033676|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	AK034403|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	NM_001159942|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm9_v1_chr18_+_42671163_42671217	0.338674	HOX{A6,A7,B6,B7}.p2	AK076993|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AK168434|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AB023485|Tcerg1|56070|transcription elongation regulator 1 (CA150)	BC040284|Tcerg1|56070|transcription elongation regulator 1 (CA150)	BC039185|Tcerg1|56070|transcription elongation regulator 1 (CA150)	BC016542|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr1_-_171899278_171899299	0.338602	HOX{A6,A7,B6,B7}.p2	AK028380|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	AK050211|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	BC011464|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7
mm9_v1_chr6_+_129483295_129483425	0.33845	HOX{A6,A7,B6,B7}.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_-_52552870_52552894	0.337641	HOX{A6,A7,B6,B7}.p2	AK171814|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr16_-_85103501_85103536	0.337437	HOX{A6,A7,B6,B7}.p2	AK194656|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr11_+_97699719_97699824	0.337128	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_88826362_88826389	0.337074	HOX{A6,A7,B6,B7}.p2	BC104263|Krtap14|23927|keratin associated protein 14	BC104262|Krtap14|23927|keratin associated protein 14	AF003691|Krtap14|23927|keratin associated protein 14	D85925|Krtap14|23927|keratin associated protein 14	NM_013707|Krtap14|23927|keratin associated protein 14
mm9_v1_chr10_-_31329530_31329530	0.337073	HOX{A6,A7,B6,B7}.p2	NM_001146349|Rnf217|268291|ring finger protein 217
mm9_v1_chr18_+_63158808_63158850	0.335852	HOX{A6,A7,B6,B7}.p2	AK217399|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr11_+_82202401_82202479	0.335103	HOX{A6,A7,B6,B7}.p2	NM_023438|Tmem132e|270893|transmembrane protein 132E	BC137906|Tmem132e|270893|transmembrane protein 132E	BC145026|Tmem132e|270893|transmembrane protein 132E
mm9_v1_chr2_+_131776596_131776620	0.335075	HOX{A6,A7,B6,B7}.p2	AK043023|Prnd|26434|prion protein dublet	AK161043|Prnd|26434|prion protein dublet	DQ832281|Prnd|26434|prion protein dublet	NM_001126338|Prnd|26434|prion protein dublet	NM_023043|Prnd|26434|prion protein dublet	AF192384|Prnd|26434|prion protein dublet	AF192385|Prnd|26434|prion protein dublet	AF165166|Prnd|26434|prion protein dublet	BC025140|Prnd|26434|prion protein dublet
mm9_v1_chr5_-_122951791_122951906	0.332876	HOX{A6,A7,B6,B7}.p2	BC054531|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC054748|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AJ131821|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AJ223584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr2_-_127614580_127614637	0.332209	HOX{A6,A7,B6,B7}.p2	AF127180|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AF176210|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AJ243223|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	BC118953|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767895|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767896|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767897|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767898|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	NM_016902|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174553|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174554|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AK159627|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)
mm9_v1_chr16_+_87699143_87699302	0.331402	HOX{A6,A7,B6,B7}.p2	D86603|Bach1|12013|BTB and CNC homology 1	AK140765|Bach1|12013|BTB and CNC homology 1	AK140903|Bach1|12013|BTB and CNC homology 1	NM_007520|Bach1|12013|BTB and CNC homology 1	AK030871|Bach1|12013|BTB and CNC homology 1	AK141405|Bach1|12013|BTB and CNC homology 1	BC057894|Bach1|12013|BTB and CNC homology 1
mm9_v1_chr10_+_115738429_115738633	0.331148	HOX{A6,A7,B6,B7}.p2	AK147439|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	AK147668|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	NM_029928|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	AY077755|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	BC141006|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	BC145111|Ptprb|19263|protein tyrosine phosphatase, receptor type, B
mm9_v1_chr1_+_44608355_44608562	0.331037	HOX{A6,A7,B6,B7}.p2	BC032154|Gulp1|70676|GULP, engulfment adaptor PTB domain containing 1	AK036670|Gulp1|70676|GULP, engulfment adaptor PTB domain containing 1	NM_028450|Gulp1|70676|GULP, engulfment adaptor PTB domain containing 1	AK017798|Gulp1|70676|GULP, engulfment adaptor PTB domain containing 1	AK028490|Gulp1|70676|GULP, engulfment adaptor PTB domain containing 1
mm9_v1_chr17_-_49703586_49703636	0.330744	HOX{A6,A7,B6,B7}.p2	AK162940|Daam2|76441|dishevelled associated activator of morphogenesis 2
mm9_v1_chr17_+_74154180_74154211	0.330334	HOX{A6,A7,B6,B7}.p2	AK141265|Ehd3|57440|EH-domain containing 3	NM_020578|Ehd3|57440|EH-domain containing 3	AK128964|Ehd3|57440|EH-domain containing 3	AF155883|Ehd3|57440|EH-domain containing 3
mm9_v1_chr3_-_109946095_109946180	0.329536	HOX{A6,A7,B6,B7}.p2	AB038667|Ntng1|80883|netrin G1	AK173075|Ntng1|80883|netrin G1
mm9_v1_chr2_-_66278870_66278908	0.329042	HOX{A6,A7,B6,B7}.p2	AK046001|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	AK134744|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	NM_018733|Scn1a|20265|sodium channel, voltage-gated, type I, alpha
mm9_v1_chr5_-_143666064_143666381	0.328986	HOX{A6,A7,B6,B7}.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr11_+_79391766_79391883	0.328529	HOX{A6,A7,B6,B7}.p2	AK053047|Nf1|18015|neurofibromatosis 1
mm9_v1_chr12_+_114312268_114312351	0.328206	HOX{A6,A7,B6,B7}.p2	AK216671|Pacs2|217893|phosphofurin acidic cluster sorting protein 2
mm9_v1_chr8_-_75005707_75005831	0.32726	HOX{A6,A7,B6,B7}.p2	AK090231|Slc35e1|270066|solute carrier family 35, member E1	AK182855|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr15_+_74346835_74346839	0.327135	HOX{A6,A7,B6,B7}.p2	AK147494|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr3_-_88214554_88214644	0.326893	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_100407241_100407274	0.326679	HOX{A6,A7,B6,B7}.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr12_-_21396339_21396369	0.326548	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_11558428_11558472	0.325274	HOX{A6,A7,B6,B7}.p2	AK035490|Ing1|26356|inhibitor of growth family, member 1	AK157424|Ing1|26356|inhibitor of growth family, member 1	AF177756|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chr10_+_120834189_120834223	0.325216	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_-_73785068_73785151	0.32487	HOX{A6,A7,B6,B7}.p2	NM_008410|Itm2b|16432|integral membrane protein 2B	U76253|Itm2b|16432|integral membrane protein 2B	AK077482|Itm2b|16432|integral membrane protein 2B	BC010320|Itm2b|16432|integral membrane protein 2B	AK076139|Itm2b|16432|integral membrane protein 2B	AK152068|Itm2b|16432|integral membrane protein 2B	BC021786|Itm2b|16432|integral membrane protein 2B	AK152983|Itm2b|16432|integral membrane protein 2B	AK159619|Itm2b|16432|integral membrane protein 2B	AB030203|Itm2b|16432|integral membrane protein 2B	AK150378|Itm2b|16432|integral membrane protein 2B	AK150396|Itm2b|16432|integral membrane protein 2B	AK151714|Itm2b|16432|integral membrane protein 2B	AK151889|Itm2b|16432|integral membrane protein 2B	AK152516|Itm2b|16432|integral membrane protein 2B	AK152650|Itm2b|16432|integral membrane protein 2B	AK159378|Itm2b|16432|integral membrane protein 2B	AK160725|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr11_-_54533036_54533041	0.324502	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_147032490_147032561	0.324193	HOX{A6,A7,B6,B7}.p2	AK017576|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK029912|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK150269|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK152106|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr11_+_19824417_19824473	0.323826	HOX{A6,A7,B6,B7}.p2	AK153700|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK036430|Spred2|114716|sprouty-related, EVH1 domain containing 2	NM_033523|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK157817|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr11_+_48615164_48615222	0.323561	HOX{A6,A7,B6,B7}.p2	AK012242|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr14_-_37935305_37935311	0.32316	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_97197870_97198051	0.323141	HOX{A6,A7,B6,B7}.p2	AK185594|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK195499|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK205549|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK207967|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK212239|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK214075|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK216087|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK218146|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK220110|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK206178|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK190102|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK205025|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK005851|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr3_-_8964045_8964059	0.323036	HOX{A6,A7,B6,B7}.p2	AY048852|Tpd52|21985|tumor protein D52	NM_001025261|Tpd52|21985|tumor protein D52	NM_001025262|Tpd52|21985|tumor protein D52
mm9_v1_chr1_+_182682561_182682684	0.322921	HOX{A6,A7,B6,B7}.p2	AK018392|Acbd3|170760|acyl-Coenzyme A binding domain containing 3
mm9_v1_chr11_-_79337251_79337263	0.32198	HOX{A6,A7,B6,B7}.p2	NM_001077496|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr4_+_154932115_154932142	0.320871	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_23011403_23011543	0.320853	HOX{A6,A7,B6,B7}.p2	AK078365|Mastl|67121|microtubule associated serine/threonine kinase-like	BC103779|Mastl|67121|microtubule associated serine/threonine kinase-like	AK030140|Mastl|67121|microtubule associated serine/threonine kinase-like	NM_025979|Mastl|67121|microtubule associated serine/threonine kinase-like
mm9_v1_chr11_+_51912478_51912550	0.320713	HOX{A6,A7,B6,B7}.p2	AK195960|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	Z67745|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr8_+_12915892_12915957	0.320666	HOX{A6,A7,B6,B7}.p2	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr1_-_193399352_193399399	0.320608	HOX{A6,A7,B6,B7}.p2	BC060208|Dtl|76843|denticleless homolog (Drosophila)	AK045014|Dtl|76843|denticleless homolog (Drosophila)	AK054412|Dtl|76843|denticleless homolog (Drosophila)	AK012919|Dtl|76843|denticleless homolog (Drosophila)	AK017855|Dtl|76843|denticleless homolog (Drosophila)	AK133177|Dtl|76843|denticleless homolog (Drosophila)	AK164249|Dtl|76843|denticleless homolog (Drosophila)	AK164999|Dtl|76843|denticleless homolog (Drosophila)	AK169601|Dtl|76843|denticleless homolog (Drosophila)	AB095735|Dtl|76843|denticleless homolog (Drosophila)	AB095736|Dtl|76843|denticleless homolog (Drosophila)	AK154594|Dtl|76843|denticleless homolog (Drosophila)	AK166351|Dtl|76843|denticleless homolog (Drosophila)
mm9_v1_chr11_-_118162557_118162687	0.319546	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_40602888_40602905	0.319506	HOX{A6,A7,B6,B7}.p2	AK040680|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr10_-_24431707_24431809	0.319376	HOX{A6,A7,B6,B7}.p2	AK029600|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AF339910|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK145233|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK036952|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK088857|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK164619|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1
mm9_v1_chr6_+_124989830_124989833	0.31919	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_-_35605626_35605657	0.319143	HOX{A6,A7,B6,B7}.p2	NM_172930|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr8_+_89997055_89997060	0.318879	HOX{A6,A7,B6,B7}.p2	AK082312|C230036H16Rik|434335|RIKEN cDNA C230036H16 gene
mm9_v1_chr14_+_119379988_119380035	0.318833	HOX{A6,A7,B6,B7}.p2	AK200390|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3
mm9_v1_chr4_-_136891931_136891995	0.318789	HOX{A6,A7,B6,B7}.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr5_-_133017901_133018025	0.318704	HOX{A6,A7,B6,B7}.p2	AK085946|Auts2|319974|autism susceptibility candidate 2
mm9_v1_chr9_-_110018085_110018088	0.318289	HOX{A6,A7,B6,B7}.p2	AB047557|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_133347|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC058331|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr5_-_37087261_37087293	0.31772	HOX{A6,A7,B6,B7}.p2	AK037038|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed
mm9_v1_chr13_-_12432984_12433003	0.31689	HOX{A6,A7,B6,B7}.p2	AY036877|Actn2|11472|actinin alpha 2	AK047768|Actn2|11472|actinin alpha 2	BC089579|Actn2|11472|actinin alpha 2	NM_033268|Actn2|11472|actinin alpha 2
mm9_v1_chr10_-_116652417_116652563	0.316808	HOX{A6,A7,B6,B7}.p2	AK188062|Yeats4|64050|YEATS domain containing 4
mm9_v1_chr3_-_129525375_129525422	0.316752	HOX{A6,A7,B6,B7}.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr9_+_107199169_107199265	0.316431	HOX{A6,A7,B6,B7}.p2	D31943|Cish|12700|cytokine inducible SH2-containing protein	AK086040|Cish|12700|cytokine inducible SH2-containing protein	AK170554|Cish|12700|cytokine inducible SH2-containing protein	AK171431|Cish|12700|cytokine inducible SH2-containing protein	AK170410|Cish|12700|cytokine inducible SH2-containing protein	AK170877|Cish|12700|cytokine inducible SH2-containing protein	AK170116|Cish|12700|cytokine inducible SH2-containing protein	BC003783|Cish|12700|cytokine inducible SH2-containing protein	BC022178|Cish|12700|cytokine inducible SH2-containing protein
mm9_v1_chr4_+_24423561_24423690	0.315542	HOX{A6,A7,B6,B7}.p2	AK166072|Mms22l|212377|MMS22-like, DNA repair protein	AK164069|Mms22l|212377|MMS22-like, DNA repair protein	NM_199467|Mms22l|212377|MMS22-like, DNA repair protein	AK144799|Mms22l|212377|MMS22-like, DNA repair protein
mm9_v1_chr6_-_91757386_91757427	0.314702	HOX{A6,A7,B6,B7}.p2	NM_001159507|Grip2|243547|glutamate receptor interacting protein 2
mm9_v1_chr8_-_30329898_30330071	0.314141	HOX{A6,A7,B6,B7}.p2	BC137615|Unc5d|210801|unc-5 homolog D (C. elegans)	BC144783|Unc5d|210801|unc-5 homolog D (C. elegans)	BC144784|Unc5d|210801|unc-5 homolog D (C. elegans)	BC145695|Unc5d|210801|unc-5 homolog D (C. elegans)	FJ824810|Unc5d|210801|unc-5 homolog D (C. elegans)
mm9_v1_chr19_-_45857958_45858012	0.313938	HOX{A6,A7,B6,B7}.p2	AK129188|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr2_-_152657417_152657458	0.31293	HOX{A6,A7,B6,B7}.p2	BC089016|Bcl2l1|12048|BCL2-like 1	NM_009743|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr4_-_58083082_58083145	0.312908	HOX{A6,A7,B6,B7}.p2	AK136952|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr6_+_134932018_134932018	0.3127	HOX{A6,A7,B6,B7}.p2	NM_001109914|Apold1|381823|apolipoprotein L domain containing 1
mm9_v1_chr11_-_68635236_68635451	0.312204	HOX{A6,A7,B6,B7}.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr9_-_64585540_64585555	0.311612	HOX{A6,A7,B6,B7}.p2	AK132072|Rab11a|53869|RAB11a, member RAS oncogene family	AK132159|Rab11a|53869|RAB11a, member RAS oncogene family	BC010722|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr7_+_54102451_54102582	0.311346	HOX{A6,A7,B6,B7}.p2	NM_001136069|Ldha|16828|lactate dehydrogenase A	U13687|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr17_+_70318760_70318776	0.310691	HOX{A6,A7,B6,B7}.p2	AK033901|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr1_-_64125352_64125397	0.310674	HOX{A6,A7,B6,B7}.p2	AK086122|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK036514|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr5_-_104543106_104543114	0.310463	HOX{A6,A7,B6,B7}.p2	NM_010097|Sparcl1|13602|SPARC-like 1
mm9_v1_chr5_+_136282748_136282767	0.310112	HOX{A6,A7,B6,B7}.p2	AB041661|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr10_+_80614066_80614217	0.309987	HOX{A6,A7,B6,B7}.p2	AK018596|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr7_+_29573191_29573292	0.309787	HOX{A6,A7,B6,B7}.p2	AK200274|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)
mm9_v1_chr10_+_61155390_61155586	0.309296	HOX{A6,A7,B6,B7}.p2	AK003538|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr6_-_58974400_58974495	0.308757	HOX{A6,A7,B6,B7}.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr12_+_89961317_89961336	0.308743	HOX{A6,A7,B6,B7}.p2	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr2_+_174170886_174171016	0.308116	HOX{A6,A7,B6,B7}.p2	AK178212|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182236|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182338|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK183674|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK186374|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr13_+_55546808_55546869	0.308005	HOX{A6,A7,B6,B7}.p2	AK146119|Grk6|26385|G protein-coupled receptor kinase 6	AF040747|Grk6|26385|G protein-coupled receptor kinase 6	AF040748|Grk6|26385|G protein-coupled receptor kinase 6	AF040749|Grk6|26385|G protein-coupled receptor kinase 6	BC075719|Grk6|26385|G protein-coupled receptor kinase 6	Y15798|Grk6|26385|G protein-coupled receptor kinase 6	Y15799|Grk6|26385|G protein-coupled receptor kinase 6	Y15797|Grk6|26385|G protein-coupled receptor kinase 6	Y15800|Grk6|26385|G protein-coupled receptor kinase 6
mm9_v1_chr13_+_75977323_75977523	0.30684	HOX{A6,A7,B6,B7}.p2	NM_053108|Glrx|93692|glutaredoxin	AK013722|Glrx|93692|glutaredoxin	AK153086|Glrx|93692|glutaredoxin	AF109314|Glrx|93692|glutaredoxin	AB013137|Glrx|93692|glutaredoxin	BC012642|Glrx|93692|glutaredoxin	BC054418|Glrx|93692|glutaredoxin	AF276917|Glrx|93692|glutaredoxin
mm9_v1_chr12_+_56937357_56937396	0.306509	HOX{A6,A7,B6,B7}.p2	BC034885|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr2_+_177876710_177876721	0.305825	HOX{A6,A7,B6,B7}.p2	BC058621|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr8_+_97605076_97605133	0.30555	HOX{A6,A7,B6,B7}.p2	NM_028805|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK054173|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1
mm9_v1_chr6_+_122657506_122657800	0.305456	HOX{A6,A7,B6,B7}.p2	AY455282|Nanog|71950|Nanog homeobox	AY455285|Nanog|71950|Nanog homeobox	BC132017|Nanog|71950|Nanog homeobox	BC137873|Nanog|71950|Nanog homeobox	BC144995|Nanog|71950|Nanog homeobox	BC144996|Nanog|71950|Nanog homeobox	NM_028016|Nanog|71950|Nanog homeobox	AF507043|Nanog|71950|Nanog homeobox	AB093574|Nanog|71950|Nanog homeobox	AK010332|Nanog|71950|Nanog homeobox	AK167259|Nanog|71950|Nanog homeobox	AY278951|Nanog|71950|Nanog homeobox	AB126939|Nanog|71950|Nanog homeobox	NM_001080945|Nanogpd|634428|Nanog homeobox related gene
mm9_v1_chr10_+_40069113_40069226	0.305168	HOX{A6,A7,B6,B7}.p2	AK122421|Cdk19|78334|cyclin-dependent kinase 19	NM_001168304|Cdk19|78334|cyclin-dependent kinase 19	NM_198164|Cdk19|78334|cyclin-dependent kinase 19	AK053651|Cdk19|78334|cyclin-dependent kinase 19	BC137614|Cdk19|78334|cyclin-dependent kinase 19	BC144782|Cdk19|78334|cyclin-dependent kinase 19	BC080280|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr18_+_42671130_42671146	0.305091	HOX{A6,A7,B6,B7}.p2	NM_001039474|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr2_+_162769136_162769210	0.30455	HOX{A6,A7,B6,B7}.p2	BC116639|L3mbtl|241764|l(3)mbt-like (Drosophila)	NM_001081338|L3mbtl|241764|l(3)mbt-like (Drosophila)	AK049859|L3mbtl|241764|l(3)mbt-like (Drosophila)	AJ875399|L3mbtl|241764|l(3)mbt-like (Drosophila)	AJ875400|L3mbtl|241764|l(3)mbt-like (Drosophila)	AJ875401|L3mbtl|241764|l(3)mbt-like (Drosophila)
mm9_v1_chr5_-_149364353_149364422	0.304067	HOX{A6,A7,B6,B7}.p2	NM_011908|Ubl3|24109|ubiquitin-like 3	BC024507|Ubl3|24109|ubiquitin-like 3	BC043729|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr3_+_137004041_137004080	0.303631	HOX{A6,A7,B6,B7}.p2	NM_001163522|Emcn|59308|endomucin	NM_016885|Emcn|59308|endomucin	AK145825|Emcn|59308|endomucin	AK002616|Emcn|59308|endomucin	AK029348|Emcn|59308|endomucin	BC003706|Emcn|59308|endomucin
mm9_v1_chr1_+_34356614_34356645	0.303333	HOX{A6,A7,B6,B7}.p2	BC048929|Dst|13518|dystonin
mm9_v1_chr4_+_102432773_102432784	0.30319	HOX{A6,A7,B6,B7}.p2	AK147926|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr9_-_113562893_113563007	0.302547	HOX{A6,A7,B6,B7}.p2	AK035750|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK086540|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK157704|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr9_+_114632997_114633011	0.302476	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_13668230_13668281	0.302407	HOX{A6,A7,B6,B7}.p2	AK041044|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK160611|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	BC021899|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK049829|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK045181|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK004572|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	NM_028761|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)
mm9_v1_chr13_+_43497279_43497424	0.302026	HOX{A6,A7,B6,B7}.p2	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr16_-_87496048_87496148	0.301866	HOX{A6,A7,B6,B7}.p2	BC009007|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK168465|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK172867|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145661|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145754|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK075711|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK075880|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK159969|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK147038|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	NM_009840|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK010882|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145918|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	Z37164|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)
mm9_v1_chr14_-_32390502_32390568	0.301779	HOX{A6,A7,B6,B7}.p2	BC107386|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC107387|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK134212|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_009937|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
mm9_v1_chr1_-_166237342_166237430	0.301745	HOX{A6,A7,B6,B7}.p2	AK005489|Blzf1|66352|basic leucine zipper nuclear factor 1	AK168933|Blzf1|66352|basic leucine zipper nuclear factor 1	BC027025|Blzf1|66352|basic leucine zipper nuclear factor 1	AK171167|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr9_-_29219382_29219527	0.301443	HOX{A6,A7,B6,B7}.p2	AK158752|Ntm|235106|neurotrimin
mm9_v1_chr17_+_70911084_70911126	0.301139	HOX{A6,A7,B6,B7}.p2	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr18_+_40416615_40416659	0.300949	HOX{A6,A7,B6,B7}.p2	AK013700|2900055J20Rik|73001|RIKEN cDNA 2900055J20 gene
mm9_v1_chr9_+_122026378_122026421	0.300825	HOX{A6,A7,B6,B7}.p2	NM_001164572|Snrk|20623|SNF related kinase	NM_133741|Snrk|20623|SNF related kinase
mm9_v1_chr9_+_44448105_44448130	0.300042	HOX{A6,A7,B6,B7}.p2	AK003265|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr3_+_13471643_13471656	0.299665	HOX{A6,A7,B6,B7}.p2	NM_001163328|Ralyl|76897|RALY RNA binding protein-like	NM_178631|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr15_-_36700634_36700638	0.299447	HOX{A6,A7,B6,B7}.p2	AK003664|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr1_+_166237784_166237874	0.299119	HOX{A6,A7,B6,B7}.p2	AK144915|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_138314|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_178071|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK043515|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK085222|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK164652|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK044962|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC038021|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC049225|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr2_-_60589059_60589160	0.298992	HOX{A6,A7,B6,B7}.p2	AK011205|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr6_+_88775664_88775919	0.298813	HOX{A6,A7,B6,B7}.p2	AK195256|Mgll|23945|monoglyceride lipase	AK199521|Mgll|23945|monoglyceride lipase	AK213425|Mgll|23945|monoglyceride lipase	AK185298|Mgll|23945|monoglyceride lipase	AK186020|Mgll|23945|monoglyceride lipase	AK190741|Mgll|23945|monoglyceride lipase	AK191234|Mgll|23945|monoglyceride lipase	AK191381|Mgll|23945|monoglyceride lipase	AK193146|Mgll|23945|monoglyceride lipase	AK194428|Mgll|23945|monoglyceride lipase	AK195163|Mgll|23945|monoglyceride lipase	AK195208|Mgll|23945|monoglyceride lipase	AK197913|Mgll|23945|monoglyceride lipase	AK198715|Mgll|23945|monoglyceride lipase	AK199057|Mgll|23945|monoglyceride lipase	AK200299|Mgll|23945|monoglyceride lipase	AK202265|Mgll|23945|monoglyceride lipase	AK202325|Mgll|23945|monoglyceride lipase	AK208993|Mgll|23945|monoglyceride lipase	AK214675|Mgll|23945|monoglyceride lipase	AK136867|Mgll|23945|monoglyceride lipase
mm9_v1_chr10_+_127799210_127799343	0.298629	HOX{A6,A7,B6,B7}.p2	AK004297|Cs|12974|citrate synthase
mm9_v1_chr1_+_161453899_161453937	0.298537	HOX{A6,A7,B6,B7}.p2	AK039390|Tnr|21960|tenascin R	NM_022312|Tnr|21960|tenascin R	AJ005844|Tnr|21960|tenascin R
mm9_v1_chr19_+_12040311_12040373	0.298219	HOX{A6,A7,B6,B7}.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chr9_-_36540210_36540345	0.298132	HOX{A6,A7,B6,B7}.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr11_-_29447830_29448039	0.297839	HOX{A6,A7,B6,B7}.p2	BC002108|Rps27a|78294|ribosomal protein S27A	AK018706|Rps27a|78294|ribosomal protein S27A	NM_001033865|Rps27a|78294|ribosomal protein S27A	NM_024277|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr2_+_152106052_152106158	0.297833	HOX{A6,A7,B6,B7}.p2	AK042898|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide
mm9_v1_chr17_-_41071432_41071526	0.297748	HOX{A6,A7,B6,B7}.p2	BC018524|Cenpq|83815|centromere protein Q	AK076094|Cenpq|83815|centromere protein Q	AK011998|Cenpq|83815|centromere protein Q	AK012179|Cenpq|83815|centromere protein Q	AK020040|Cenpq|83815|centromere protein Q	NM_031863|Cenpq|83815|centromere protein Q	AK157569|Cenpq|83815|centromere protein Q
mm9_v1_chr15_-_57723937_57723989	0.296762	HOX{A6,A7,B6,B7}.p2	AK152901|Derl1|67819|Der1-like domain family, member 1	AK148018|Derl1|67819|Der1-like domain family, member 1	AK152197|Derl1|67819|Der1-like domain family, member 1	AK043420|Derl1|67819|Der1-like domain family, member 1	NM_024207|Derl1|67819|Der1-like domain family, member 1	AK007435|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr11_+_87569075_87569079	0.296695	HOX{A6,A7,B6,B7}.p2	AK020764|A430104N18Rik|78591|RIKEN cDNA A430104N18 gene
mm9_v1_chr11_+_54683866_54683920	0.296425	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_43621580_43621645	0.296065	HOX{A6,A7,B6,B7}.p2	AK088029|Rtn4ip1|170728|reticulon 4 interacting protein 1	NM_130892|Rtn4ip1|170728|reticulon 4 interacting protein 1	AK050324|Rtn4ip1|170728|reticulon 4 interacting protein 1	AK085858|Rtn4ip1|170728|reticulon 4 interacting protein 1	BC024116|Rtn4ip1|170728|reticulon 4 interacting protein 1
mm9_v1_chr6_-_83391623_83391671	0.296035	HOX{A6,A7,B6,B7}.p2	AK044758|Tet3|194388|tet oncogene family member 3	AK046543|Tet3|194388|tet oncogene family member 3	AK046552|Tet3|194388|tet oncogene family member 3	AK046553|Tet3|194388|tet oncogene family member 3	NM_183138|Tet3|194388|tet oncogene family member 3
mm9_v1_chr2_-_32208737_32208880	0.295451	HOX{A6,A7,B6,B7}.p2	L31395|Dnm1|13429|dynamin 1	BC058623|Dnm1|13429|dynamin 1	L31397|Dnm1|13429|dynamin 1	AK220483|Dnm1|13429|dynamin 1	AK144142|Dnm1|13429|dynamin 1	BC034679|Dnm1|13429|dynamin 1	AK011651|Dnm1|13429|dynamin 1	NM_010065|Dnm1|13429|dynamin 1
mm9_v1_chr18_+_56899574_56899584	0.295062	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_67085155_67085378	0.294748	HOX{A6,A7,B6,B7}.p2	AK182687|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AK186065|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AK210427|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1
mm9_v1_chr9_-_40965548_40965649	0.294306	HOX{A6,A7,B6,B7}.p2	BC053436|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AB075602|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AK172288|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AK133948|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	AK035764|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B	NM_176860|Ubash3b|72828|ubiquitin associated and SH3 domain containing, B
mm9_v1_chr19_+_23216035_23216244	0.294151	HOX{A6,A7,B6,B7}.p2	CT010185|Klf9|16601|Kruppel-like factor 9	Y14296|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr4_+_102262447_102262471	0.294047	HOX{A6,A7,B6,B7}.p2	AK051102|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177981|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC071259|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr16_-_4879787_4879850	0.294044	HOX{A6,A7,B6,B7}.p2	BC013706|Fam100a|207740|family with sequence similarity 100, member A	BC064081|Fam100a|207740|family with sequence similarity 100, member A	BC056472|Fam100a|207740|family with sequence similarity 100, member A	AK005316|Fam100a|207740|family with sequence similarity 100, member A	NM_145359|Fam100a|207740|family with sequence similarity 100, member A
mm9_v1_chrX_-_20527674_20527737	0.293187	HOX{A6,A7,B6,B7}.p2	BC054474|Elk1|13712|ELK1, member of ETS oncogene family	AK132354|Elk1|13712|ELK1, member of ETS oncogene family	NM_007922|Elk1|13712|ELK1, member of ETS oncogene family	AK082260|Elk1|13712|ELK1, member of ETS oncogene family
mm9_v1_chr1_+_45401303_45401332	0.292883	HOX{A6,A7,B6,B7}.p2	AK159868|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chrX_+_91881407_91881417	0.292342	HOX{A6,A7,B6,B7}.p2	NM_008179|Gspt2|14853|G1 to S phase transition 2	AK050859|Gspt2|14853|G1 to S phase transition 2	AK019241|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr5_-_122921160_122921263	0.292142	HOX{A6,A7,B6,B7}.p2	AK210291|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr18_+_67365012_67365154	0.291717	HOX{A6,A7,B6,B7}.p2	NM_024190|Chmp1b|67064|chromatin modifying protein 1B	AK151071|Chmp1b|67064|chromatin modifying protein 1B	AK014091|Chmp1b|67064|chromatin modifying protein 1B	AK012996|Chmp1b|67064|chromatin modifying protein 1B	AK167614|Chmp1b|67064|chromatin modifying protein 1B	BC002229|Chmp1b|67064|chromatin modifying protein 1B	BC034442|Chmp1b|67064|chromatin modifying protein 1B	CT010307|Chmp1b|67064|chromatin modifying protein 1B
mm9_v1_chr2_+_30450563_30450567	0.291561	HOX{A6,A7,B6,B7}.p2	AK020589|Cstad|78617|CSA-conditional, T cell activation-dependent protein	AK047294|Cstad|78617|CSA-conditional, T cell activation-dependent protein	NM_030137|Cstad|78617|CSA-conditional, T cell activation-dependent protein	BC117017|Cstad|78617|CSA-conditional, T cell activation-dependent protein	BC117019|Cstad|78617|CSA-conditional, T cell activation-dependent protein
mm9_v1_chr9_-_72833159_72833188	0.291466	HOX{A6,A7,B6,B7}.p2	BC099568|Gm5918|546143|predicted gene 5918	BC048630|Gm5918|546143|predicted gene 5918	NM_001198789|Gm5918|546143|predicted gene 5918	AK145722|Gm5918|546143|predicted gene 5918
mm9_v1_chr13_+_40955500_40955723	0.290888	HOX{A6,A7,B6,B7}.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr19_+_6371205_6371279	0.290776	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_85642829_85642930	0.290247	HOX{A6,A7,B6,B7}.p2	BC137798|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK030895|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	BC060722|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK136872|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK037129|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK050176|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr1_-_20810238_20810392	0.289894	HOX{A6,A7,B6,B7}.p2	X62154|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	BC031700|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	NM_008563|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK146497|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK147065|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	BC020400|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK148006|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK088142|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK133850|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK145563|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chr17_+_34729498_34729688	0.289731	HOX{A6,A7,B6,B7}.p2	CT010391|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr11_+_102291759_102291826	0.28934	HOX{A6,A7,B6,B7}.p2	AK018744|Grn|14824|granulin	AK013678|Grn|14824|granulin	AK147932|Grn|14824|granulin	AK149570|Grn|14824|granulin	AK150205|Grn|14824|granulin	AK150746|Grn|14824|granulin	AK150881|Grn|14824|granulin	AK151007|Grn|14824|granulin	AK151162|Grn|14824|granulin	AK151343|Grn|14824|granulin	AK151713|Grn|14824|granulin	AK152048|Grn|14824|granulin	AK152087|Grn|14824|granulin	AK152705|Grn|14824|granulin	AK152765|Grn|14824|granulin	AK153269|Grn|14824|granulin	AK153289|Grn|14824|granulin	AK153418|Grn|14824|granulin	AK153470|Grn|14824|granulin	AK154492|Grn|14824|granulin	AK160033|Grn|14824|granulin	AK159809|Grn|14824|granulin	AK150125|Grn|14824|granulin	AK151756|Grn|14824|granulin	AK150717|Grn|14824|granulin	AK159557|Grn|14824|granulin
mm9_v1_chr8_+_108703203_108703313	0.28928	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_100800603_100800824	0.289264	HOX{A6,A7,B6,B7}.p2	U06922|Stat3|20848|signal transducer and activator of transcription 3	AK145486|Stat3|20848|signal transducer and activator of transcription 3	U08378|Stat3|20848|signal transducer and activator of transcription 3	BC003806|Stat3|20848|signal transducer and activator of transcription 3	U30709|Stat3|20848|signal transducer and activator of transcription 3	BC019168|Stat3|20848|signal transducer and activator of transcription 3	AK153472|Stat3|20848|signal transducer and activator of transcription 3	AK153005|Stat3|20848|signal transducer and activator of transcription 3	L29278|Stat3|20848|signal transducer and activator of transcription 3	NM_011486|Stat3|20848|signal transducer and activator of transcription 3	NM_213659|Stat3|20848|signal transducer and activator of transcription 3	NM_213660|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr17_+_71368860_71368930	0.288968	HOX{A6,A7,B6,B7}.p2	AJ012072|Myom1|17929|myomesin 1	NM_001083934|Myom1|17929|myomesin 1	NM_010867|Myom1|17929|myomesin 1	Z22866|Myom1|17929|myomesin 1	AK052539|Myom1|17929|myomesin 1
mm9_v1_chr7_+_26161818_26161841	0.288896	HOX{A6,A7,B6,B7}.p2	AK076372|4732471J01Rik|654804|RIKEN cDNA 4732471J01 gene	AK043644|4732471J01Rik|654804|RIKEN cDNA 4732471J01 gene	AK078204|4732471J01Rik|654804|RIKEN cDNA 4732471J01 gene
mm9_v1_chr3_-_88307198_88307245	0.288841	HOX{A6,A7,B6,B7}.p2	X14170|Lmna|16905|lamin A	AK167858|Lmna|16905|lamin A	AK004619|Lmna|16905|lamin A	AK147150|Lmna|16905|lamin A	AK149998|Lmna|16905|lamin A	AK150391|Lmna|16905|lamin A	AK150501|Lmna|16905|lamin A	AK150624|Lmna|16905|lamin A	AK152539|Lmna|16905|lamin A	AK152646|Lmna|16905|lamin A	AK152846|Lmna|16905|lamin A
mm9_v1_chr9_-_70269246_70269297	0.288669	HOX{A6,A7,B6,B7}.p2	CT010286|Ccnb2|12442|cyclin B2	BC008247|Ccnb2|12442|cyclin B2
mm9_v1_chr10_+_80642285_80642527	0.288634	HOX{A6,A7,B6,B7}.p2	AK197735|Eef2|13629|eukaryotic translation elongation factor 2	AK181350|Eef2|13629|eukaryotic translation elongation factor 2	AK179706|Eef2|13629|eukaryotic translation elongation factor 2	AK180098|Eef2|13629|eukaryotic translation elongation factor 2	AK187232|Eef2|13629|eukaryotic translation elongation factor 2	AK187739|Eef2|13629|eukaryotic translation elongation factor 2	AK188630|Eef2|13629|eukaryotic translation elongation factor 2	AK192640|Eef2|13629|eukaryotic translation elongation factor 2	AK196185|Eef2|13629|eukaryotic translation elongation factor 2	AK198959|Eef2|13629|eukaryotic translation elongation factor 2	AK199367|Eef2|13629|eukaryotic translation elongation factor 2	AK204209|Eef2|13629|eukaryotic translation elongation factor 2	AK205796|Eef2|13629|eukaryotic translation elongation factor 2	AK212960|Eef2|13629|eukaryotic translation elongation factor 2	AK215832|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr4_-_43013064_43013178	0.288552	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_84339151_84339188	0.2881	HOX{A6,A7,B6,B7}.p2	AK018772|1500016L03Rik|78365|RIKEN cDNA 1500016L03 gene
mm9_v1_chr11_-_118902219_118902253	0.287983	HOX{A6,A7,B6,B7}.p2	AF180370|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)	NM_013926|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)
mm9_v1_chr4_+_98213324_98213424	0.287853	HOX{A6,A7,B6,B7}.p2	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr11_-_104411728_104411933	0.287453	HOX{A6,A7,B6,B7}.p2	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr3_-_146184337_146184397	0.287263	HOX{A6,A7,B6,B7}.p2	BC056165|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171035|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	BC089369|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK008988|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK010079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027332|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027371|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK162073|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)
mm9_v1_chr19_-_40588297_40588344	0.286442	HOX{A6,A7,B6,B7}.p2	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr6_+_113328105_113328186	0.286378	HOX{A6,A7,B6,B7}.p2	NM_001170485|Arpc4|68089|actin related protein 2/3 complex, subunit 4	NM_001170486|Arpc4|68089|actin related protein 2/3 complex, subunit 4	NM_026552|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK017993|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK030840|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK039215|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK076248|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK133626|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK159410|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK136082|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK018069|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK150690|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK153380|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AJ278129|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK077325|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK166440|Arpc4|68089|actin related protein 2/3 complex, subunit 4
mm9_v1_chr12_-_119474010_119474093	0.285954	HOX{A6,A7,B6,B7}.p2	AK017738|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr18_+_37644674_37644812	0.285913	HOX{A6,A7,B6,B7}.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr6_-_122692407_122692520	0.285489	HOX{A6,A7,B6,B7}.p2	CT010354|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	M75135|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	X61093|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC050095|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK155997|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC034122|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC058811|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr3_+_89883564_89883639	0.285171	HOX{A6,A7,B6,B7}.p2	AK169821|Tpm3|59069|tropomyosin 3, gamma	AK167534|Tpm3|59069|tropomyosin 3, gamma	AK145238|Tpm3|59069|tropomyosin 3, gamma	AK145243|Tpm3|59069|tropomyosin 3, gamma	AK145804|Tpm3|59069|tropomyosin 3, gamma	AK151500|Tpm3|59069|tropomyosin 3, gamma	AK151571|Tpm3|59069|tropomyosin 3, gamma	AK151602|Tpm3|59069|tropomyosin 3, gamma	AK164086|Tpm3|59069|tropomyosin 3, gamma	AK165428|Tpm3|59069|tropomyosin 3, gamma	AK167581|Tpm3|59069|tropomyosin 3, gamma	X53753|Tpm3|59069|tropomyosin 3, gamma	AK088111|Tpm3|59069|tropomyosin 3, gamma	AK088902|Tpm3|59069|tropomyosin 3, gamma	AK151578|Tpm3|59069|tropomyosin 3, gamma	AK151991|Tpm3|59069|tropomyosin 3, gamma	AK152260|Tpm3|59069|tropomyosin 3, gamma	AK050665|Tpm3|59069|tropomyosin 3, gamma	AK166836|Tpm3|59069|tropomyosin 3, gamma	AK167268|Tpm3|59069|tropomyosin 3, gamma	AK169245|Tpm3|59069|tropomyosin 3, gamma	BC092045|Tpm3|59069|tropomyosin 3, gamma	AK146349|Tpm3|59069|tropomyosin 3, gamma	AK153031|Tpm3|59069|tropomyosin 3, gamma	AK169102|Tpm3|59069|tropomyosin 3, gamma	AK151595|Tpm3|59069|tropomyosin 3, gamma	AK152659|Tpm3|59069|tropomyosin 3, gamma	AK168843|Tpm3|59069|tropomyosin 3, gamma
mm9_v1_chr3_+_102800607_102800650	0.28494	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_86509102_86509123	0.28485	HOX{A6,A7,B6,B7}.p2	AK018633|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr4_-_41720928_41721082	0.284031	HOX{A6,A7,B6,B7}.p2	BC099574|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001164045|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001048179|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001164044|Ccl27a|20301|chemokine (C-C motif) ligand 27A
mm9_v1_chr6_+_124254668_124254724	0.283773	HOX{A6,A7,B6,B7}.p2	NM_001170395|Cd163|93671|CD163 antigen	NM_053094|Cd163|93671|CD163 antigen	AF274883|Cd163|93671|CD163 antigen	BC144848|Cd163|93671|CD163 antigen	BC145793|Cd163|93671|CD163 antigen	DQ058616|Cd163|93671|CD163 antigen	DQ058617|Cd163|93671|CD163 antigen
mm9_v1_chr11_+_20443315_20443422	0.28341	HOX{A6,A7,B6,B7}.p2	AB041541|Sertad2|58172|SERTA domain containing 2	BC014726|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr3_+_95086814_95087156	0.283352	HOX{A6,A7,B6,B7}.p2	NM_133858|Fam63a|75007|family with sequence similarity 63, member A	NM_199475|Fam63a|75007|family with sequence similarity 63, member A	AK169673|Fam63a|75007|family with sequence similarity 63, member A	AK036838|Fam63a|75007|family with sequence similarity 63, member A	BC094388|Fam63a|75007|family with sequence similarity 63, member A	AK087859|Fam63a|75007|family with sequence similarity 63, member A	AK162551|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr16_-_98169926_98169967	0.283132	HOX{A6,A7,B6,B7}.p2	AK017406|Zfp295|114565|zinc finger protein 295	AK084920|Zfp295|114565|zinc finger protein 295
mm9_v1_chr19_+_39005433_39005482	0.282758	HOX{A6,A7,B6,B7}.p2	BC090671|Hells|15201|helicase, lymphoid specific	AK013266|Hells|15201|helicase, lymphoid specific	U25691|Hells|15201|helicase, lymphoid specific	AK147126|Hells|15201|helicase, lymphoid specific	AF155210|Hells|15201|helicase, lymphoid specific	NM_008234|Hells|15201|helicase, lymphoid specific	AK166636|Hells|15201|helicase, lymphoid specific	BC100394|Hells|15201|helicase, lymphoid specific
mm9_v1_chr9_-_119734573_119734593	0.282758	HOX{A6,A7,B6,B7}.p2	AF118044|Scn11a|24046|sodium channel, voltage-gated, type XI, alpha	NM_011887|Scn11a|24046|sodium channel, voltage-gated, type XI, alpha
mm9_v1_chr16_+_62854129_62854197	0.282407	HOX{A6,A7,B6,B7}.p2	AK163032|Pros1|19128|protein S (alpha)	AK145501|Pros1|19128|protein S (alpha)	NM_011173|Pros1|19128|protein S (alpha)	Z25469|Pros1|19128|protein S (alpha)	BC128316|Pros1|19128|protein S (alpha)
mm9_v1_chr12_+_56499902_56499913	0.281044	HOX{A6,A7,B6,B7}.p2	AF060087|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr11_+_104189978_104190032	0.280946	HOX{A6,A7,B6,B7}.p2	AK135147|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr8_+_23868194_23868239	0.280846	HOX{A6,A7,B6,B7}.p2	AK053476|Plat|18791|plasminogen activator, tissue	NM_008872|Plat|18791|plasminogen activator, tissue	BC011256|Plat|18791|plasminogen activator, tissue	AK135857|Plat|18791|plasminogen activator, tissue	AK135965|Plat|18791|plasminogen activator, tissue	AK141665|Plat|18791|plasminogen activator, tissue	AK159620|Plat|18791|plasminogen activator, tissue	AK166639|Plat|18791|plasminogen activator, tissue	BC061508|Plat|18791|plasminogen activator, tissue	BC057967|Plat|18791|plasminogen activator, tissue	J03520|Plat|18791|plasminogen activator, tissue
mm9_v1_chr7_+_116084192_116084237	0.280543	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_10395401_10395557	0.280515	HOX{A6,A7,B6,B7}.p2	AK014352|Tekt5|70426|tektin 5	BC115969|Tekt5|70426|tektin 5	NM_001099275|Tekt5|70426|tektin 5	GQ292766|Tekt5|70426|tektin 5
mm9_v1_chr11_+_84684395_84684447	0.280282	HOX{A6,A7,B6,B7}.p2	AK143696|Gm10374|100191074|predicted gene 10374
mm9_v1_chr1_-_22812829_22812843	0.279511	HOX{A6,A7,B6,B7}.p2	AK090169|Rims1|116837|regulating synaptic membrane exocytosis 1
mm9_v1_chr12_-_82434150_82434166	0.279184	HOX{A6,A7,B6,B7}.p2	AK139260|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AF453257|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AK044636|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_001167920|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_080440|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3
mm9_v1_chr12_-_88225714_88225776	0.278545	HOX{A6,A7,B6,B7}.p2	AK155373|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK171043|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK160059|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK140441|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK082791|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AF525300|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK084782|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK173282|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	NM_145836|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK032622|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK032366|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene
mm9_v1_chr9_+_65974417_65974646	0.278416	HOX{A6,A7,B6,B7}.p2	AK077700|Fam96a|68250|family with sequence similarity 96, member A	NM_026635|Fam96a|68250|family with sequence similarity 96, member A	AK002690|Fam96a|68250|family with sequence similarity 96, member A	BC005745|Fam96a|68250|family with sequence similarity 96, member A	AK003870|Fam96a|68250|family with sequence similarity 96, member A	AK170445|Fam96a|68250|family with sequence similarity 96, member A	AK197739|Fam96a|68250|family with sequence similarity 96, member A
mm9_v1_chr14_+_120674913_120674920	0.278371	HOX{A6,A7,B6,B7}.p2	AK220470|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_+_50561092_50561116	0.278031	HOX{A6,A7,B6,B7}.p2	AK146556|Cryab|12955|crystallin, alpha B
mm9_v1_chr1_+_174437040_174437140	0.27793	HOX{A6,A7,B6,B7}.p2	AK019231|Tagln2|21346|transgelin 2
mm9_v1_chr14_+_59820064_59820146	0.277778	HOX{A6,A7,B6,B7}.p2	NM_027764|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK089923|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK088299|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	BC067005|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK033501|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr6_-_85452851_85452987	0.276521	HOX{A6,A7,B6,B7}.p2	AK147681|Fbxo41|330369|F-box protein 41	AK147230|Fbxo41|330369|F-box protein 41	NM_001001160|Fbxo41|330369|F-box protein 41	BC070445|Fbxo41|330369|F-box protein 41
mm9_v1_chr12_+_70298163_70298251	0.276071	HOX{A6,A7,B6,B7}.p2	AK161156|9330151L19Rik|414085|RIKEN cDNA 9330151L19 gene	AK154174|9330151L19Rik|414085|RIKEN cDNA 9330151L19 gene	AK034052|9330151L19Rik|414085|RIKEN cDNA 9330151L19 gene
mm9_v1_chr18_+_34784589_34784686	0.275824	HOX{A6,A7,B6,B7}.p2	NM_009004|Kif20a|19348|kinesin family member 20A	AK083412|Kif20a|19348|kinesin family member 20A	AK051995|Kif20a|19348|kinesin family member 20A	AK084732|Kif20a|19348|kinesin family member 20A	AK142764|Kif20a|19348|kinesin family member 20A	AK083697|Kif20a|19348|kinesin family member 20A	AK051201|Kif20a|19348|kinesin family member 20A	AK053280|Kif20a|19348|kinesin family member 20A	AK144844|Kif20a|19348|kinesin family member 20A	BC060608|Kif20a|19348|kinesin family member 20A	NM_001166406|Kif20a|19348|kinesin family member 20A
mm9_v1_chr9_+_120860017_120860081	0.275806	HOX{A6,A7,B6,B7}.p2	AK135743|Ctnnb1|12387|catenin (cadherin associated protein), beta 1	BC043078|Ctnnb1|12387|catenin (cadherin associated protein), beta 1
mm9_v1_chr7_-_111795818_111795818	0.275657	HOX{A6,A7,B6,B7}.p2	AK033992|Olfr658|259051|olfactory receptor 658	NM_147049|Olfr658|259051|olfactory receptor 658
mm9_v1_chr7_+_87406066_87406184	0.275413	HOX{A6,A7,B6,B7}.p2	NM_031375|Ngrn|83485|neugrin, neurite outgrowth associated	AK083330|Ngrn|83485|neugrin, neurite outgrowth associated	AK144756|Ngrn|83485|neugrin, neurite outgrowth associated	BC004034|Ngrn|83485|neugrin, neurite outgrowth associated	AK146059|Ngrn|83485|neugrin, neurite outgrowth associated	AB047544|Ngrn|83485|neugrin, neurite outgrowth associated
mm9_v1_chr15_+_81641869_81641976	0.27538	HOX{A6,A7,B6,B7}.p2	AK145125|Tef|21685|thyrotroph embryonic factor	AK154472|Tef|21685|thyrotroph embryonic factor	BC036982|Tef|21685|thyrotroph embryonic factor	AF194420|Tef|21685|thyrotroph embryonic factor	AK147965|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr5_-_114292548_114292630	0.275001	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_34011567_34011625	0.274565	HOX{A6,A7,B6,B7}.p2	BC075644|Cnr1|12801|cannabinoid receptor 1 (brain)	BC070447|Cnr1|12801|cannabinoid receptor 1 (brain)	NM_007726|Cnr1|12801|cannabinoid receptor 1 (brain)	AY522554|Cnr1|12801|cannabinoid receptor 1 (brain)
mm9_v1_chr4_-_118951578_118951709	0.274559	HOX{A6,A7,B6,B7}.p2	AK213628|Ybx1|22608|Y box protein 1	AK181881|Ybx1|22608|Y box protein 1	AK197905|Ybx1|22608|Y box protein 1
mm9_v1_chr4_+_102242664_102242699	0.27434	HOX{A6,A7,B6,B7}.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr17_-_37088436_37088450	0.274051	HOX{A6,A7,B6,B7}.p2	EF528576|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr9_-_108363229_108363406	0.273943	HOX{A6,A7,B6,B7}.p2	AK157991|Klhdc8b|78267|kelch domain containing 8B	AK087143|Klhdc8b|78267|kelch domain containing 8B	AK154428|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr18_+_37179802_37179999	0.273855	HOX{A6,A7,B6,B7}.p2	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr5_-_28793627_28793640	0.272931	HOX{A6,A7,B6,B7}.p2	BC063087|Shh|20423|sonic hedgehog	AK077688|Shh|20423|sonic hedgehog	NM_009170|Shh|20423|sonic hedgehog
mm9_v1_chrX_-_35793335_35793510	0.271468	HOX{A6,A7,B6,B7}.p2	AK184164|Lamp2|16784|lysosomal-associated membrane protein 2	AK217258|Lamp2|16784|lysosomal-associated membrane protein 2	AK128946|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr19_+_43856793_43856893	0.27044	HOX{A6,A7,B6,B7}.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr2_+_118489457_118489505	0.269555	HOX{A6,A7,B6,B7}.p2	BC059912|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr13_-_54561296_54561396	0.268284	HOX{A6,A7,B6,B7}.p2	AK216441|Thoc3|73666|THO complex 3
mm9_v1_chr17_+_74888823_74888973	0.26675	HOX{A6,A7,B6,B7}.p2	AK166347|Yipf4|67864|Yip1 domain family, member 4	AK009618|Yipf4|67864|Yip1 domain family, member 4	AK083301|Yipf4|67864|Yip1 domain family, member 4	NM_026417|Yipf4|67864|Yip1 domain family, member 4	AK017721|Yipf4|67864|Yip1 domain family, member 4	AK017722|Yipf4|67864|Yip1 domain family, member 4	AK159227|Yipf4|67864|Yip1 domain family, member 4	BC003936|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr15_+_100592177_100592343	0.266538	HOX{A6,A7,B6,B7}.p2	AK034237|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	NM_021530|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK083945|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK050563|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK039404|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	BC030388|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AF224508|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK173014|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8
mm9_v1_chr5_-_44152043_44152071	0.266435	HOX{A6,A7,B6,B7}.p2	AK210775|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr12_+_75385267_75385319	0.266268	HOX{A6,A7,B6,B7}.p2	AK007020|1700086L19Rik|74284|RIKEN cDNA 1700086L19 gene
mm9_v1_chr19_+_8913817_8913862	0.26527	HOX{A6,A7,B6,B7}.p2	AK158901|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	NM_008144|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	BC060048|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr1_+_64579358_64579513	0.264379	HOX{A6,A7,B6,B7}.p2	NM_001037726|Creb1|12912|cAMP responsive element binding protein 1	NM_009952|Creb1|12912|cAMP responsive element binding protein 1	NM_133828|Creb1|12912|cAMP responsive element binding protein 1	AK079223|Creb1|12912|cAMP responsive element binding protein 1	X92497|Creb1|12912|cAMP responsive element binding protein 1	AK042595|Creb1|12912|cAMP responsive element binding protein 1	BC021649|Creb1|12912|cAMP responsive element binding protein 1	M95106|Creb1|12912|cAMP responsive element binding protein 1	AF448507|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr5_-_109012019_109012139	0.264001	HOX{A6,A7,B6,B7}.p2	BC003958|Gak|231580|cyclin G associated kinase
mm9_v1_chr7_+_52471161_52471287	0.26397	HOX{A6,A7,B6,B7}.p2	AK144857|Tead2|21677|TEA domain family member 2	AK146595|Tead2|21677|TEA domain family member 2	AK132009|Tead2|21677|TEA domain family member 2	Y10026|Tead2|21677|TEA domain family member 2	AK137064|Tead2|21677|TEA domain family member 2	AK143155|Tead2|21677|TEA domain family member 2
mm9_v1_chr4_-_58219368_58219467	0.263177	HOX{A6,A7,B6,B7}.p2	AK052699|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AF206329|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_022814|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr9_+_31088156_31088173	0.262765	HOX{A6,A7,B6,B7}.p2	BC064128|Prdm10|382066|PR domain containing 10
mm9_v1_chr10_+_127927057_127927088	0.26269	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_50911075_50911243	0.262235	HOX{A6,A7,B6,B7}.p2	NM_028375|Cxx1c|72865|CAAX box 1 homolog C (human)	AK013603|Cxx1c|72865|CAAX box 1 homolog C (human)	BC031701|Cxx1c|72865|CAAX box 1 homolog C (human)
mm9_v1_chr9_+_50561121_50561170	0.261802	HOX{A6,A7,B6,B7}.p2	BC010768|Cryab|12955|crystallin, alpha B
mm9_v1_chr12_-_119539909_119539930	0.261242	HOX{A6,A7,B6,B7}.p2	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr5_-_92776160_92776261	0.260792	HOX{A6,A7,B6,B7}.p2	AK152838|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr6_-_122692526_122692557	0.260557	HOX{A6,A7,B6,B7}.p2	AK164286|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK028041|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK045328|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK147258|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr13_+_58909254_58909275	0.260412	HOX{A6,A7,B6,B7}.p2	AK147391|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr17_+_30272123_30272409	0.2595	HOX{A6,A7,B6,B7}.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr18_-_52689185_52689268	0.258918	HOX{A6,A7,B6,B7}.p2	AK166279|Lox|16948|lysyl oxidase	AK159682|Lox|16948|lysyl oxidase	AK159368|Lox|16948|lysyl oxidase	M65142|Lox|16948|lysyl oxidase	AK159796|Lox|16948|lysyl oxidase	AK160096|Lox|16948|lysyl oxidase	AK159241|Lox|16948|lysyl oxidase
mm9_v1_chr19_-_46387052_46387173	0.25866	HOX{A6,A7,B6,B7}.p2	BC069847|Psd|73728|pleckstrin and Sec7 domain containing
mm9_v1_chr6_-_53018566_53018625	0.258531	HOX{A6,A7,B6,B7}.p2	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr12_-_32017267_32017279	0.257858	HOX{A6,A7,B6,B7}.p2	AK209175|Dld|13382|dihydrolipoamide dehydrogenase
mm9_v1_chr9_+_85735986_85736016	0.25746	HOX{A6,A7,B6,B7}.p2	AK165597|Tpbg|21983|trophoblast glycoprotein	NM_011627|Tpbg|21983|trophoblast glycoprotein	AK051162|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chrX_-_131285919_131285957	0.257361	HOX{A6,A7,B6,B7}.p2	BC027264|Armcx6|278097|armadillo repeat containing, X-linked 6	AK148507|Armcx6|278097|armadillo repeat containing, X-linked 6	AK160766|Armcx6|278097|armadillo repeat containing, X-linked 6	NM_001007578|Armcx6|278097|armadillo repeat containing, X-linked 6
mm9_v1_chrX_+_20271802_20271845	0.256814	HOX{A6,A7,B6,B7}.p2	AK214881|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr18_+_35750071_35750097	0.256628	HOX{A6,A7,B6,B7}.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr16_+_94906703_94906712	0.256332	HOX{A6,A7,B6,B7}.p2	BC048837|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr1_+_160292470_160292548	0.256214	HOX{A6,A7,B6,B7}.p2	AK164117|Astn1|11899|astrotactin 1	NM_007495|Astn1|11899|astrotactin 1	BC094666|Astn1|11899|astrotactin 1
mm9_v1_chr10_+_127522528_127522615	0.255166	HOX{A6,A7,B6,B7}.p2	AK186165|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr11_+_98725073_98725122	0.255013	HOX{A6,A7,B6,B7}.p2	BC057854|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr9_+_44143931_44144022	0.254287	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_119619761_119619897	0.253841	HOX{A6,A7,B6,B7}.p2	AF294899|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	AJ278064|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	NM_001163028|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	NM_021486|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	AK146472|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	BC125328|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	BC125330|Bcmo1|63857|beta-carotene 15,15'-monooxygenase	BC145036|Bcmo1|63857|beta-carotene 15,15'-monooxygenase
mm9_v1_chr15_-_96529998_96530181	0.253005	HOX{A6,A7,B6,B7}.p2	BC041108|Slc38a2|67760|solute carrier family 38, member 2	BC027259|Slc38a2|67760|solute carrier family 38, member 2	AK129342|Slc38a2|67760|solute carrier family 38, member 2	BC048178|Slc38a2|67760|solute carrier family 38, member 2	NM_175121|Slc38a2|67760|solute carrier family 38, member 2	AK017145|Slc38a2|67760|solute carrier family 38, member 2	AK030917|Slc38a2|67760|solute carrier family 38, member 2	AK031615|Slc38a2|67760|solute carrier family 38, member 2	AK047403|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr8_-_24301206_24301672	0.25278	HOX{A6,A7,B6,B7}.p2	AK178773|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AK182757|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AK204634|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AY489184|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AK188390|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	BC031767|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)
mm9_v1_chr19_+_9026569_9026592	0.252439	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_54711492_54711604	0.252138	HOX{A6,A7,B6,B7}.p2	NM_022655|Ireb2|64602|iron responsive element binding protein 2	BC044665|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr3_+_89195758_89195785	0.251553	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_44943967_44944033	0.25153	HOX{A6,A7,B6,B7}.p2	AK013088|Zcchc7|319885|zinc finger, CCHC domain containing 7
mm9_v1_chr6_-_129401762_129402017	0.251522	HOX{A6,A7,B6,B7}.p2	AK049608|Clec1a|243653|C-type lectin domain family 1, member a	AK031121|Clec1a|243653|C-type lectin domain family 1, member a	BC052840|Clec1a|243653|C-type lectin domain family 1, member a	AK036846|Clec1a|243653|C-type lectin domain family 1, member a	AK165920|Clec1a|243653|C-type lectin domain family 1, member a	NM_175526|Clec1a|243653|C-type lectin domain family 1, member a
mm9_v1_chr5_+_58110329_58110351	0.250728	HOX{A6,A7,B6,B7}.p2	AK159991|Pcdh7|54216|protocadherin 7
mm9_v1_chr12_+_73543228_73543345	0.250528	HOX{A6,A7,B6,B7}.p2	AK082549|Lrrc9|78257|leucine rich repeat containing 9	AK031279|Lrrc9|78257|leucine rich repeat containing 9	NM_001142729|Lrrc9|78257|leucine rich repeat containing 9	AK039037|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr6_+_115084919_115085009	0.250492	HOX{A6,A7,B6,B7}.p2	AF096867|Syn2|20965|synapsin II	NM_001111015|Syn2|20965|synapsin II	NM_013681|Syn2|20965|synapsin II	BC053427|Syn2|20965|synapsin II
mm9_v1_chr8_+_96561180_96561211	0.25028	HOX{A6,A7,B6,B7}.p2	AK122532|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK164189|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr6_-_113327732_113327755	0.249812	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_145454821_145454855	0.24978	HOX{A6,A7,B6,B7}.p2	AK029710|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chrX_+_38754568_38754592	0.249454	HOX{A6,A7,B6,B7}.p2	AK138615|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr9_+_70526985_70526997	0.248322	HOX{A6,A7,B6,B7}.p2	AF011379|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr2_+_120802698_120802797	0.248057	HOX{A6,A7,B6,B7}.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr4_+_126700088_126700202	0.247884	HOX{A6,A7,B6,B7}.p2	AK211570|Sfpq|71514|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm9_v1_chr5_-_91069499_91069680	0.247598	HOX{A6,A7,B6,B7}.p2	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr16_-_31314534_31314685	0.247517	HOX{A6,A7,B6,B7}.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr10_-_114821398_114821490	0.247091	HOX{A6,A7,B6,B7}.p2	BC027502|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK051198|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK009162|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK018577|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK081303|Thap2|66816|THAP domain containing, apoptosis associated protein 2	NM_025780|Thap2|66816|THAP domain containing, apoptosis associated protein 2
mm9_v1_chr13_+_21845991_21845991	0.247087	HOX{A6,A7,B6,B7}.p2	NM_178201|Hist1h2bn|319187|histone cluster 1, H2bn
mm9_v1_chr18_+_37501355_37501397	0.246713	HOX{A6,A7,B6,B7}.p2	AK034205|Pcdhb7|93878|protocadherin beta 7	NM_053132|Pcdhb7|93878|protocadherin beta 7	AK046463|Pcdhb7|93878|protocadherin beta 7	AK029340|Pcdhb7|93878|protocadherin beta 7	BC094897|Pcdhb7|93878|protocadherin beta 7	AK043979|Pcdhb7|93878|protocadherin beta 7
mm9_v1_chr14_+_56443631_56443725	0.246682	HOX{A6,A7,B6,B7}.p2	NM_001168346|Nfatc4|73181|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	NM_023699|Nfatc4|73181|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
mm9_v1_chr2_+_135883963_135884022	0.246586	HOX{A6,A7,B6,B7}.p2	AK018222|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene	AK045946|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr15_+_12082671_12082674	0.246522	HOX{A6,A7,B6,B7}.p2	AK158938|Zfr|22763|zinc finger RNA binding protein
mm9_v1_chr13_-_61037894_61037926	0.246418	HOX{A6,A7,B6,B7}.p2	AY034577|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	X15591|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	BC028437|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK018801|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK132290|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK167433|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK167664|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	AK005471|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha	NM_001145799|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha
mm9_v1_chr11_+_120459734_120459836	0.246348	HOX{A6,A7,B6,B7}.p2	NM_025389|Anapc11|66156|anaphase promoting complex subunit 11	AK158224|Anapc11|66156|anaphase promoting complex subunit 11	AK003612|Anapc11|66156|anaphase promoting complex subunit 11	AK045408|Anapc11|66156|anaphase promoting complex subunit 11	AK003244|Anapc11|66156|anaphase promoting complex subunit 11	AK136358|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr4_-_9570815_9570863	0.24453	HOX{A6,A7,B6,B7}.p2	AF302654|Asph|65973|aspartate-beta-hydroxylase	AF289490|Asph|65973|aspartate-beta-hydroxylase	AF289491|Asph|65973|aspartate-beta-hydroxylase	AF289492|Asph|65973|aspartate-beta-hydroxylase	AF221854|Asph|65973|aspartate-beta-hydroxylase	AF223413|Asph|65973|aspartate-beta-hydroxylase	NM_001177852|Asph|65973|aspartate-beta-hydroxylase	NM_001177853|Asph|65973|aspartate-beta-hydroxylase	NM_001177854|Asph|65973|aspartate-beta-hydroxylase	NM_133723|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr6_-_113369270_113369339	0.243451	HOX{A6,A7,B6,B7}.p2	BC038081|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	AK133871|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	AK076749|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC116825|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC116827|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC144733|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC144734|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	NM_001033204|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3
mm9_v1_chr9_-_119213954_119213965	0.243267	HOX{A6,A7,B6,B7}.p2	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr9_+_106356125_106356294	0.243243	HOX{A6,A7,B6,B7}.p2	NM_021567|Pcbp4|59092|poly(rC) binding protein 4	AK004580|Pcbp4|59092|poly(rC) binding protein 4	AK005383|Pcbp4|59092|poly(rC) binding protein 4	AK077632|Pcbp4|59092|poly(rC) binding protein 4	AK082005|Pcbp4|59092|poly(rC) binding protein 4	BC010694|Pcbp4|59092|poly(rC) binding protein 4	AF176328|Pcbp4|59092|poly(rC) binding protein 4
mm9_v1_chr10_+_74980789_74980840	0.242285	HOX{A6,A7,B6,B7}.p2	BC011510|Snrpd3|67332|small nuclear ribonucleoprotein D3
mm9_v1_chr7_-_88060541_88060574	0.242112	HOX{A6,A7,B6,B7}.p2	AK184425|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr11_+_48615792_48615849	0.240994	HOX{A6,A7,B6,B7}.p2	BC036295|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr13_-_101500877_101500928	0.240205	HOX{A6,A7,B6,B7}.p2	X74145|Cdk7|12572|cyclin-dependent kinase 7	BC068160|Cdk7|12572|cyclin-dependent kinase 7	AK039084|Cdk7|12572|cyclin-dependent kinase 7	AK168286|Cdk7|12572|cyclin-dependent kinase 7	NM_009874|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr1_+_74589461_74589571	0.239111	HOX{A6,A7,B6,B7}.p2	NM_001081456|Plcd4|18802|phospholipase C, delta 4	AK140231|Plcd4|18802|phospholipase C, delta 4	AK039149|Plcd4|18802|phospholipase C, delta 4	BC066156|Plcd4|18802|phospholipase C, delta 4
mm9_v1_chr9_+_45646611_45646685	0.238553	HOX{A6,A7,B6,B7}.p2	NM_001145947|Bace1|23821|beta-site APP cleaving enzyme 1	NM_011792|Bace1|23821|beta-site APP cleaving enzyme 1	AK033112|Bace1|23821|beta-site APP cleaving enzyme 1	AK041285|Bace1|23821|beta-site APP cleaving enzyme 1	AK080498|Bace1|23821|beta-site APP cleaving enzyme 1	AK082317|Bace1|23821|beta-site APP cleaving enzyme 1	AK163583|Bace1|23821|beta-site APP cleaving enzyme 1	AK046175|Bace1|23821|beta-site APP cleaving enzyme 1	AK082230|Bace1|23821|beta-site APP cleaving enzyme 1	AK049626|Bace1|23821|beta-site APP cleaving enzyme 1	AF190726|Bace1|23821|beta-site APP cleaving enzyme 1	AK014464|Bace1|23821|beta-site APP cleaving enzyme 1	BC048189|Bace1|23821|beta-site APP cleaving enzyme 1
mm9_v1_chr17_-_35291759_35291763	0.238469	HOX{A6,A7,B6,B7}.p2	BC034134|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr17_+_23810567_23810574	0.238293	HOX{A6,A7,B6,B7}.p2	AK013438|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)	NM_181821|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)
mm9_v1_chr10_+_127795461_127795537	0.238202	HOX{A6,A7,B6,B7}.p2	DQ403125|Cs|12974|citrate synthase	AK012104|Cs|12974|citrate synthase
mm9_v1_chr9_-_36551018_36551139	0.23795	HOX{A6,A7,B6,B7}.p2	AK213353|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr16_-_59027730_59027752	0.237509	HOX{A6,A7,B6,B7}.p2	NM_146321|Olfr186|258318|olfactory receptor 186	BC150713|Olfr186|258318|olfactory receptor 186
mm9_v1_chr8_-_42300504_42300520	0.237208	HOX{A6,A7,B6,B7}.p2	AF478470|Fgl1|234199|fibrinogen-like protein 1	AK083397|Fgl1|234199|fibrinogen-like protein 1	NM_145594|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr15_-_36538514_36538548	0.237124	HOX{A6,A7,B6,B7}.p2	X65553|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003928|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr14_-_21275426_21275574	0.236683	HOX{A6,A7,B6,B7}.p2	AK211261|Anxa7|11750|annexin A7
mm9_v1_chr16_-_29378636_29378817	0.236193	HOX{A6,A7,B6,B7}.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr10_-_6980199_6980474	0.235801	HOX{A6,A7,B6,B7}.p2	AK042973|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	NM_133485|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AK047607|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AK085997|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AF407167|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr5_+_139711487_139711530	0.235583	HOX{A6,A7,B6,B7}.p2	AK203786|Sun1|77053|Sad1 and UNC84 domain containing 1
mm9_v1_chr9_-_107775031_107775194	0.235569	HOX{A6,A7,B6,B7}.p2	AK145612|Rbm6|19654|RNA binding motif protein 6	AK078712|Rbm6|19654|RNA binding motif protein 6	AK030451|Rbm6|19654|RNA binding motif protein 6	AK077899|Rbm6|19654|RNA binding motif protein 6	AK134164|Rbm6|19654|RNA binding motif protein 6	AK081846|Rbm6|19654|RNA binding motif protein 6	AK164432|Rbm6|19654|RNA binding motif protein 6	AK029954|Rbm6|19654|RNA binding motif protein 6	NM_011251|Rbm6|19654|RNA binding motif protein 6	NM_029169|Rbm6|19654|RNA binding motif protein 6	BC026129|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr12_+_59312790_59312790	0.234973	HOX{A6,A7,B6,B7}.p2	AK046464|Sstr1|20605|somatostatin receptor 1	NM_009216|Sstr1|20605|somatostatin receptor 1
mm9_v1_chr18_+_12802276_12802325	0.234892	HOX{A6,A7,B6,B7}.p2	BC020021|Ttc39c|72747|tetratricopeptide repeat domain 39C	AK013267|Ttc39c|72747|tetratricopeptide repeat domain 39C
mm9_v1_chr16_+_36041329_36041411	0.234882	HOX{A6,A7,B6,B7}.p2	AK009247|Wdr5b|69544|WD repeat domain 5B	AK165100|Wdr5b|69544|WD repeat domain 5B
mm9_v1_chr9_+_56266415_56266485	0.234874	HOX{A6,A7,B6,B7}.p2	AK017716|Hmg20a|66867|high mobility group 20A	AK129010|Hmg20a|66867|high mobility group 20A	AK134213|Hmg20a|66867|high mobility group 20A
mm9_v1_chr17_-_37451325_37451381	0.234872	HOX{A6,A7,B6,B7}.p2	BC111097|Olfr100|404307|olfactory receptor 100	BC127233|Olfr100|404307|olfactory receptor 100	BC127234|Olfr100|404307|olfactory receptor 100	NM_207673|Olfr100|404307|olfactory receptor 100	BC139114|Olfr102|258218|olfactory receptor 102	BC139115|Olfr102|258218|olfactory receptor 102	NM_001011721|Olfr102|258218|olfactory receptor 102
mm9_v1_chr12_+_79849976_79850002	0.234307	HOX{A6,A7,B6,B7}.p2	AK032731|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK162014|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC075698|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK014444|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr17_-_12888210_12888210	0.232477	HOX{A6,A7,B6,B7}.p2	AK053045|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr14_+_56443805_56443873	0.231851	HOX{A6,A7,B6,B7}.p2	BC028928|Nfatc4|73181|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	EU887656|Nfatc4|73181|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	EU887657|Nfatc4|73181|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
mm9_v1_chr17_-_34740422_34740567	0.231805	HOX{A6,A7,B6,B7}.p2	BC012031|Rnf5|54197|ring finger protein 5	AK012729|Rnf5|54197|ring finger protein 5	AK020514|Rnf5|54197|ring finger protein 5	BC016449|Rnf5|54197|ring finger protein 5	NM_019403|Rnf5|54197|ring finger protein 5	AK019289|Rnf5|54197|ring finger protein 5	AK020515|Rnf5|54197|ring finger protein 5	AK010792|Rnf5|54197|ring finger protein 5
mm9_v1_chr17_-_35975075_35975143	0.231642	HOX{A6,A7,B6,B7}.p2	X04663|Tubb5|22154|tubulin, beta 5
mm9_v1_chr15_-_79359492_79359560	0.231199	HOX{A6,A7,B6,B7}.p2	AK205483|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK212707|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr5_-_147396407_147396450	0.230982	HOX{A6,A7,B6,B7}.p2	D21061|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chrX_+_100551808_100551914	0.230785	HOX{A6,A7,B6,B7}.p2	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr3_-_95695852_95695897	0.230124	HOX{A6,A7,B6,B7}.p2	AF534879|BC028528|229600|cDNA sequence BC028528	NM_153513|BC028528|229600|cDNA sequence BC028528	BC028528|BC028528|229600|cDNA sequence BC028528
mm9_v1_chr8_+_87564408_87564553	0.229473	HOX{A6,A7,B6,B7}.p2	AK043707|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr4_+_118081908_118082012	0.229272	HOX{A6,A7,B6,B7}.p2	AK011080|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_020000|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_173719|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK147032|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK005422|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK148025|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC051683|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK008759|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC021870|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AB041805|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm9_v1_chr11_-_70501430_70501474	0.228596	HOX{A6,A7,B6,B7}.p2	AK039670|Camta2|216874|calmodulin binding transcription activator 2	BC049133|Camta2|216874|calmodulin binding transcription activator 2	BC056395|Camta2|216874|calmodulin binding transcription activator 2	AK169118|Camta2|216874|calmodulin binding transcription activator 2	AK150186|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr18_+_42671147_42671160	0.228426	HOX{A6,A7,B6,B7}.p2	AK150312|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AK013830|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AK010571|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr19_+_12040391_12040437	0.227936	HOX{A6,A7,B6,B7}.p2	BC107327|Osbp|76303|oxysterol binding protein	BC107328|Osbp|76303|oxysterol binding protein
mm9_v1_chr2_+_32307683_32307754	0.227884	HOX{A6,A7,B6,B7}.p2	BC057613|Naif1|71254|nuclear apoptosis inducing factor 1
mm9_v1_chr15_-_36538272_36538277	0.227788	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_121063210_121063281	0.227605	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_136386420_136386446	0.227119	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_156588506_156588592	0.226774	HOX{A6,A7,B6,B7}.p2	AK179758|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK186004|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr2_+_169459145_169459258	0.226652	HOX{A6,A7,B6,B7}.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr9_-_37464614_37464896	0.22643	HOX{A6,A7,B6,B7}.p2	AK185995|Tbrg1|21376|transforming growth factor beta regulated gene 1	DQ144541|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK131638|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151075|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151209|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC054057|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC037145|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151457|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC040813|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC065795|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC043022|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK166547|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK011268|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK150549|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK003270|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK011614|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK010925|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC021331|Tbrg1|21376|transforming growth factor beta regulated gene 1	NM_025289|Tbrg1|21376|transforming growth factor beta regulated gene 1
mm9_v1_chr1_+_83156336_83156343	0.225824	HOX{A6,A7,B6,B7}.p2	AK016977|Wdr69|71227|WD repeat domain 69	BC049704|Wdr69|71227|WD repeat domain 69	BC144994|Wdr69|71227|WD repeat domain 69	BC145995|Wdr69|71227|WD repeat domain 69	NM_027725|Wdr69|71227|WD repeat domain 69	AK016201|Wdr69|71227|WD repeat domain 69
mm9_v1_chr2_-_48804794_48804803	0.225246	HOX{A6,A7,B6,B7}.p2	AK145454|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr11_-_84338922_84339036	0.225129	HOX{A6,A7,B6,B7}.p2	Z27410|Lhx1|16869|LIM homeobox protein 1	BC092374|Lhx1|16869|LIM homeobox protein 1	NM_008498|Lhx1|16869|LIM homeobox protein 1	AK141086|Lhx1|16869|LIM homeobox protein 1
mm9_v1_chr18_-_84851298_84851466	0.225075	HOX{A6,A7,B6,B7}.p2	AK131124|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK149751|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152729|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK153040|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152442|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK159129|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr14_-_60845511_60845640	0.224965	HOX{A6,A7,B6,B7}.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr7_+_117161896_117161938	0.224652	HOX{A6,A7,B6,B7}.p2	AY316153|Ipo7|233726|importin 7	NM_181517|Ipo7|233726|importin 7
mm9_v1_chr6_+_38868942_38869113	0.224522	HOX{A6,A7,B6,B7}.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chrX_+_38754658_38754822	0.224321	HOX{A6,A7,B6,B7}.p2	AK161163|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB022342|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129855|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129856|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK220530|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK135043|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB079072|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102775|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102776|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483494|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483495|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK046158|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr3_+_88101146_88101153	0.223505	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_65756482_65756602	0.223262	HOX{A6,A7,B6,B7}.p2	AF539614|Trip4|56404|thyroid hormone receptor interactor 4	AK016170|Trip4|56404|thyroid hormone receptor interactor 4	AK139423|Trip4|56404|thyroid hormone receptor interactor 4	AK166192|Trip4|56404|thyroid hormone receptor interactor 4	NM_019797|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr7_+_112702873_112703308	0.223187	HOX{A6,A7,B6,B7}.p2	AK145702|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	NM_011421|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK148189|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK088147|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK145534|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK149579|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK164167|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	Z14252|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	BC011304|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK138133|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	BC034515|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK167802|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK164717|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK191535|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK189506|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK194268|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK197635|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK200654|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK203746|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal
mm9_v1_chr15_+_81626455_81626512	0.222896	HOX{A6,A7,B6,B7}.p2	AJ223207|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr5_-_136386045_136386060	0.222594	HOX{A6,A7,B6,B7}.p2	AK179188|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK181145|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK191464|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr15_-_102455489_102455515	0.222396	HOX{A6,A7,B6,B7}.p2	AK047901|Atf7|223922|activating transcription factor 7
mm9_v1_chr9_+_5345475_5345506	0.221915	HOX{A6,A7,B6,B7}.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr1_+_174271338_174271373	0.221537	HOX{A6,A7,B6,B7}.p2	AK048864|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	NM_001039484|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr2_+_113839219_113839495	0.221237	HOX{A6,A7,B6,B7}.p2	AK082668|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK045761|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK043120|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK044743|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK046235|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK045885|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene
mm9_v1_chr8_-_26212242_26212282	0.220965	HOX{A6,A7,B6,B7}.p2	AK042324|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2	AK078212|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2	NM_031257|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm9_v1_chr17_-_28502087_28502126	0.220876	HOX{A6,A7,B6,B7}.p2	NM_021478|Tulp1|22157|tubby like protein 1	BC014820|Tulp1|22157|tubby like protein 1	BC029222|Tulp1|22157|tubby like protein 1
mm9_v1_chr6_-_120745390_120745474	0.22063	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_27883092_27883235	0.220015	HOX{A6,A7,B6,B7}.p2	NM_008875|Pld1|18805|phospholipase D1	BC068144|Pld1|18805|phospholipase D1
mm9_v1_chr2_-_77357674_77357722	0.219853	HOX{A6,A7,B6,B7}.p2	AK078551|Zfp385b|241494|zinc finger protein 385B	AK050293|Zfp385b|241494|zinc finger protein 385B	NM_001113400|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr2_-_152655725_152655826	0.219727	HOX{A6,A7,B6,B7}.p2	U10100|Bcl2l1|12048|BCL2-like 1	U10101|Bcl2l1|12048|BCL2-like 1	X83574|Bcl2l1|12048|BCL2-like 1	BC089017|Bcl2l1|12048|BCL2-like 1	U51278|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr1_-_94076857_94076917	0.219666	HOX{A6,A7,B6,B7}.p2	AK155250|Hdac4|208727|histone deacetylase 4
mm9_v1_chr2_-_92241357_92241532	0.219532	HOX{A6,A7,B6,B7}.p2	AF003115|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	AF054611|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	NM_011162|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1
mm9_v1_chr2_-_58419558_58419636	0.219049	HOX{A6,A7,B6,B7}.p2	L15436|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr15_-_64753721_64753861	0.218982	HOX{A6,A7,B6,B7}.p2	U85021|Adcy8|11514|adenylate cyclase 8	BC094231|Adcy8|11514|adenylate cyclase 8	AK163443|Adcy8|11514|adenylate cyclase 8	AK138244|Adcy8|11514|adenylate cyclase 8	NM_009623|Adcy8|11514|adenylate cyclase 8
mm9_v1_chr6_-_72312366_72312409	0.218877	HOX{A6,A7,B6,B7}.p2	BC005559|Rnf181|66510|ring finger protein 181	BC083119|Rnf181|66510|ring finger protein 181	NM_025607|Rnf181|66510|ring finger protein 181	AK168670|Rnf181|66510|ring finger protein 181	AK010854|Rnf181|66510|ring finger protein 181	AK014094|Rnf181|66510|ring finger protein 181	AK159788|Rnf181|66510|ring finger protein 181	AK166904|Rnf181|66510|ring finger protein 181	AK166995|Rnf181|66510|ring finger protein 181	AK167396|Rnf181|66510|ring finger protein 181	AK167633|Rnf181|66510|ring finger protein 181	AK167935|Rnf181|66510|ring finger protein 181
mm9_v1_chr15_-_102455518_102455529	0.2185	HOX{A6,A7,B6,B7}.p2	AK039648|Atf7|223922|activating transcription factor 7	AK154588|Atf7|223922|activating transcription factor 7	AK155046|Atf7|223922|activating transcription factor 7
mm9_v1_chr10_-_90582332_90582452	0.21842	HOX{A6,A7,B6,B7}.p2	AK195219|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK212727|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK216642|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK180258|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK188364|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr15_+_10106992_10106998	0.218209	HOX{A6,A7,B6,B7}.p2	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr13_+_94073701_94073756	0.218204	HOX{A6,A7,B6,B7}.p2	AK137151|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr18_+_65210574_65210693	0.218113	HOX{A6,A7,B6,B7}.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr5_-_123183537_123183571	0.218054	HOX{A6,A7,B6,B7}.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr11_+_29642253_29642464	0.217993	HOX{A6,A7,B6,B7}.p2	AK186869|Rtn4|68585|reticulon 4	AK186438|Rtn4|68585|reticulon 4	AK047253|Rtn4|68585|reticulon 4
mm9_v1_chr10_+_127525425_127525449	0.217837	HOX{A6,A7,B6,B7}.p2	AK003460|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr2_+_131735663_131735721	0.217737	HOX{A6,A7,B6,B7}.p2	NM_011170|Prnp|19122|prion protein	AK148061|Prnp|19122|prion protein	AK158908|Prnp|19122|prion protein	AK159056|Prnp|19122|prion protein	AK162504|Prnp|19122|prion protein	AK148892|Prnp|19122|prion protein	AK157840|Prnp|19122|prion protein	AK150963|Prnp|19122|prion protein	AK159224|Prnp|19122|prion protein	AK160091|Prnp|19122|prion protein
mm9_v1_chr6_-_35258102_35258131	0.217734	HOX{A6,A7,B6,B7}.p2	BC089161|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK036354|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	NM_172892|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK038937|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK139428|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4
mm9_v1_chr19_+_27291897_27291921	0.217639	HOX{A6,A7,B6,B7}.p2	U06670|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr17_+_28369642_28369770	0.217424	HOX{A6,A7,B6,B7}.p2	NM_011145|Ppard|19015|peroxisome proliferator activator receptor delta	AK154567|Ppard|19015|peroxisome proliferator activator receptor delta	BC070398|Ppard|19015|peroxisome proliferator activator receptor delta	AK089913|Ppard|19015|peroxisome proliferator activator receptor delta
mm9_v1_chr14_-_56503058_56503074	0.217322	HOX{A6,A7,B6,B7}.p2	AK081085|Cbln3|56410|cerebellin 3 precursor protein	AF218379|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr13_+_40982534_40982735	0.216566	HOX{A6,A7,B6,B7}.p2	NM_008105|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK080061|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK054226|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AB037597|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435149|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr6_-_113327369_113327436	0.216434	HOX{A6,A7,B6,B7}.p2	BC032195|Tada3|101206|transcriptional adaptor 3	AK187590|Tada3|101206|transcriptional adaptor 3
mm9_v1_chr13_-_34222209_34222227	0.216323	HOX{A6,A7,B6,B7}.p2	BC138935|Tubb2b|73710|tubulin, beta 2B	BC138936|Tubb2b|73710|tubulin, beta 2B	AK168908|Tubb2b|73710|tubulin, beta 2B	AK010786|Tubb2b|73710|tubulin, beta 2B	NM_023716|Tubb2b|73710|tubulin, beta 2B
mm9_v1_chr8_-_87956606_87956658	0.216141	HOX{A6,A7,B6,B7}.p2	AK007050|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK013123|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC040087|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr13_-_106084846_106084897	0.215807	HOX{A6,A7,B6,B7}.p2	AK013941|Rnf180|71816|ring finger protein 180
mm9_v1_chr5_+_3344201_3344322	0.21548	HOX{A6,A7,B6,B7}.p2	AK078973|Cdk6|12571|cyclin-dependent kinase 6	AF132483|Cdk6|12571|cyclin-dependent kinase 6	NM_009873|Cdk6|12571|cyclin-dependent kinase 6	BC119360|Cdk6|12571|cyclin-dependent kinase 6	BC120595|Cdk6|12571|cyclin-dependent kinase 6
mm9_v1_chr18_+_37120093_37120209	0.215394	HOX{A6,A7,B6,B7}.p2	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr3_+_89070473_89070560	0.214645	HOX{A6,A7,B6,B7}.p2	AK003223|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	NM_026767|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	BC037761|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3
mm9_v1_chr12_-_70260041_70260125	0.214361	HOX{A6,A7,B6,B7}.p2	BC051203|Rps29|20090|ribosomal protein S29	L31609|Rps29|20090|ribosomal protein S29	AK012285|Rps29|20090|ribosomal protein S29	AK002939|Rps29|20090|ribosomal protein S29	BC055750|Rps29|20090|ribosomal protein S29
mm9_v1_chr8_+_26211563_26211687	0.214302	HOX{A6,A7,B6,B7}.p2	AK012291|2700026D01Rik|72559|RIKEN cDNA 2700026D01 gene
mm9_v1_chrX_-_101866123_101866164	0.21423	HOX{A6,A7,B6,B7}.p2	AK032922|Zdhhc15|108672|zinc finger, DHHC domain containing 15	AK029137|Zdhhc15|108672|zinc finger, DHHC domain containing 15	AK160360|Zdhhc15|108672|zinc finger, DHHC domain containing 15	AK077949|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr6_+_90424727_90424917	0.214026	HOX{A6,A7,B6,B7}.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr12_-_82695944_82695966	0.213753	HOX{A6,A7,B6,B7}.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr11_-_109159357_109159494	0.213741	HOX{A6,A7,B6,B7}.p2	BC129899|Rgs9|19739|regulator of G-protein signaling 9	BC129898|Rgs9|19739|regulator of G-protein signaling 9	AF011358|Rgs9|19739|regulator of G-protein signaling 9	AK138159|Rgs9|19739|regulator of G-protein signaling 9	AK085443|Rgs9|19739|regulator of G-protein signaling 9	AF125046|Rgs9|19739|regulator of G-protein signaling 9	AK164961|Rgs9|19739|regulator of G-protein signaling 9	NM_001165934|Rgs9|19739|regulator of G-protein signaling 9	NM_011268|Rgs9|19739|regulator of G-protein signaling 9
mm9_v1_chr15_+_82176533_82176625	0.213315	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_91881454_91881500	0.21329	HOX{A6,A7,B6,B7}.p2	BC117825|Gspt2|14853|G1 to S phase transition 2	BC117826|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr1_+_74708306_74708411	0.212761	HOX{A6,A7,B6,B7}.p2	BC085151|Ttll4|67534|tubulin tyrosine ligase-like family, member 4	NM_001014974|Ttll4|67534|tubulin tyrosine ligase-like family, member 4
mm9_v1_chr18_+_78016353_78016381	0.212527	HOX{A6,A7,B6,B7}.p2	AK164193|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr11_-_119409041_119409133	0.212202	HOX{A6,A7,B6,B7}.p2	BC139018|Nptx1|18164|neuronal pentraxin 1	BC139020|Nptx1|18164|neuronal pentraxin 1	BC093479|Nptx1|18164|neuronal pentraxin 1	NM_008730|Nptx1|18164|neuronal pentraxin 1
mm9_v1_chr5_-_123183255_123183351	0.211959	HOX{A6,A7,B6,B7}.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr17_-_37095372_37095414	0.211352	HOX{A6,A7,B6,B7}.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chrX_-_133275693_133275798	0.211006	HOX{A6,A7,B6,B7}.p2	NM_001168225|Morf4l2|56397|mortality factor 4 like 2	AK183992|Morf4l2|56397|mortality factor 4 like 2	AK129038|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr3_-_83967952_83967954	0.210861	HOX{A6,A7,B6,B7}.p2	AK054540|Trim2|80890|tripartite motif-containing 2
mm9_v1_chr12_-_86217386_86217481	0.210745	HOX{A6,A7,B6,B7}.p2	BC119785|Ltbp2|16997|latent transforming growth factor beta binding protein 2	AK052980|Ltbp2|16997|latent transforming growth factor beta binding protein 2	NM_013589|Ltbp2|16997|latent transforming growth factor beta binding protein 2	AF004874|Ltbp2|16997|latent transforming growth factor beta binding protein 2
mm9_v1_chr8_+_123640069_123640092	0.210521	HOX{A6,A7,B6,B7}.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr18_-_13100228_13100349	0.209704	HOX{A6,A7,B6,B7}.p2	AY536214|Osbpl1a|64291|oxysterol binding protein-like 1A	NM_207530|Osbpl1a|64291|oxysterol binding protein-like 1A	BC031735|Osbpl1a|64291|oxysterol binding protein-like 1A	AK090069|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr11_-_95375878_95375924	0.208979	HOX{A6,A7,B6,B7}.p2	AK158760|Nxph3|104079|neurexophilin 3	NM_130858|Nxph3|104079|neurexophilin 3
mm9_v1_chr5_-_135096236_135096321	0.208437	HOX{A6,A7,B6,B7}.p2	AK202900|Eif4h|22384|eukaryotic translation initiation factor 4H	AK197136|Eif4h|22384|eukaryotic translation initiation factor 4H	AK192982|Eif4h|22384|eukaryotic translation initiation factor 4H	AK200162|Eif4h|22384|eukaryotic translation initiation factor 4H	AK195162|Eif4h|22384|eukaryotic translation initiation factor 4H	AK191422|Eif4h|22384|eukaryotic translation initiation factor 4H	AK191093|Eif4h|22384|eukaryotic translation initiation factor 4H	AK192082|Eif4h|22384|eukaryotic translation initiation factor 4H	AK194320|Eif4h|22384|eukaryotic translation initiation factor 4H	AK195976|Eif4h|22384|eukaryotic translation initiation factor 4H	AK197414|Eif4h|22384|eukaryotic translation initiation factor 4H	AK202850|Eif4h|22384|eukaryotic translation initiation factor 4H	AK204156|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr10_+_34018323_34018472	0.208411	HOX{A6,A7,B6,B7}.p2	AK028517|Tspyl4|72480|TSPY-like 4
mm9_v1_chr13_+_58909632_58909641	0.207963	HOX{A6,A7,B6,B7}.p2	AK147441|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr10_-_112363848_112364044	0.207734	HOX{A6,A7,B6,B7}.p2	AK078766|Atxn7l3b|382423|ataxin 7-like 3B	AK051537|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr15_+_35860580_35860704	0.207419	HOX{A6,A7,B6,B7}.p2	AK007749|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr7_+_82846863_82846922	0.207273	HOX{A6,A7,B6,B7}.p2	AK133803|Akap13|75547|A kinase (PRKA) anchor protein 13	AK037815|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chr9_+_107950526_107950735	0.207084	HOX{A6,A7,B6,B7}.p2	AK214785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr18_-_70301202_70301243	0.206859	HOX{A6,A7,B6,B7}.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr7_+_151361424_151361430	0.206574	HOX{A6,A7,B6,B7}.p2	AK139360|Shank2|210274|SH3/ankyrin domain gene 2	NM_001113373|Shank2|210274|SH3/ankyrin domain gene 2
mm9_v1_chr5_+_104864146_104864160	0.205993	HOX{A6,A7,B6,B7}.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr3_+_52072251_52072295	0.20486	HOX{A6,A7,B6,B7}.p2	AK154041|Foxo1|56458|forkhead box O1	NM_019739|Foxo1|56458|forkhead box O1	AJ252157|Foxo1|56458|forkhead box O1
mm9_v1_chr19_-_29101759_29101824	0.204712	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_96945972_96946140	0.204324	HOX{A6,A7,B6,B7}.p2	BC060126|Dcn|13179|decorin	Y11757|Dcn|13179|decorin
mm9_v1_chr16_-_32877730_32877851	0.204244	HOX{A6,A7,B6,B7}.p2	AK170312|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr19_-_43827386_43827505	0.203941	HOX{A6,A7,B6,B7}.p2	AK051792|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	BC021498|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	AK141631|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	BC011509|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	AK048099|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	NM_144874|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)
mm9_v1_chr19_+_17030600_17030608	0.203848	HOX{A6,A7,B6,B7}.p2	AK165582|Prune2|353211|prune homolog 2 (Drosophila)	AK020727|Prune2|353211|prune homolog 2 (Drosophila)	AK039241|Prune2|353211|prune homolog 2 (Drosophila)	AK165913|Prune2|353211|prune homolog 2 (Drosophila)	NM_181348|Prune2|353211|prune homolog 2 (Drosophila)
mm9_v1_chr6_-_148937854_148937926	0.203421	HOX{A6,A7,B6,B7}.p2	AK143126|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr19_-_44481898_44481917	0.203391	HOX{A6,A7,B6,B7}.p2	CT010171|Scd1|20249|stearoyl-Coenzyme A desaturase 1	CT010332|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr15_-_103197178_103197295	0.203253	HOX{A6,A7,B6,B7}.p2	BC053431|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	NM_010577|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	BC050943|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	BC059829|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)
mm9_v1_chr13_-_35998160_35998229	0.202245	HOX{A6,A7,B6,B7}.p2	BC024607|Rpp40|208366|ribonuclease P 40 subunit (human)	BC037666|Rpp40|208366|ribonuclease P 40 subunit (human)	AK048810|Rpp40|208366|ribonuclease P 40 subunit (human)	NM_145938|Rpp40|208366|ribonuclease P 40 subunit (human)
mm9_v1_chr10_-_127617294_127617366	0.202003	HOX{A6,A7,B6,B7}.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr1_+_75518349_75518365	0.201601	HOX{A6,A7,B6,B7}.p2	AK171989|Stk11ip|71728|serine/threonine kinase 11 interacting protein	BC042403|Stk11ip|71728|serine/threonine kinase 11 interacting protein
mm9_v1_chr5_-_136386463_136386544	0.201509	HOX{A6,A7,B6,B7}.p2	AK192597|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK208362|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr17_-_48061354_48061450	0.201222	HOX{A6,A7,B6,B7}.p2	BC043702|Foxp4|74123|forkhead box P4	AY135029|Foxp4|74123|forkhead box P4	BC052407|Foxp4|74123|forkhead box P4	AK004693|Foxp4|74123|forkhead box P4	AB052766|Foxp4|74123|forkhead box P4	BC023368|Foxp4|74123|forkhead box P4	AK143194|Foxp4|74123|forkhead box P4
mm9_v1_chr5_+_144165615_144165640	0.2012	HOX{A6,A7,B6,B7}.p2	CT010232|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
mm9_v1_chr14_-_21613162_21613325	0.200932	HOX{A6,A7,B6,B7}.p2	AF395884|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK154764|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC025597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK078311|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC019162|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK081969|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK031213|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK054406|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039138|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039139|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_178597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma
mm9_v1_chr4_+_134481298_134481299	0.200471	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_65618633_65618779	0.200299	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_37211467_37211494	0.200296	HOX{A6,A7,B6,B7}.p2	NM_001008502|Bbs12|241950|Bardet-Biedl syndrome 12 (human)	AK156806|Bbs12|241950|Bardet-Biedl syndrome 12 (human)
mm9_v1_chr9_-_111174027_111174065	0.200067	HOX{A6,A7,B6,B7}.p2	AF250844|Mlh1|17350|mutL homolog 1 (E. coli)	AK163861|Mlh1|17350|mutL homolog 1 (E. coli)	AK168849|Mlh1|17350|mutL homolog 1 (E. coli)	AK145646|Mlh1|17350|mutL homolog 1 (E. coli)	BC021815|Mlh1|17350|mutL homolog 1 (E. coli)
mm9_v1_chr6_+_54251485_54251608	0.199998	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_-_58689068_58689133	0.199957	HOX{A6,A7,B6,B7}.p2	AK041623|Clrn1|229320|clarin 1	AK042523|Clrn1|229320|clarin 1	BC132254|Clrn1|229320|clarin 1	BC132256|Clrn1|229320|clarin 1	BC145202|Clrn1|229320|clarin 1	AF495718|Clrn1|229320|clarin 1	AF495719|Clrn1|229320|clarin 1	AF495720|Clrn1|229320|clarin 1	NM_153384|Clrn1|229320|clarin 1	NM_153385|Clrn1|229320|clarin 1	NM_153386|Clrn1|229320|clarin 1
mm9_v1_chr18_-_31476527_31476591	0.199943	HOX{A6,A7,B6,B7}.p2	AK046484|Rit2|19762|Ras-like without CAAX 2	AK138206|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr1_-_186696546_186696657	0.199642	HOX{A6,A7,B6,B7}.p2	BC129956|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene
mm9_v1_chr11_-_100259061_100259098	0.199132	HOX{A6,A7,B6,B7}.p2	AK170934|Jup|16480|junction plakoglobin	AK171501|Jup|16480|junction plakoglobin	AK145895|Jup|16480|junction plakoglobin
mm9_v1_chr19_-_10557362_10557417	0.198302	HOX{A6,A7,B6,B7}.p2	BC118523|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AY032666|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	NM_133689|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK005821|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK016325|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene
mm9_v1_chrX_+_102318792_102318798	0.198236	HOX{A6,A7,B6,B7}.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr12_+_118896501_118896507	0.197553	HOX{A6,A7,B6,B7}.p2	AK083591|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr8_-_18741546_18741552	0.197488	HOX{A6,A7,B6,B7}.p2	AK143974|Angpt2|11601|angiopoietin 2	AK019860|Angpt2|11601|angiopoietin 2	NM_007426|Angpt2|11601|angiopoietin 2
mm9_v1_chr2_+_104430774_104430855	0.197471	HOX{A6,A7,B6,B7}.p2	AK083093|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	AK159180|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm9_v1_chr19_-_8787823_8787985	0.197279	HOX{A6,A7,B6,B7}.p2	AK215373|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK156285|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr8_-_88077181_88077304	0.196941	HOX{A6,A7,B6,B7}.p2	AK212721|Dnaja2|56445|DnaJ (Hsp40) homolog, subfamily A, member 2
mm9_v1_chr3_+_95039985_95040105	0.19687	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_-_4801605_4801652	0.196765	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_55995361_55995384	0.196736	HOX{A6,A7,B6,B7}.p2	AK212256|Tspan3|56434|tetraspanin 3
mm9_v1_chr13_+_81850415_81850532	0.196592	HOX{A6,A7,B6,B7}.p2	AK046032|Mblac2|72852|metallo-beta-lactamase domain containing 2	NM_028372|Mblac2|72852|metallo-beta-lactamase domain containing 2	AK013594|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC107207|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC114401|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC107206|Mblac2|72852|metallo-beta-lactamase domain containing 2
mm9_v1_chr15_-_102455844_102455918	0.196488	HOX{A6,A7,B6,B7}.p2	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr4_-_46662986_46663080	0.19646	HOX{A6,A7,B6,B7}.p2	AK148289|Tbc1d2|381605|TBC1 domain family, member 2	AK148254|Tbc1d2|381605|TBC1 domain family, member 2	NM_198664|Tbc1d2|381605|TBC1 domain family, member 2	AK041359|Tbc1d2|381605|TBC1 domain family, member 2
mm9_v1_chr14_+_45949451_45949542	0.196425	HOX{A6,A7,B6,B7}.p2	AK012174|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC116752|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC119168|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	NM_025959|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK144728|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK014354|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC037099|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK166961|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC043044|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC057997|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm9_v1_chr17_+_56239829_56239958	0.195876	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_97311458_97311517	0.195787	HOX{A6,A7,B6,B7}.p2	NM_021493|Arhgap23|58996|Rho GTPase activating protein 23
mm9_v1_chr3_+_102824510_102824537	0.195723	HOX{A6,A7,B6,B7}.p2	AK146586|Csde1|229663|cold shock domain containing E1, RNA binding	AK147012|Csde1|229663|cold shock domain containing E1, RNA binding	AK151723|Csde1|229663|cold shock domain containing E1, RNA binding	AK151970|Csde1|229663|cold shock domain containing E1, RNA binding	AK144097|Csde1|229663|cold shock domain containing E1, RNA binding	BC029688|Csde1|229663|cold shock domain containing E1, RNA binding	AK151638|Csde1|229663|cold shock domain containing E1, RNA binding	AK152531|Csde1|229663|cold shock domain containing E1, RNA binding	AK168556|Csde1|229663|cold shock domain containing E1, RNA binding	AK159258|Csde1|229663|cold shock domain containing E1, RNA binding	AK159863|Csde1|229663|cold shock domain containing E1, RNA binding	AK146706|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr6_-_146582942_146583021	0.19555	HOX{A6,A7,B6,B7}.p2	AK204708|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK010720|Tm7sf3|67623|transmembrane 7 superfamily member 3	BC049960|Tm7sf3|67623|transmembrane 7 superfamily member 3
mm9_v1_chr11_+_87861368_87861382	0.195402	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_134638361_134638397	0.194862	HOX{A6,A7,B6,B7}.p2	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr7_-_151622848_151622956	0.19463	HOX{A6,A7,B6,B7}.p2	AK184845|Cttn|13043|cortactin
mm9_v1_chr11_+_102146273_102146324	0.19459	HOX{A6,A7,B6,B7}.p2	AK132118|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	NM_028076|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK157408|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	BC016187|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK008158|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2
mm9_v1_chr4_+_71862277_71862381	0.194425	HOX{A6,A7,B6,B7}.p2	AK041409|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK043880|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK053841|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083963|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK039121|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK012513|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083285|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK042990|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene
mm9_v1_chr14_+_63761424_63761426	0.194276	HOX{A6,A7,B6,B7}.p2	AK218343|Ctsb|13030|cathepsin B	AK219981|Ctsb|13030|cathepsin B
mm9_v1_chr4_+_151307819_151307875	0.19412	HOX{A6,A7,B6,B7}.p2	NM_172704|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK089983|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK053156|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK156793|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK171781|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK172542|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC075619|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC085257|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC079852|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11
mm9_v1_chr2_+_121282819_121282836	0.19411	HOX{A6,A7,B6,B7}.p2	NM_026318|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	AK003580|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC038469|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	AK009109|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr2_+_17976897_17976897	0.193799	HOX{A6,A7,B6,B7}.p2	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr3_+_60276971_60277044	0.193676	HOX{A6,A7,B6,B7}.p2	AK153827|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr14_-_46277274_46277306	0.193485	HOX{A6,A7,B6,B7}.p2	AK048690|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr4_-_132768403_132768450	0.193174	HOX{A6,A7,B6,B7}.p2	AK140464|Gpr3|14748|G-protein coupled receptor 3	AK158917|Gpr3|14748|G-protein coupled receptor 3	AK140302|Gpr3|14748|G-protein coupled receptor 3	NM_008154|Gpr3|14748|G-protein coupled receptor 3
mm9_v1_chr2_-_114001033_114001080	0.192483	HOX{A6,A7,B6,B7}.p2	AK151716|Aqr|11834|aquarius	BC042479|Aqr|11834|aquarius	AK145547|Aqr|11834|aquarius	AK077886|Aqr|11834|aquarius	AK122310|Aqr|11834|aquarius	AK016322|Aqr|11834|aquarius	AK020468|Aqr|11834|aquarius	NM_009702|Aqr|11834|aquarius
mm9_v1_chr13_+_94077988_94077988	0.192199	HOX{A6,A7,B6,B7}.p2	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr2_-_34708015_34708026	0.191806	HOX{A6,A7,B6,B7}.p2	AK189840|Psmd5|66998|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
mm9_v1_chr11_-_49488485_49488495	0.191714	HOX{A6,A7,B6,B7}.p2	AK039164|Cnot6|104625|CCR4-NOT transcription complex, subunit 6	AK169707|Cnot6|104625|CCR4-NOT transcription complex, subunit 6
mm9_v1_chr1_+_88423294_88423305	0.191664	HOX{A6,A7,B6,B7}.p2	AK132003|Ptma|19231|prothymosin alpha	AK142076|Ptma|19231|prothymosin alpha	AK153953|Ptma|19231|prothymosin alpha	AK151511|Ptma|19231|prothymosin alpha	AK088005|Ptma|19231|prothymosin alpha	AK037980|Ptma|19231|prothymosin alpha	AK143576|Ptma|19231|prothymosin alpha	AK145650|Ptma|19231|prothymosin alpha	AK146454|Ptma|19231|prothymosin alpha	AK146651|Ptma|19231|prothymosin alpha	AK146849|Ptma|19231|prothymosin alpha	AK151768|Ptma|19231|prothymosin alpha	AK153178|Ptma|19231|prothymosin alpha	AK153496|Ptma|19231|prothymosin alpha	AK159128|Ptma|19231|prothymosin alpha	AK084218|Ptma|19231|prothymosin alpha	AK159170|Ptma|19231|prothymosin alpha	AK151289|Ptma|19231|prothymosin alpha	AK152032|Ptma|19231|prothymosin alpha
mm9_v1_chr17_-_35372703_35372759	0.190899	HOX{A6,A7,B6,B7}.p2	AK133517|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC013269|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF095902|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_010909|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
mm9_v1_chrX_-_101176600_101176631	0.190898	HOX{A6,A7,B6,B7}.p2	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr7_+_52973440_52973511	0.190637	HOX{A6,A7,B6,B7}.p2	AK145649|Rpl18|19899|ribosomal protein L18	NM_009077|Rpl18|19899|ribosomal protein L18	AK007263|Rpl18|19899|ribosomal protein L18	AK151667|Rpl18|19899|ribosomal protein L18	AK166803|Rpl18|19899|ribosomal protein L18	AK010510|Rpl18|19899|ribosomal protein L18	AK012580|Rpl18|19899|ribosomal protein L18	AK153172|Rpl18|19899|ribosomal protein L18	AK169659|Rpl18|19899|ribosomal protein L18	AK168288|Rpl18|19899|ribosomal protein L18	AK009044|Rpl18|19899|ribosomal protein L18	BC081468|Rpl18|19899|ribosomal protein L18	BC082290|Rpl18|19899|ribosomal protein L18	L04128|Rpl18|19899|ribosomal protein L18	BC091732|Rpl18|19899|ribosomal protein L18
mm9_v1_chr7_-_134158693_134158794	0.189606	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_22185840_22185840	0.189592	HOX{A6,A7,B6,B7}.p2	AF424697|Ehbp1|216565|EH domain binding protein 1	NM_153078|Ehbp1|216565|EH domain binding protein 1
mm9_v1_chr9_-_71959599_71959699	0.189559	HOX{A6,A7,B6,B7}.p2	M97635|Tcf12|21406|transcription factor 12	BC037097|Tcf12|21406|transcription factor 12	AK143246|Tcf12|21406|transcription factor 12	NM_011544|Tcf12|21406|transcription factor 12	AK169800|Tcf12|21406|transcription factor 12
mm9_v1_chr2_-_29108499_29108525	0.189477	HOX{A6,A7,B6,B7}.p2	AK079298|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene	BC066084|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene	AK018312|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene
mm9_v1_chr4_+_97439255_97439362	0.18923	HOX{A6,A7,B6,B7}.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr3_+_40603872_40603975	0.189225	HOX{A6,A7,B6,B7}.p2	NM_011495|Plk4|20873|polo-like kinase 4 (Drosophila)	AK045082|Plk4|20873|polo-like kinase 4 (Drosophila)	AK137080|Plk4|20873|polo-like kinase 4 (Drosophila)	AK137471|Plk4|20873|polo-like kinase 4 (Drosophila)	AK164465|Plk4|20873|polo-like kinase 4 (Drosophila)	AK006827|Plk4|20873|polo-like kinase 4 (Drosophila)	L29479|Plk4|20873|polo-like kinase 4 (Drosophila)	L29480|Plk4|20873|polo-like kinase 4 (Drosophila)	BC026785|Plk4|20873|polo-like kinase 4 (Drosophila)	BC057940|Plk4|20873|polo-like kinase 4 (Drosophila)
mm9_v1_chr4_+_8618067_8618067	0.189131	HOX{A6,A7,B6,B7}.p2	AK171051|Chd7|320790|chromodomain helicase DNA binding protein 7	NM_001081417|Chd7|320790|chromodomain helicase DNA binding protein 7
mm9_v1_chr2_+_92061718_92061757	0.188132	HOX{A6,A7,B6,B7}.p2	NM_001109690|Phf21a|192285|PHD finger protein 21A	AK137085|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr19_-_7557553_7557640	0.188102	HOX{A6,A7,B6,B7}.p2	AY507126|Rtn3|20168|reticulon 3	AK146505|Rtn3|20168|reticulon 3
mm9_v1_chr16_-_84831712_84831743	0.188067	HOX{A6,A7,B6,B7}.p2	U77128|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm9_v1_chr5_-_149995789_149995819	0.187935	HOX{A6,A7,B6,B7}.p2	AK017599|5730422E09Rik|433966|RIKEN cDNA 5730422E09 gene
mm9_v1_chr3_+_96363312_96363547	0.18789	HOX{A6,A7,B6,B7}.p2	AK217452|Txnip|56338|thioredoxin interacting protein	AK219290|Txnip|56338|thioredoxin interacting protein	AK200630|Txnip|56338|thioredoxin interacting protein
mm9_v1_chr5_+_31167731_31167889	0.187877	HOX{A6,A7,B6,B7}.p2	AK210919|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr10_-_14425271_14425365	0.187357	HOX{A6,A7,B6,B7}.p2	AK009227|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	BC026752|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK002611|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	NM_025418|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK003213|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK004323|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)
mm9_v1_chr18_+_22503589_22503589	0.187326	HOX{A6,A7,B6,B7}.p2	AK082659|Asxl3|211961|additional sex combs like 3 (Drosophila)	NM_001167777|Asxl3|211961|additional sex combs like 3 (Drosophila)
mm9_v1_chr1_+_187251960_187252031	0.1872	HOX{A6,A7,B6,B7}.p2	AK166460|Eprs|107508|glutamyl-prolyl-tRNA synthetase
mm9_v1_chr1_+_45852310_45852408	0.187161	HOX{A6,A7,B6,B7}.p2	BC085177|Wdr75|73674|WD repeat domain 75	BC117880|Wdr75|73674|WD repeat domain 75	BC117881|Wdr75|73674|WD repeat domain 75	AK010772|Wdr75|73674|WD repeat domain 75	AK152412|Wdr75|73674|WD repeat domain 75	AK168163|Wdr75|73674|WD repeat domain 75	NM_028599|Wdr75|73674|WD repeat domain 75	AK169932|Wdr75|73674|WD repeat domain 75	AK168032|Wdr75|73674|WD repeat domain 75	AK163221|Wdr75|73674|WD repeat domain 75	AK199189|Wdr75|73674|WD repeat domain 75	AK207424|Wdr75|73674|WD repeat domain 75
mm9_v1_chr12_-_86621317_86621389	0.186868	HOX{A6,A7,B6,B7}.p2	AK018832|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC116781|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC116783|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC096417|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC061088|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	AK007244|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	AK027969|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	AK004176|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	NM_025421|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type
mm9_v1_chr15_-_36538484_36538485	0.186837	HOX{A6,A7,B6,B7}.p2	BC011207|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr7_+_29606244_29606259	0.18642	HOX{A6,A7,B6,B7}.p2	AK006480|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L
mm9_v1_chr4_+_43419445_43419451	0.186243	HOX{A6,A7,B6,B7}.p2	AK132170|Rusc2|100213|RUN and SH3 domain containing 2	NM_199057|Rusc2|100213|RUN and SH3 domain containing 2	AK122263|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr2_+_167802175_167802258	0.186055	HOX{A6,A7,B6,B7}.p2	AK179877|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr9_+_44048756_44048763	0.186012	HOX{A6,A7,B6,B7}.p2	NM_001081369|Ccdc153|270150|coiled-coil domain containing 153
mm9_v1_chr13_+_55802874_55802961	0.185878	HOX{A6,A7,B6,B7}.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr2_-_70893583_70893669	0.184785	HOX{A6,A7,B6,B7}.p2	BC004636|Mettl8|228019|methyltransferase like 8	AK087927|Mettl8|228019|methyltransferase like 8	BC057960|Mettl8|228019|methyltransferase like 8	AK039461|Mettl8|228019|methyltransferase like 8	AK042669|Mettl8|228019|methyltransferase like 8	DQ093357|Mettl8|228019|methyltransferase like 8	DQ093358|Mettl8|228019|methyltransferase like 8	NM_145524|Mettl8|228019|methyltransferase like 8
mm9_v1_chr5_-_121835619_121835649	0.184734	HOX{A6,A7,B6,B7}.p2	NM_001163470|Trafd1|231712|TRAF type zinc finger domain containing 1	NM_172275|Trafd1|231712|TRAF type zinc finger domain containing 1
mm9_v1_chr2_+_177927788_177927833	0.184701	HOX{A6,A7,B6,B7}.p2	AJ632222|Phactr3|74189|phosphatase and actin regulator 3	NM_001007154|Phactr3|74189|phosphatase and actin regulator 3	AK038449|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr16_-_19983049_19983121	0.184591	HOX{A6,A7,B6,B7}.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr4_+_149022266_149022381	0.184564	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_-_101947088_101947134	0.184533	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_-_23197156_23197163	0.184367	HOX{A6,A7,B6,B7}.p2	BC056377|Nol4|319211|nucleolar protein 4	NM_001161483|Nol4|319211|nucleolar protein 4
mm9_v1_chr6_+_83299439_83299497	0.183965	HOX{A6,A7,B6,B7}.p2	BC116947|Bola3|78653|bolA-like 3 (E. coli)	BC116949|Bola3|78653|bolA-like 3 (E. coli)	AK131950|Bola3|78653|bolA-like 3 (E. coli)	AK160488|Bola3|78653|bolA-like 3 (E. coli)	AK028102|Bola3|78653|bolA-like 3 (E. coli)	NM_175277|Bola3|78653|bolA-like 3 (E. coli)
mm9_v1_chr4_-_147818818_147818893	0.183942	HOX{A6,A7,B6,B7}.p2	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr14_+_58417049_58417112	0.183497	HOX{A6,A7,B6,B7}.p2	AK144904|Sap18|20220|Sin3-associated polypeptide 18	AK146928|Sap18|20220|Sin3-associated polypeptide 18	NM_001142441|Gm10094|100041953|predicted gene 10094	BC006625|Sap18|20220|Sin3-associated polypeptide 18	AK006647|Sap18|20220|Sin3-associated polypeptide 18	AK085992|Sap18|20220|Sin3-associated polypeptide 18	Z97062|Sap18|20220|Sin3-associated polypeptide 18	BC099480|Sap18|20220|Sin3-associated polypeptide 18	AK133619|Sap18|20220|Sin3-associated polypeptide 18	AK005189|Sap18|20220|Sin3-associated polypeptide 18
mm9_v1_chr5_-_51945054_51945159	0.182645	HOX{A6,A7,B6,B7}.p2	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr9_+_114624257_114624316	0.182599	HOX{A6,A7,B6,B7}.p2	AK205150|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	AK217382|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1
mm9_v1_chr17_-_14831095_14831102	0.181864	HOX{A6,A7,B6,B7}.p2	L07803|Thbs2|21826|thrombospondin 2	M64866|Thbs2|21826|thrombospondin 2	AK132508|Thbs2|21826|thrombospondin 2
mm9_v1_chr19_-_60842585_60842735	0.180475	HOX{A6,A7,B6,B7}.p2	BC169258|Eif3a|13669|eukaryotic translation initiation factor 3, subunit A
mm9_v1_chr19_+_45635070_45635130	0.180457	HOX{A6,A7,B6,B7}.p2	BC027559|Dpcd|226162|deleted in primary ciliary dyskinesia	AK077347|Dpcd|226162|deleted in primary ciliary dyskinesia	NM_172639|Dpcd|226162|deleted in primary ciliary dyskinesia
mm9_v1_chr2_-_156817751_156817861	0.180456	HOX{A6,A7,B6,B7}.p2	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr15_+_59205752_59205871	0.180434	HOX{A6,A7,B6,B7}.p2	NM_001164604|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	NM_026746|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK003685|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK051277|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	BC009125|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK188685|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK211545|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK212165|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)
mm9_v1_chr8_+_112465553_112465555	0.179811	HOX{A6,A7,B6,B7}.p2	AK146878|Phlpp2|244650|PH domain and leucine rich repeat protein phosphatase 2
mm9_v1_chr17_+_38040466_38040492	0.179741	HOX{A6,A7,B6,B7}.p2	BC132433|Olfr127|258374|olfactory receptor 127	BC145997|Olfr127|258374|olfactory receptor 127	NM_146377|Olfr127|258374|olfactory receptor 127
mm9_v1_chr14_+_55502291_55502313	0.179701	HOX{A6,A7,B6,B7}.p2	AK015644|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr8_-_48374755_48374779	0.1797	HOX{A6,A7,B6,B7}.p2	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr19_-_6235784_6235886	0.179351	HOX{A6,A7,B6,B7}.p2	AK171041|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK155872|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK171178|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	NM_198168|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK034167|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK171430|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform
mm9_v1_chr5_-_31505192_31505291	0.178504	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_90910439_90910494	0.178186	HOX{A6,A7,B6,B7}.p2	BC100463|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr2_-_153051118_153051176	0.178059	HOX{A6,A7,B6,B7}.p2	BC058340|Tspyl3|241732|TSPY-like 3	AK148882|Tspyl3|241732|TSPY-like 3	AK167722|Tspyl3|241732|TSPY-like 3	AK134522|Tspyl3|241732|TSPY-like 3	NM_198617|Tspyl3|241732|TSPY-like 3
mm9_v1_chr16_+_10488270_10488391	0.178025	HOX{A6,A7,B6,B7}.p2	AK040723|Ciita|12265|class II transactivator	AK155184|Ciita|12265|class II transactivator	AF042158|Ciita|12265|class II transactivator	AK153609|Ciita|12265|class II transactivator	NM_007575|Ciita|12265|class II transactivator	U60653|Ciita|12265|class II transactivator	BC107330|Ciita|12265|class II transactivator	BC107331|Ciita|12265|class II transactivator
mm9_v1_chr17_-_45707285_45707350	0.177712	HOX{A6,A7,B6,B7}.p2	U89426|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr13_-_30077931_30077931	0.177697	HOX{A6,A7,B6,B7}.p2	AK133828|E2f3|13557|E2F transcription factor 3	NM_010093|E2f3|13557|E2F transcription factor 3
mm9_v1_chr12_-_77811533_77811533	0.177561	HOX{A6,A7,B6,B7}.p2	AK147299|Spnb1|20741|spectrin beta 1	NM_013675|Spnb1|20741|spectrin beta 1
mm9_v1_chr10_-_75243786_75243866	0.177321	HOX{A6,A7,B6,B7}.p2	BC003903|Gstt3|103140|glutathione S-transferase, theta 3	AK168226|Gstt3|103140|glutathione S-transferase, theta 3	AK138669|Gstt3|103140|glutathione S-transferase, theta 3	AK154161|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr14_-_103482076_103482219	0.177241	HOX{A6,A7,B6,B7}.p2	AK083561|Fbxl3|50789|F-box and leucine-rich repeat protein 3
mm9_v1_chrX_-_98615096_98615252	0.176399	HOX{A6,A7,B6,B7}.p2	BC042699|Zmym3|56364|zinc finger, MYM-type 3	BC050131|Zmym3|56364|zinc finger, MYM-type 3	AK033470|Zmym3|56364|zinc finger, MYM-type 3	BC108366|Zmym3|56364|zinc finger, MYM-type 3	NM_001177985|Zmym3|56364|zinc finger, MYM-type 3	NM_001177986|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr5_-_123979739_123979846	0.176197	HOX{A6,A7,B6,B7}.p2	AK080345|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr4_-_47484780_47484977	0.17609	HOX{A6,A7,B6,B7}.p2	AK209601|Alg2|56737|asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase)	AK205116|Alg2|56737|asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase)
mm9_v1_chr7_+_134005485_134005523	0.176078	HOX{A6,A7,B6,B7}.p2	BC055687|Hirip3|233876|HIRA interacting protein 3	NM_172746|Hirip3|233876|HIRA interacting protein 3
mm9_v1_chr14_-_21148150_21148160	0.175808	HOX{A6,A7,B6,B7}.p2	AK202761|Ecd|70601|ecdysoneless homolog (Drosophila)
mm9_v1_chr9_+_74885420_74885510	0.175598	HOX{A6,A7,B6,B7}.p2	NM_001142655|Arpp19|59046|cAMP-regulated phosphoprotein 19	AK076052|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chrX_+_131252542_131252558	0.175565	HOX{A6,A7,B6,B7}.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr2_+_174153230_174153414	0.175283	HOX{A6,A7,B6,B7}.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr9_+_95855159_95855287	0.174893	HOX{A6,A7,B6,B7}.p2	AK162932|Xrn1|24127|5'-3' exoribonuclease 1	NM_011916|Xrn1|24127|5'-3' exoribonuclease 1	X91617|Xrn1|24127|5'-3' exoribonuclease 1	AK142311|Xrn1|24127|5'-3' exoribonuclease 1	AK162848|Xrn1|24127|5'-3' exoribonuclease 1	AK163245|Xrn1|24127|5'-3' exoribonuclease 1	AK143400|Xrn1|24127|5'-3' exoribonuclease 1	BC054108|Xrn1|24127|5'-3' exoribonuclease 1	BC100578|Xrn1|24127|5'-3' exoribonuclease 1	D88026|Xrn1|24127|5'-3' exoribonuclease 1
mm9_v1_chr10_+_126817878_126817965	0.174562	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_-_147022623_147022691	0.173674	HOX{A6,A7,B6,B7}.p2	BC026769|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK040145|Apex2|77622|apurinic/apyrimidinic endonuclease 2	BC053107|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK088918|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK081677|Apex2|77622|apurinic/apyrimidinic endonuclease 2	BC078633|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK050858|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK021248|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK033489|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AB072498|Apex2|77622|apurinic/apyrimidinic endonuclease 2	NM_029943|Apex2|77622|apurinic/apyrimidinic endonuclease 2
mm9_v1_chr5_-_122026484_122026578	0.173396	HOX{A6,A7,B6,B7}.p2	AK210785|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr3_+_60305108_60305212	0.173372	HOX{A6,A7,B6,B7}.p2	AK162039|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK149405|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AB093240|Mbnl1|56758|muscleblind-like 1 (Drosophila)	NM_020007|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK088871|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK153848|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC060031|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC096600|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr6_-_57485419_57485488	0.173293	HOX{A6,A7,B6,B7}.p2	BC092238|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	NM_175523|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	AK044610|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)
mm9_v1_chr7_+_104991480_104991524	0.172634	HOX{A6,A7,B6,B7}.p2	AK077497|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC145698|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr16_-_5031999_5032052	0.172047	HOX{A6,A7,B6,B7}.p2	AK188170|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)
mm9_v1_chr6_+_28430311_28430460	0.171911	HOX{A6,A7,B6,B7}.p2	AK133837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	NM_019776|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK167576|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK159837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK088028|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK161591|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AB021491|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK034914|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK162432|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	BC007126|Snd1|56463|staphylococcal nuclease and tudor domain containing 1
mm9_v1_chr5_+_130845319_130845359	0.171709	HOX{A6,A7,B6,B7}.p2	NM_181045|Caln1|140904|calneuron 1	AF282251|Caln1|140904|calneuron 1	AK035865|Caln1|140904|calneuron 1
mm9_v1_chr4_+_3502021_3502156	0.171617	HOX{A6,A7,B6,B7}.p2	BC058183|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK044895|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	NM_054089|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK030953|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	BC075728|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK050044|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK170949|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AF389908|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)
mm9_v1_chr12_-_99812921_99812948	0.171333	HOX{A6,A7,B6,B7}.p2	AK019376|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr15_+_82000246_82000509	0.170977	HOX{A6,A7,B6,B7}.p2	BC023333|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr13_+_12487614_12487700	0.170842	HOX{A6,A7,B6,B7}.p2	AK087792|Heatr1|217995|HEAT repeat containing 1	AK165890|Heatr1|217995|HEAT repeat containing 1	NM_144835|Heatr1|217995|HEAT repeat containing 1	AK044969|Heatr1|217995|HEAT repeat containing 1	AK172508|Heatr1|217995|HEAT repeat containing 1	AK143958|Heatr1|217995|HEAT repeat containing 1	AK163223|Heatr1|217995|HEAT repeat containing 1	AK165368|Heatr1|217995|HEAT repeat containing 1
mm9_v1_chr10_+_69667423_69667431	0.170806	HOX{A6,A7,B6,B7}.p2	AK009351|2310015B20Rik|69563|RIKEN cDNA 2310015B20 gene
mm9_v1_chrX_+_20276894_20276951	0.170326	HOX{A6,A7,B6,B7}.p2	AK191787|Cdk16|18555|cyclin-dependent kinase 16	AK206138|Cdk16|18555|cyclin-dependent kinase 16	AK208421|Cdk16|18555|cyclin-dependent kinase 16	AK215824|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr11_-_83276417_83276531	0.170221	HOX{A6,A7,B6,B7}.p2	BC137921|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	BC145048|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	BC145049|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	AY065653|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	AY071828|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	AY071829|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	NM_080453|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	NM_172797|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	AK087705|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	AK151100|Mmp28|118453|matrix metallopeptidase 28 (epilysin)	AK051258|Mmp28|118453|matrix metallopeptidase 28 (epilysin)
mm9_v1_chr11_+_3584631_3584687	0.17016	HOX{A6,A7,B6,B7}.p2	AK018377|Morc2a|74522|microrchidia 2A
mm9_v1_chr8_+_87213145_87213176	0.170131	HOX{A6,A7,B6,B7}.p2	NM_001164559|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_001164560|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_198020|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	BC027404|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr1_-_74590801_74590859	0.169925	HOX{A6,A7,B6,B7}.p2	BC139091|Usp37|319651|ubiquitin specific peptidase 37	AK133317|Usp37|319651|ubiquitin specific peptidase 37	AK030013|Usp37|319651|ubiquitin specific peptidase 37	NM_176972|Usp37|319651|ubiquitin specific peptidase 37
mm9_v1_chr15_-_37909575_37909591	0.169877	HOX{A6,A7,B6,B7}.p2	BC064751|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chr4_+_21774729_21774865	0.169559	HOX{A6,A7,B6,B7}.p2	NM_025669|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC141031|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr11_+_75300278_75300323	0.169507	HOX{A6,A7,B6,B7}.p2	NM_138659|Prpf8|192159|pre-mRNA processing factor 8	AK041017|Prpf8|192159|pre-mRNA processing factor 8
mm9_v1_chr9_-_34983552_34983647	0.169473	HOX{A6,A7,B6,B7}.p2	AK171018|Dcps|69305|decapping enzyme, scavenger	AK005584|Dcps|69305|decapping enzyme, scavenger	NM_027030|Dcps|69305|decapping enzyme, scavenger	AY040775|Dcps|69305|decapping enzyme, scavenger	AK169641|Dcps|69305|decapping enzyme, scavenger	BC016273|Dcps|69305|decapping enzyme, scavenger	AK078253|Dcps|69305|decapping enzyme, scavenger
mm9_v1_chr4_-_154338457_154338490	0.16925	HOX{A6,A7,B6,B7}.p2	AK146114|Pank4|269614|pantothenate kinase 4
mm9_v1_chr7_-_125629996_125630002	0.169152	HOX{A6,A7,B6,B7}.p2	AK164927|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK081844|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr6_-_50406080_50406168	0.169103	HOX{A6,A7,B6,B7}.p2	BC086485|Osbpl3|71720|oxysterol binding protein-like 3	AK160310|Osbpl3|71720|oxysterol binding protein-like 3	NM_001163645|Osbpl3|71720|oxysterol binding protein-like 3
mm9_v1_chr3_+_85888818_85888835	0.168825	HOX{A6,A7,B6,B7}.p2	BC028254|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chrX_+_98624989_98625073	0.168578	HOX{A6,A7,B6,B7}.p2	NM_023144|Nono|53610|non-POU-domain-containing, octamer binding protein	AK161152|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169303|Nono|53610|non-POU-domain-containing, octamer binding protein	AK145179|Nono|53610|non-POU-domain-containing, octamer binding protein	AK028338|Nono|53610|non-POU-domain-containing, octamer binding protein	AK004830|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169202|Nono|53610|non-POU-domain-containing, octamer binding protein	AK165855|Nono|53610|non-POU-domain-containing, octamer binding protein	BC005465|Nono|53610|non-POU-domain-containing, octamer binding protein	S64860|Nono|53610|non-POU-domain-containing, octamer binding protein	AK167297|Nono|53610|non-POU-domain-containing, octamer binding protein	AK033201|Nono|53610|non-POU-domain-containing, octamer binding protein	AK013444|Nono|53610|non-POU-domain-containing, octamer binding protein
mm9_v1_chr4_+_149022081_149022141	0.168431	HOX{A6,A7,B6,B7}.p2	AK007691|Clstn1|65945|calsyntenin 1
mm9_v1_chr18_+_52775568_52775635	0.168184	HOX{A6,A7,B6,B7}.p2	AK016749|Zfp474|66758|zinc finger protein 474	NM_025749|Zfp474|66758|zinc finger protein 474	BC055099|Zfp474|66758|zinc finger protein 474	AY350709|Zfp474|66758|zinc finger protein 474
mm9_v1_chr3_-_146444377_146444386	0.167978	HOX{A6,A7,B6,B7}.p2	AK150122|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK150134|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164200|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr10_+_85811980_85812061	0.167835	HOX{A6,A7,B6,B7}.p2	Z31358|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr2_+_58419708_58419797	0.167759	HOX{A6,A7,B6,B7}.p2	AK087904|Upp2|76654|uridine phosphorylase 2	AK161816|Upp2|76654|uridine phosphorylase 2	AK044005|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr5_+_77020738_77020827	0.167603	HOX{A6,A7,B6,B7}.p2	BC062951|Cep135|381644|centrosomal protein 135	NM_199032|Cep135|381644|centrosomal protein 135	AK172988|Cep135|381644|centrosomal protein 135
mm9_v1_chr19_+_12284057_12284057	0.16753	HOX{A6,A7,B6,B7}.p2	BC133710|Olfr1431|258409|olfactory receptor 1431	NM_146414|Olfr1431|258409|olfactory receptor 1431
mm9_v1_chr2_-_92227752_92227789	0.167435	HOX{A6,A7,B6,B7}.p2	AK218579|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1
mm9_v1_chr14_+_34767188_34767245	0.167308	HOX{A6,A7,B6,B7}.p2	BC083133|Rbp3|19661|retinol binding protein 3, interstitial	BC017610|Rbp3|19661|retinol binding protein 3, interstitial	NM_015745|Rbp3|19661|retinol binding protein 3, interstitial	BC040282|Rbp3|19661|retinol binding protein 3, interstitial	BC042480|Rbp3|19661|retinol binding protein 3, interstitial
mm9_v1_chr12_+_101447413_101447431	0.167182	HOX{A6,A7,B6,B7}.p2	BC048752|Calm1|12313|calmodulin 1
mm9_v1_chr11_-_79343891_79344047	0.167097	HOX{A6,A7,B6,B7}.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr3_-_30799013_30799120	0.166782	HOX{A6,A7,B6,B7}.p2	AK050678|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr5_+_104864168_104864178	0.166711	HOX{A6,A7,B6,B7}.p2	AK151069|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr7_+_101191200_101191360	0.166066	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_151458256_151458277	0.165726	HOX{A6,A7,B6,B7}.p2	AK032279|Snph|241727|syntaphilin	AK122262|Snph|241727|syntaphilin	NM_198214|Snph|241727|syntaphilin
mm9_v1_chr4_+_144483110_144483188	0.165631	HOX{A6,A7,B6,B7}.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr6_-_39369941_39369948	0.165082	HOX{A6,A7,B6,B7}.p2	AK005137|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr6_+_38383834_38383834	0.164931	HOX{A6,A7,B6,B7}.p2	AK031359|Ubn2|320538|ubinuclein 2
mm9_v1_chrX_-_45561726_45561881	0.164845	HOX{A6,A7,B6,B7}.p2	BC042618|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK035745|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK079248|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032252|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032233|Zdhhc9|208884|zinc finger, DHHC domain containing 9	NM_172465|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr1_-_184271729_184271762	0.164551	HOX{A6,A7,B6,B7}.p2	BC094542|Fbxo28|67948|F-box protein 28	NM_175127|Fbxo28|67948|F-box protein 28	AK076211|Fbxo28|67948|F-box protein 28	AK077653|Fbxo28|67948|F-box protein 28
mm9_v1_chr15_+_3976427_3976447	0.16446	HOX{A6,A7,B6,B7}.p2	AK078086|Oxct1|67041|3-oxoacid CoA transferase 1	NM_024188|Oxct1|67041|3-oxoacid CoA transferase 1
mm9_v1_chr2_+_30271550_30271576	0.164456	HOX{A6,A7,B6,B7}.p2	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr8_-_113917651_113917728	0.164311	HOX{A6,A7,B6,B7}.p2	AY660882|Fa2h|338521|fatty acid 2-hydroxylase	BC046985|Fa2h|338521|fatty acid 2-hydroxylase	BC111912|Fa2h|338521|fatty acid 2-hydroxylase	BC128080|Fa2h|338521|fatty acid 2-hydroxylase	BC128081|Fa2h|338521|fatty acid 2-hydroxylase	AK090338|Fa2h|338521|fatty acid 2-hydroxylase	AK033736|Fa2h|338521|fatty acid 2-hydroxylase	AK161502|Fa2h|338521|fatty acid 2-hydroxylase	NM_178086|Fa2h|338521|fatty acid 2-hydroxylase
mm9_v1_chr17_-_35286889_35287021	0.164218	HOX{A6,A7,B6,B7}.p2	AK204617|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr8_+_108703001_108703015	0.164064	HOX{A6,A7,B6,B7}.p2	BC038404|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr10_-_128258639_128258702	0.163942	HOX{A6,A7,B6,B7}.p2	AK002824|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK002583|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK013455|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	BC002146|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	NM_024180|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)
mm9_v1_chr5_-_121822213_121822316	0.163756	HOX{A6,A7,B6,B7}.p2	AK211451|Trafd1|231712|TRAF type zinc finger domain containing 1	AK212088|Trafd1|231712|TRAF type zinc finger domain containing 1
mm9_v1_chr16_+_20672770_20672837	0.163715	HOX{A6,A7,B6,B7}.p2	AK081982|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_001005331|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_145941|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr15_+_59162396_59162483	0.163583	HOX{A6,A7,B6,B7}.p2	AK190780|Sqle|20775|squalene epoxidase	AK217980|Sqle|20775|squalene epoxidase
mm9_v1_chr10_+_28388165_28388438	0.163231	HOX{A6,A7,B6,B7}.p2	AK041386|Themis|210757|thymocyte selection associated	AK088136|Themis|210757|thymocyte selection associated	AK089077|Themis|210757|thymocyte selection associated	NM_178666|Themis|210757|thymocyte selection associated	AK040594|Themis|210757|thymocyte selection associated	AK041622|Themis|210757|thymocyte selection associated	AK138701|Themis|210757|thymocyte selection associated	AK041562|Themis|210757|thymocyte selection associated	BC125486|Themis|210757|thymocyte selection associated	BC125488|Themis|210757|thymocyte selection associated	AB509340|Themis|210757|thymocyte selection associated	AK169558|Themis|210757|thymocyte selection associated
mm9_v1_chr10_-_33343965_33344073	0.163195	HOX{A6,A7,B6,B7}.p2	AK049896|Clvs2|215890|clavesin 2	AK049988|Clvs2|215890|clavesin 2
mm9_v1_chr19_+_46402673_46402698	0.163164	HOX{A6,A7,B6,B7}.p2	NM_133694|Fbxl15|68431|F-box and leucine-rich repeat protein 15	AK172339|Fbxl15|68431|F-box and leucine-rich repeat protein 15	BC016499|Fbxl15|68431|F-box and leucine-rich repeat protein 15
mm9_v1_chr9_-_119835967_119836242	0.162988	HOX{A6,A7,B6,B7}.p2	AK198424|Gorasp1|74498|golgi reassembly stacking protein 1	AK209806|Gorasp1|74498|golgi reassembly stacking protein 1	AK213744|Gorasp1|74498|golgi reassembly stacking protein 1	AK204247|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr14_-_52899101_52899219	0.162964	HOX{A6,A7,B6,B7}.p2	AK160249|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr7_+_53651811_53651938	0.162898	HOX{A6,A7,B6,B7}.p2	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr15_+_35301320_35301357	0.162873	HOX{A6,A7,B6,B7}.p2	BC158052|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr14_+_51715674_51715674	0.162834	HOX{A6,A7,B6,B7}.p2	AK159966|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_007447|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_201239|Rnase4|58809|ribonuclease, RNase A family 4
mm9_v1_chr15_+_4003731_4003740	0.162258	HOX{A6,A7,B6,B7}.p2	AK181182|Oxct1|67041|3-oxoacid CoA transferase 1	AK181314|Oxct1|67041|3-oxoacid CoA transferase 1	AK184597|Oxct1|67041|3-oxoacid CoA transferase 1	AK185295|Oxct1|67041|3-oxoacid CoA transferase 1
mm9_v1_chr7_+_71646515_71646591	0.162197	HOX{A6,A7,B6,B7}.p2	BC057620|Apba2|11784|amyloid beta (A4) precursor protein-binding, family A, member 2	NM_007461|Apba2|11784|amyloid beta (A4) precursor protein-binding, family A, member 2
mm9_v1_chr1_-_121545442_121545576	0.161863	HOX{A6,A7,B6,B7}.p2	AK034676|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK047523|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK173198|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	BC011476|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044959|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044996|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK079301|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK161141|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK027983|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK037024|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK136125|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK040354|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK167449|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_001113416|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_145506|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr6_+_129483154_129483185	0.16135	HOX{A6,A7,B6,B7}.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr10_+_80644982_80645055	0.161333	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_94515034_94515062	0.160982	HOX{A6,A7,B6,B7}.p2	BC089459|Eme1|268465|essential meiotic endonuclease 1 homolog 1 (S. pombe)
mm9_v1_chr15_-_81702298_81702350	0.160627	HOX{A6,A7,B6,B7}.p2	AK163247|Phf5a|68479|PHD finger protein 5A	AK143590|Phf5a|68479|PHD finger protein 5A	NM_026737|Phf5a|68479|PHD finger protein 5A	AK167955|Phf5a|68479|PHD finger protein 5A	BC025161|Phf5a|68479|PHD finger protein 5A	AK003520|Phf5a|68479|PHD finger protein 5A	AF479288|Phf5a|68479|PHD finger protein 5A	AK167932|Phf5a|68479|PHD finger protein 5A
mm9_v1_chr16_-_44111760_44111776	0.160429	HOX{A6,A7,B6,B7}.p2	AK216026|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A
mm9_v1_chr16_-_91069378_91069389	0.16033	HOX{A6,A7,B6,B7}.p2	AK035767|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	AK043035|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	AK016554|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	NM_001163695|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	NM_028905|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene
mm9_v1_chr3_+_84470230_84470299	0.160294	HOX{A6,A7,B6,B7}.p2	BC096432|Tmem154|320782|transmembrane protein 154	AK170385|Tmem154|320782|transmembrane protein 154	AK170665|Tmem154|320782|transmembrane protein 154	AK170626|Tmem154|320782|transmembrane protein 154
mm9_v1_chrY_+_347036_347061	0.160209	HOX{A6,A7,B6,B7}.p2	AK012186|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK153974|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK009448|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AJ006584|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC043656|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	NM_012011|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC031450|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm9_v1_chrX_+_68617918_68617964	0.159554	HOX{A6,A7,B6,B7}.p2	BC056376|Mtmr1|53332|myotubularin related protein 1	NM_016985|Mtmr1|53332|myotubularin related protein 1	BC057337|Mtmr1|53332|myotubularin related protein 1	AF073997|Mtmr1|53332|myotubularin related protein 1
mm9_v1_chr11_+_109334649_109334687	0.159453	HOX{A6,A7,B6,B7}.p2	AK158726|Arsg|74008|arylsulfatase G	NM_028710|Arsg|74008|arylsulfatase G
mm9_v1_chr10_-_53795485_53795553	0.159421	HOX{A6,A7,B6,B7}.p2	AK186378|Man1a|17155|mannosidase 1, alpha	BC015265|Man1a|17155|mannosidase 1, alpha	AK028996|Man1a|17155|mannosidase 1, alpha	AK042371|Man1a|17155|mannosidase 1, alpha	AK148407|Man1a|17155|mannosidase 1, alpha	AK154820|Man1a|17155|mannosidase 1, alpha	AK171841|Man1a|17155|mannosidase 1, alpha	AK043932|Man1a|17155|mannosidase 1, alpha	AK172376|Man1a|17155|mannosidase 1, alpha	AK172667|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr17_-_57150708_57150759	0.158996	HOX{A6,A7,B6,B7}.p2	BC003336|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	BC023081|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	NM_133801|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168236|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168243|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK013002|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK078048|Gtf2f1|98053|general transcription factor IIF, polypeptide 1
mm9_v1_chr5_+_130292873_130292891	0.158808	HOX{A6,A7,B6,B7}.p2	AK149757|Cct6a|12466|chaperonin containing Tcp1, subunit 6a (zeta)
mm9_v1_chr6_+_91634056_91634194	0.158437	HOX{A6,A7,B6,B7}.p2	NM_009320|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK041141|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	L03292|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK143510|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK162776|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC015245|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm9_v1_chr11_-_4987973_4988127	0.158324	HOX{A6,A7,B6,B7}.p2	AK178351|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr5_-_24606422_24606505	0.157997	HOX{A6,A7,B6,B7}.p2	AK154296|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_145401|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr1_-_178143971_178144072	0.157661	HOX{A6,A7,B6,B7}.p2	AK082725|Pld5|319455|phospholipase D family, member 5	NM_001195816|Pld5|319455|phospholipase D family, member 5
mm9_v1_chr9_-_75238110_75238135	0.157318	HOX{A6,A7,B6,B7}.p2	BC024684|Mapk6|50772|mitogen-activated protein kinase 6
mm9_v1_chr2_+_35992148_35992200	0.156999	HOX{A6,A7,B6,B7}.p2	BC019787|Mrrf|67871|mitochondrial ribosome recycling factor	AK010018|Mrrf|67871|mitochondrial ribosome recycling factor
mm9_v1_chr16_-_21947543_21947585	0.156733	HOX{A6,A7,B6,B7}.p2	AK160292|Tmem41a|66664|transmembrane protein 41a	BC019770|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr3_-_10208575_10208582	0.156368	HOX{A6,A7,B6,B7}.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr9_-_112090150_112090479	0.156214	HOX{A6,A7,B6,B7}.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr3_+_105508375_105508375	0.155626	HOX{A6,A7,B6,B7}.p2	AK078368|6530418L21Rik|109050|RIKEN cDNA 6530418L21 gene	NM_001163356|6530418L21Rik|109050|RIKEN cDNA 6530418L21 gene
mm9_v1_chr16_+_13829111_13829121	0.155579	HOX{A6,A7,B6,B7}.p2	AK207258|Ntan1|18203|N-terminal Asn amidase
mm9_v1_chrX_+_20037652_20037652	0.155436	HOX{A6,A7,B6,B7}.p2	BC130270|Phf16|382207|PHD finger protein 16	NM_199317|Phf16|382207|PHD finger protein 16
mm9_v1_chr19_+_6298813_6298952	0.155375	HOX{A6,A7,B6,B7}.p2	AK192505|Ehd1|13660|EH-domain containing 1	AK196160|Ehd1|13660|EH-domain containing 1	AK218303|Ehd1|13660|EH-domain containing 1	AK186304|Ehd1|13660|EH-domain containing 1	AK209033|Ehd1|13660|EH-domain containing 1
mm9_v1_chr17_-_30024821_30024837	0.155375	HOX{A6,A7,B6,B7}.p2	NM_001081160|Mdga1|74762|MAM domain containing glycosylphosphatidylinositol anchor 1
mm9_v1_chr18_+_52927574_52927797	0.155312	HOX{A6,A7,B6,B7}.p2	BC130225|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	BC152544|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	AK160111|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	AF348447|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	AK046597|Gm5078|320291|predicted gene 5078	BC098489|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	AK044974|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	AK081942|Sncaip|67847|synuclein, alpha interacting protein (synphilin)
mm9_v1_chr14_+_75530926_75530966	0.155103	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_91263809_91263809	0.15469	HOX{A6,A7,B6,B7}.p2	AK046913|Zic4|22774|zinc finger protein of the cerebellum 4	NM_009576|Zic4|22774|zinc finger protein of the cerebellum 4
mm9_v1_chr4_-_151665770_151665770	0.154689	HOX{A6,A7,B6,B7}.p2	AK090218|Hes3|15207|hairy and enhancer of split 3 (Drosophila)	NM_008237|Hes3|15207|hairy and enhancer of split 3 (Drosophila)
mm9_v1_chrX_+_136219606_136219671	0.154295	HOX{A6,A7,B6,B7}.p2	BC147581|Tbc1d8b|245638|TBC1 domain family, member 8B	BC151057|Tbc1d8b|245638|TBC1 domain family, member 8B
mm9_v1_chr6_+_116214268_116214278	0.154247	HOX{A6,A7,B6,B7}.p2	BC048508|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)
mm9_v1_chr4_-_101028734_101028813	0.15415	HOX{A6,A7,B6,B7}.p2	AK021368|E130102H24Rik|77866|RIKEN cDNA E130102H24 gene
mm9_v1_chr11_+_121282686_121282751	0.153938	HOX{A6,A7,B6,B7}.p2	NM_181420|Fn3krp|238024|fructosamine 3 kinase related protein	AY360466|Fn3krp|238024|fructosamine 3 kinase related protein	AK034934|Fn3krp|238024|fructosamine 3 kinase related protein	BC032265|Fn3krp|238024|fructosamine 3 kinase related protein
mm9_v1_chr15_+_36103768_36103779	0.153877	HOX{A6,A7,B6,B7}.p2	NM_001039368|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	NM_023127|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chr16_+_92086695_92086827	0.153731	HOX{A6,A7,B6,B7}.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr12_-_52847096_52847142	0.153583	HOX{A6,A7,B6,B7}.p2	BC010205|Hectd1|207304|HECT domain containing 1
mm9_v1_chr12_-_74387687_74387697	0.153494	HOX{A6,A7,B6,B7}.p2	BC012521|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	AK049127|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	AK011576|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	NM_029580|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)
mm9_v1_chr12_+_50484907_50484951	0.153478	HOX{A6,A7,B6,B7}.p2	BC064449|Foxg1|15228|forkhead box G1
mm9_v1_chr8_-_114516147_114516201	0.153206	HOX{A6,A7,B6,B7}.p2	BC019976|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK039699|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK161044|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK035614|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK082399|Adat1|30947|adenosine deaminase, tRNA-specific 1	NM_013925|Adat1|30947|adenosine deaminase, tRNA-specific 1
mm9_v1_chr10_-_6806261_6806284	0.153203	HOX{A6,A7,B6,B7}.p2	AK002363|Iyd|70337|iodotyrosine deiodinase	NM_027391|Iyd|70337|iodotyrosine deiodinase	BC023358|Iyd|70337|iodotyrosine deiodinase
mm9_v1_chr1_+_63223396_63223420	0.153134	HOX{A6,A7,B6,B7}.p2	NM_018796|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr18_+_37833939_37833988	0.153021	HOX{A6,A7,B6,B7}.p2	BC060691|Pcdhga3|93711|protocadherin gamma subfamily A, 3	NM_033586|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr10_-_114821533_114821571	0.152984	HOX{A6,A7,B6,B7}.p2	AK013630|Thap2|66816|THAP domain containing, apoptosis associated protein 2
mm9_v1_chr3_+_102975621_102975695	0.152844	HOX{A6,A7,B6,B7}.p2	NM_026602|Bcas2|68183|breast carcinoma amplified sequence 2	BC013627|Bcas2|68183|breast carcinoma amplified sequence 2	BC037062|Bcas2|68183|breast carcinoma amplified sequence 2	AK018786|Bcas2|68183|breast carcinoma amplified sequence 2	AK005825|Bcas2|68183|breast carcinoma amplified sequence 2	AK020098|Bcas2|68183|breast carcinoma amplified sequence 2	AK153513|Bcas2|68183|breast carcinoma amplified sequence 2	AK166967|Bcas2|68183|breast carcinoma amplified sequence 2	AY043239|Bcas2|68183|breast carcinoma amplified sequence 2	BC023382|Bcas2|68183|breast carcinoma amplified sequence 2
mm9_v1_chr2_-_32137306_32137330	0.152684	HOX{A6,A7,B6,B7}.p2	AB597965|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK216650|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene
mm9_v1_chr16_-_91011280_91011324	0.152456	HOX{A6,A7,B6,B7}.p2	AK020816|Synj1|104015|synaptojanin 1	AK080946|Synj1|104015|synaptojanin 1	AK049822|Synj1|104015|synaptojanin 1
mm9_v1_chr11_+_51912342_51912394	0.152261	HOX{A6,A7,B6,B7}.p2	BC003856|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	AK172644|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	AF076192|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	BC054458|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr6_-_149049906_149050060	0.152153	HOX{A6,A7,B6,B7}.p2	BC132199|Dennd5b|320560|DENN/MADD domain containing 5B	BC132535|Dennd5b|320560|DENN/MADD domain containing 5B	BC145128|Dennd5b|320560|DENN/MADD domain containing 5B	AK052296|Dennd5b|320560|DENN/MADD domain containing 5B	AK050728|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chrX_+_133357268_133357438	0.151851	HOX{A6,A7,B6,B7}.p2	AK160872|Plp1|18823|proteolipid protein (myelin) 1	AK134554|Plp1|18823|proteolipid protein (myelin) 1	M15442|Plp1|18823|proteolipid protein (myelin) 1	AK077564|Plp1|18823|proteolipid protein (myelin) 1	BC027010|Plp1|18823|proteolipid protein (myelin) 1	NM_011123|Plp1|18823|proteolipid protein (myelin) 1	AK192772|Plp1|18823|proteolipid protein (myelin) 1	AK203421|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr2_+_121134843_121134847	0.151618	HOX{A6,A7,B6,B7}.p2	AK018185|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr5_+_93112640_93112650	0.151588	HOX{A6,A7,B6,B7}.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr19_-_20465158_20465166	0.151363	HOX{A6,A7,B6,B7}.p2	AK167612|Anxa1|16952|annexin A1	AK171422|Anxa1|16952|annexin A1	NM_010730|Anxa1|16952|annexin A1	AK002681|Anxa1|16952|annexin A1	AK037064|Anxa1|16952|annexin A1	AK140838|Anxa1|16952|annexin A1	AK150564|Anxa1|16952|annexin A1	AK150718|Anxa1|16952|annexin A1	AK153156|Anxa1|16952|annexin A1	AK153490|Anxa1|16952|annexin A1	AK154568|Anxa1|16952|annexin A1	AK170612|Anxa1|16952|annexin A1	AK049455|Anxa1|16952|annexin A1
mm9_v1_chr4_-_41411865_41411961	0.151166	HOX{A6,A7,B6,B7}.p2	AK050683|Kif24|109242|kinesin family member 24	AK016916|Kif24|109242|kinesin family member 24	BC067395|Kif24|109242|kinesin family member 24	AK084967|Kif24|109242|kinesin family member 24	AK135307|Kif24|109242|kinesin family member 24	NM_024241|Kif24|109242|kinesin family member 24	AK020445|Kif24|109242|kinesin family member 24
mm9_v1_chr11_+_106124121_106124160	0.150871	HOX{A6,A7,B6,B7}.p2	AK189340|Psmc5|19184|protease (prosome, macropain) 26S subunit, ATPase 5
mm9_v1_chr1_+_74438182_74438368	0.150813	HOX{A6,A7,B6,B7}.p2	NM_153088|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AK089478|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC049184|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC058085|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr1_-_174128558_174128619	0.150745	HOX{A6,A7,B6,B7}.p2	BC092079|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr4_+_129497720_129497746	0.150381	HOX{A6,A7,B6,B7}.p2	NM_008974|Ptp4a2|19244|protein tyrosine phosphatase 4a2
mm9_v1_chr10_-_40602908_40602950	0.150322	HOX{A6,A7,B6,B7}.p2	AK004569|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK135411|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC061220|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK084140|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC147503|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC158078|Cdc40|71713|cell division cycle 40 homolog (yeast)	NM_027879|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr3_+_121656136_121656252	0.150088	HOX{A6,A7,B6,B7}.p2	BC040387|Arhgap29|214137|Rho GTPase activating protein 29	NM_172525|Arhgap29|214137|Rho GTPase activating protein 29
mm9_v1_chr11_+_67090625_67090855	0.150078	HOX{A6,A7,B6,B7}.p2	NM_177369|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021877|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021876|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	BC150737|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK029328|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK081482|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK087387|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AY963802|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021878|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal
mm9_v1_chr2_-_4544898_4544915	0.149972	HOX{A6,A7,B6,B7}.p2	BC019370|Prpf18|67229|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm9_v1_chr7_-_31337285_31337347	0.149939	HOX{A6,A7,B6,B7}.p2	BC053749|BC053749|333193|cDNA sequence BC053749	NM_183321|BC053749|333193|cDNA sequence BC053749	AK052345|BC053749|333193|cDNA sequence BC053749
mm9_v1_chr13_-_49748135_49748153	0.149547	HOX{A6,A7,B6,B7}.p2	AK076577|Cenpp|66336|centromere protein P	BC094280|Cenpp|66336|centromere protein P
mm9_v1_chr16_+_49868005_49868080	0.14937	HOX{A6,A7,B6,B7}.p2	BC009094|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr3_-_157689714_157689821	0.149221	HOX{A6,A7,B6,B7}.p2	AK218604|Srsf11|69207|serine/arginine-rich splicing factor 11	AK183815|Srsf11|69207|serine/arginine-rich splicing factor 11	AK183987|Srsf11|69207|serine/arginine-rich splicing factor 11	AK212592|Srsf11|69207|serine/arginine-rich splicing factor 11	AK215844|Srsf11|69207|serine/arginine-rich splicing factor 11	AK216204|Srsf11|69207|serine/arginine-rich splicing factor 11	AK218039|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr15_+_100701360_100701457	0.149164	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_55174719_55174759	0.149006	HOX{A6,A7,B6,B7}.p2	BC068128|AI118078|244886|expressed sequence AI118078	AK036040|AI118078|244886|expressed sequence AI118078	NM_172923|AI118078|244886|expressed sequence AI118078
mm9_v1_chr2_+_80193710_80193811	0.148988	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_54543121_54543160	0.148651	HOX{A6,A7,B6,B7}.p2	BC029109|Fkbp14|231997|FK506 binding protein 14	NM_153573|Fkbp14|231997|FK506 binding protein 14	BC034313|Fkbp14|231997|FK506 binding protein 14	AK081692|Fkbp14|231997|FK506 binding protein 14	AK044876|Fkbp14|231997|FK506 binding protein 14
mm9_v1_chr3_-_145770980_145771093	0.148445	HOX{A6,A7,B6,B7}.p2	AK029903|Wdr63|242253|WD repeat domain 63	NM_172864|Wdr63|242253|WD repeat domain 63	BC158119|Wdr63|242253|WD repeat domain 63
mm9_v1_chr9_+_72773456_72773456	0.148429	HOX{A6,A7,B6,B7}.p2	AK011208|Pygo1|72135|pygopus 1	NM_028116|Pygo1|72135|pygopus 1
mm9_v1_chr1_-_84931657_84931708	0.148425	HOX{A6,A7,B6,B7}.p2	BC023456|Slc16a14|71781|solute carrier family 16 (monocarboxylic acid transporters), member 14	NM_027921|Slc16a14|71781|solute carrier family 16 (monocarboxylic acid transporters), member 14	AK049846|Slc16a14|71781|solute carrier family 16 (monocarboxylic acid transporters), member 14
mm9_v1_chr2_-_38080023_38080025	0.148324	HOX{A6,A7,B6,B7}.p2	AK033323|8030493G06Rik|320880|RIKEN cDNA 8030493G06 gene
mm9_v1_chr14_+_27399015_27399092	0.148312	HOX{A6,A7,B6,B7}.p2	AK054295|Fam116a|211922|family with sequence similarity 116, member A	NM_001134465|Fam116a|211922|family with sequence similarity 116, member A	NM_145969|Fam116a|211922|family with sequence similarity 116, member A	AK132219|Fam116a|211922|family with sequence similarity 116, member A	AK131163|Fam116a|211922|family with sequence similarity 116, member A	BC025603|Fam116a|211922|family with sequence similarity 116, member A	AK161908|Fam116a|211922|family with sequence similarity 116, member A	AK054197|Fam116a|211922|family with sequence similarity 116, member A
mm9_v1_chr17_+_70318530_70318585	0.148281	HOX{A6,A7,B6,B7}.p2	AK147448|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr18_+_35758269_35758376	0.148246	HOX{A6,A7,B6,B7}.p2	AK146327|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK167545|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK169207|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK169411|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK154453|Paip2|67869|polyadenylate-binding protein-interacting protein 2	BC010190|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK150957|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK005462|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK009909|Paip2|67869|polyadenylate-binding protein-interacting protein 2	NM_026420|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr19_-_54018933_54018969	0.148191	HOX{A6,A7,B6,B7}.p2	BC040803|Bbip1|66360|BBSome interacting protein 1	AK011271|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr3_+_117278144_117278545	0.148006	HOX{A6,A7,B6,B7}.p2	AK032034|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK082692|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	BC031879|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK076176|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	NM_029425|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK014763|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK043629|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene
mm9_v1_chr5_+_31754808_31754902	0.147937	HOX{A6,A7,B6,B7}.p2	NM_172993|Zfp512|269639|zinc finger protein 512	AK173267|Zfp512|269639|zinc finger protein 512	AK146353|Zfp512|269639|zinc finger protein 512	AK084205|Zfp512|269639|zinc finger protein 512	AK149921|Zfp512|269639|zinc finger protein 512	AK154918|Zfp512|269639|zinc finger protein 512	BC089160|Zfp512|269639|zinc finger protein 512	BC066136|Zfp512|269639|zinc finger protein 512
mm9_v1_chr6_-_53770406_53770488	0.147928	HOX{A6,A7,B6,B7}.p2	AK122338|Tril|66873|TLR4 interactor with leucine-rich repeats	AK033401|Tril|66873|TLR4 interactor with leucine-rich repeats	AK004681|Tril|66873|TLR4 interactor with leucine-rich repeats
mm9_v1_chr2_+_11093739_11093765	0.147867	HOX{A6,A7,B6,B7}.p2	AK085546|Prkcq|18761|protein kinase C, theta
mm9_v1_chr10_+_53057491_53057558	0.14747	HOX{A6,A7,B6,B7}.p2	NM_001141927|Pln|18821|phospholamban	NM_023129|Pln|18821|phospholamban	BC061097|Pln|18821|phospholamban	AK002622|Pln|18821|phospholamban	AK040718|Pln|18821|phospholamban	S46792|Pln|18821|phospholamban	AK142708|Pln|18821|phospholamban	AK052199|Pln|18821|phospholamban
mm9_v1_chr2_+_142904128_142904227	0.147072	HOX{A6,A7,B6,B7}.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr15_+_81725666_81725708	0.146835	HOX{A6,A7,B6,B7}.p2	AK188036|Aco2|11429|aconitase 2, mitochondrial	AK213382|Aco2|11429|aconitase 2, mitochondrial
mm9_v1_chr11_-_120092784_120092898	0.146724	HOX{A6,A7,B6,B7}.p2	AK034741|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK162948|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK013668|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene
mm9_v1_chr11_+_54251680_54251744	0.146566	HOX{A6,A7,B6,B7}.p2	NM_173753|Fnip1|216742|folliculin interacting protein 1	BC079892|Fnip1|216742|folliculin interacting protein 1	AK122574|Fnip1|216742|folliculin interacting protein 1
mm9_v1_chr2_-_156754104_156754212	0.146542	HOX{A6,A7,B6,B7}.p2	AK183588|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr7_-_106289567_106289603	0.14636	HOX{A6,A7,B6,B7}.p2	AK030814|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr4_-_53156928_53156953	0.146223	HOX{A6,A7,B6,B7}.p2	X75926|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr11_-_11708917_11708964	0.146143	HOX{A6,A7,B6,B7}.p2	BC051942|Fignl1|60530|fidgetin-like 1	BC052415|Fignl1|60530|fidgetin-like 1	AK082092|Fignl1|60530|fidgetin-like 1	AK143850|Fignl1|60530|fidgetin-like 1	AK051324|Fignl1|60530|fidgetin-like 1	AK051874|Fignl1|60530|fidgetin-like 1	AK088574|Fignl1|60530|fidgetin-like 1	AK086769|Fignl1|60530|fidgetin-like 1	NM_001163359|Fignl1|60530|fidgetin-like 1	NM_001163360|Fignl1|60530|fidgetin-like 1	NM_021891|Fignl1|60530|fidgetin-like 1
mm9_v1_chr9_-_39808834_39808834	0.145773	HOX{A6,A7,B6,B7}.p2	BC116754|Olfr979|259112|olfactory receptor 979	BC116756|Olfr979|259112|olfactory receptor 979	NM_147108|Olfr979|259112|olfactory receptor 979
mm9_v1_chr6_-_124729735_124729744	0.145716	HOX{A6,A7,B6,B7}.p2	NM_013588|Lrrc23|16977|leucine rich repeat containing 23	AK015011|Lrrc23|16977|leucine rich repeat containing 23	BC049601|Lrrc23|16977|leucine rich repeat containing 23
mm9_v1_chr12_+_25257180_25257270	0.1452	HOX{A6,A7,B6,B7}.p2	AF411212|Grhl1|195733|grainyhead-like 1 (Drosophila)	BC013080|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK161048|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr19_-_38117813_38117907	0.14487	HOX{A6,A7,B6,B7}.p2	BC150790|Myof|226101|myoferlin	AK086107|Myof|226101|myoferlin	AK173131|Myof|226101|myoferlin	AK087302|Myof|226101|myoferlin	AK031666|Myof|226101|myoferlin	AK087176|Myof|226101|myoferlin
mm9_v1_chr19_-_4011251_4011428	0.144862	HOX{A6,A7,B6,B7}.p2	AK189391|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK206448|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr1_-_99873795_99873812	0.144803	HOX{A6,A7,B6,B7}.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr6_+_120314116_120314182	0.144662	HOX{A6,A7,B6,B7}.p2	AK041568|Kdm5a|214899|lysine (K)-specific demethylase 5A	NM_145997|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK166055|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK159079|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK144877|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK139619|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK046187|Kdm5a|214899|lysine (K)-specific demethylase 5A	BC011506|Kdm5a|214899|lysine (K)-specific demethylase 5A
mm9_v1_chr9_-_70504934_70505009	0.144599	HOX{A6,A7,B6,B7}.p2	BC058683|Fam63b|235461|family with sequence similarity 63, member B	AK046623|Fam63b|235461|family with sequence similarity 63, member B	BC049357|Fam63b|235461|family with sequence similarity 63, member B	AK046403|Fam63b|235461|family with sequence similarity 63, member B	AK035930|Fam63b|235461|family with sequence similarity 63, member B	NM_172772|Fam63b|235461|family with sequence similarity 63, member B	AK220158|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr15_+_99543952_99544029	0.144547	HOX{A6,A7,B6,B7}.p2	AK190322|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr9_-_39909072_39909072	0.144321	HOX{A6,A7,B6,B7}.p2	NM_146608|Olfr984|258601|olfactory receptor 984
mm9_v1_chr5_+_34967936_34968062	0.14414	HOX{A6,A7,B6,B7}.p2	AK207405|Add1|11518|adducin 1 (alpha)	AK215011|Add1|11518|adducin 1 (alpha)
mm9_v1_chr5_-_122952179_122952182	0.144112	HOX{A6,A7,B6,B7}.p2	AK220538|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr13_-_55122556_55122626	0.144093	HOX{A6,A7,B6,B7}.p2	AK149992|Hk3|212032|hexokinase 3	BC028480|Hk3|212032|hexokinase 3	AK149651|Hk3|212032|hexokinase 3	AK159857|Hk3|212032|hexokinase 3	AK170813|Hk3|212032|hexokinase 3	AK171248|Hk3|212032|hexokinase 3	AK140444|Hk3|212032|hexokinase 3	AK163658|Hk3|212032|hexokinase 3
mm9_v1_chr18_+_36838868_36838897	0.143841	HOX{A6,A7,B6,B7}.p2	NM_001083317|Slc35a4|67843|solute carrier family 35, member A4	NM_026404|Slc35a4|67843|solute carrier family 35, member A4
mm9_v1_chr3_-_153574996_153575274	0.143734	HOX{A6,A7,B6,B7}.p2	AK160162|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC003948|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC021335|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	AF231926|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	U12922|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC132473|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC138547|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145323|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145324|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145325|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145326|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	NM_011231|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC057661|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit
mm9_v1_chr11_+_51912319_51912329	0.143332	HOX{A6,A7,B6,B7}.p2	AK076110|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	NM_019411|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chrX_-_99266499_99266645	0.143127	HOX{A6,A7,B6,B7}.p2	BC132391|Rgag4|331474|retrotransposon gag domain containing 4	BC137795|Rgag4|331474|retrotransposon gag domain containing 4	AK032151|Rgag4|331474|retrotransposon gag domain containing 4	AK220436|Rgag4|331474|retrotransposon gag domain containing 4	NM_183318|Rgag4|331474|retrotransposon gag domain containing 4
mm9_v1_chr2_-_160773804_160773823	0.142985	HOX{A6,A7,B6,B7}.p2	AK017414|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr11_+_74743743_74743795	0.142752	HOX{A6,A7,B6,B7}.p2	AK129203|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr1_-_132950390_132950506	0.142385	HOX{A6,A7,B6,B7}.p2	AK201240|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr3_+_95428905_95429041	0.142347	HOX{A6,A7,B6,B7}.p2	AK006149|Ensa|56205|endosulfine alpha	AK149726|Ensa|56205|endosulfine alpha	AK161290|Ensa|56205|endosulfine alpha	BC059724|Ensa|56205|endosulfine alpha	BC020533|Ensa|56205|endosulfine alpha	BC058802|Ensa|56205|endosulfine alpha	AJ005985|Ensa|56205|endosulfine alpha
mm9_v1_chr7_+_117161753_117161793	0.142091	HOX{A6,A7,B6,B7}.p2	AK039534|Ipo7|233726|importin 7	AK053498|Ipo7|233726|importin 7
mm9_v1_chr8_+_35224310_35224396	0.141902	HOX{A6,A7,B6,B7}.p2	AK185123|Tmem66|67887|transmembrane protein 66	AK180893|Tmem66|67887|transmembrane protein 66	AK197284|Tmem66|67887|transmembrane protein 66	AK207744|Tmem66|67887|transmembrane protein 66	AK213493|Tmem66|67887|transmembrane protein 66	AK211246|Tmem66|67887|transmembrane protein 66
mm9_v1_chr8_-_25785199_25785226	0.141303	HOX{A6,A7,B6,B7}.p2	BC144841|Adam18|13524|a disintegrin and metallopeptidase domain 18	BC145751|Adam18|13524|a disintegrin and metallopeptidase domain 18	BC051136|Adam18|13524|a disintegrin and metallopeptidase domain 18	AF167405|Adam18|13524|a disintegrin and metallopeptidase domain 18	AK076633|Adam18|13524|a disintegrin and metallopeptidase domain 18	NM_010084|Adam18|13524|a disintegrin and metallopeptidase domain 18
mm9_v1_chr13_-_100286446_100286519	0.141296	HOX{A6,A7,B6,B7}.p2	BC019183|Mtap1b|17755|microtubule-associated protein 1B	BC046287|Mtap1b|17755|microtubule-associated protein 1B	BC052016|Mtap1b|17755|microtubule-associated protein 1B	BC078457|Mtap1b|17755|microtubule-associated protein 1B	BC138033|Mtap1b|17755|microtubule-associated protein 1B	BC138034|Mtap1b|17755|microtubule-associated protein 1B	BC037105|Mtap1b|17755|microtubule-associated protein 1B	X51396|Mtap1b|17755|microtubule-associated protein 1B	AK158307|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr1_-_187941133_187941207	0.141234	HOX{A6,A7,B6,B7}.p2	AK148533|Lyplal1|226791|lysophospholipase-like 1	BC027340|Lyplal1|226791|lysophospholipase-like 1	NM_146106|Lyplal1|226791|lysophospholipase-like 1
mm9_v1_chr19_+_8913965_8913992	0.141181	HOX{A6,A7,B6,B7}.p2	AF069954|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr3_-_88356772_88356884	0.141092	HOX{A6,A7,B6,B7}.p2	AJ277386|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	AK019006|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	BC031816|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	NM_031248|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	AK008126|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	AK008185|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	AK008395|Lamtor2|83409|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
mm9_v1_chr18_+_77304212_77304557	0.140787	HOX{A6,A7,B6,B7}.p2	NM_001164168|Pias2|17344|protein inhibitor of activated STAT 2	NM_001164170|Pias2|17344|protein inhibitor of activated STAT 2	BC034711|Pias2|17344|protein inhibitor of activated STAT 2	BC005596|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr10_+_41250456_41250646	0.14076	HOX{A6,A7,B6,B7}.p2	AK217133|Cd164|53599|CD164 antigen	AK135616|Cd164|53599|CD164 antigen
mm9_v1_chr10_+_80642620_80642797	0.140678	HOX{A6,A7,B6,B7}.p2	AK200910|Eef2|13629|eukaryotic translation elongation factor 2	AK201238|Eef2|13629|eukaryotic translation elongation factor 2	AK207352|Eef2|13629|eukaryotic translation elongation factor 2	AK192485|Eef2|13629|eukaryotic translation elongation factor 2	AK211322|Eef2|13629|eukaryotic translation elongation factor 2	AK217129|Eef2|13629|eukaryotic translation elongation factor 2	AK202379|Eef2|13629|eukaryotic translation elongation factor 2	AK191408|Eef2|13629|eukaryotic translation elongation factor 2	AK199168|Eef2|13629|eukaryotic translation elongation factor 2	AK210206|Eef2|13629|eukaryotic translation elongation factor 2	U89416|Eef2|13629|eukaryotic translation elongation factor 2	AK161993|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr8_+_71626352_71626466	0.140677	HOX{A6,A7,B6,B7}.p2	AK187885|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK196120|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK205248|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK207339|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK207413|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK209086|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK210829|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2
mm9_v1_chr11_-_53083217_53083336	0.140643	HOX{A6,A7,B6,B7}.p2	AK180907|Hspa4|15525|heat shock protein 4	AK148883|Hspa4|15525|heat shock protein 4
mm9_v1_chr9_-_119977358_119977413	0.140577	HOX{A6,A7,B6,B7}.p2	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr9_+_14305055_14305063	0.140471	HOX{A6,A7,B6,B7}.p2	NM_023153|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chr14_+_21167481_21167541	0.140104	HOX{A6,A7,B6,B7}.p2	AK077495|Fam149b|105428|family with sequence similarity 149, member B	BC057907|Fam149b|105428|family with sequence similarity 149, member B	BC069846|Fam149b|105428|family with sequence similarity 149, member B	BC025183|Fam149b|105428|family with sequence similarity 149, member B	AK037808|Fam149b|105428|family with sequence similarity 149, member B	BC058650|Fam149b|105428|family with sequence similarity 149, member B	BC059221|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr12_-_47919695_47919761	0.138893	HOX{A6,A7,B6,B7}.p2	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr2_-_164063436_164063437	0.138638	HOX{A6,A7,B6,B7}.p2	AK020661|Svs2|53878|seminal vesicle secretory protein 2
mm9_v1_chr16_-_31948214_31948358	0.138196	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_+_56443736_56443753	0.137895	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_+_10059060_10059150	0.137455	HOX{A6,A7,B6,B7}.p2	AK180886|Fth1|14319|ferritin heavy chain 1
mm9_v1_chr4_-_134119533_134119716	0.137419	HOX{A6,A7,B6,B7}.p2	AK198550|Man1c1|230815|mannosidase, alpha, class 1C, member 1
mm9_v1_chr16_-_75909440_75909580	0.136827	HOX{A6,A7,B6,B7}.p2	AK041340|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AF222928|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AK041566|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AK053946|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	BC052906|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	BC064778|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	DQ333189|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	NM_023380|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1
mm9_v1_chr9_-_108469672_108469775	0.13647	HOX{A6,A7,B6,B7}.p2	AF235017|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	NM_023247|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	BC027513|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm9_v1_chr4_+_115769086_115769178	0.136275	HOX{A6,A7,B6,B7}.p2	AK217820|Lrrc41|230654|leucine rich repeat containing 41
mm9_v1_chr3_-_54858963_54858976	0.136182	HOX{A6,A7,B6,B7}.p2	AK077114|Ccna1|12427|cyclin A1	NM_007628|Ccna1|12427|cyclin A1	X84311|Ccna1|12427|cyclin A1
mm9_v1_chr19_-_13870096_13870098	0.136044	HOX{A6,A7,B6,B7}.p2	BC111435|Olfr1497|258736|olfactory receptor 1497	NM_146741|Olfr1497|258736|olfactory receptor 1497
mm9_v1_chr6_+_4484651_4484672	0.135995	HOX{A6,A7,B6,B7}.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr10_-_80813198_80813232	0.135972	HOX{A6,A7,B6,B7}.p2	AK153816|Hmg20b|15353|high mobility group 20 B	NM_001163166|Hmg20b|15353|high mobility group 20 B
mm9_v1_chr16_-_85030543_85030555	0.135925	HOX{A6,A7,B6,B7}.p2	AK076506|App|11820|amyloid beta (A4) precursor protein	AK200287|App|11820|amyloid beta (A4) precursor protein	AK203089|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr16_+_43640198_43640217	0.135697	HOX{A6,A7,B6,B7}.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr5_+_90919758_90919765	0.135099	HOX{A6,A7,B6,B7}.p2	AK075972|Afp|11576|alpha fetoprotein	AK076197|Afp|11576|alpha fetoprotein	AK146513|Afp|11576|alpha fetoprotein	AK146524|Afp|11576|alpha fetoprotein	AK168426|Afp|11576|alpha fetoprotein	AK168574|Afp|11576|alpha fetoprotein	AK168751|Afp|11576|alpha fetoprotein	AK169046|Afp|11576|alpha fetoprotein	AK169054|Afp|11576|alpha fetoprotein	AK010934|Afp|11576|alpha fetoprotein	AK076053|Afp|11576|alpha fetoprotein	AK145975|Afp|11576|alpha fetoprotein	AK168576|Afp|11576|alpha fetoprotein	AK168883|Afp|11576|alpha fetoprotein	AK169147|Afp|11576|alpha fetoprotein	AK167549|Afp|11576|alpha fetoprotein	V00743|Afp|11576|alpha fetoprotein
mm9_v1_chr9_+_121643763_121643808	0.134719	HOX{A6,A7,B6,B7}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr14_+_120674976_120674983	0.134704	HOX{A6,A7,B6,B7}.p2	AK178232|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr1_+_89516886_89517022	0.134692	HOX{A6,A7,B6,B7}.p2	NM_001110192|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	NM_001110193|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	NM_010566|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	U39203|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	AK143560|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	U52044|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	AK162401|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	AF228679|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	U51742|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	AF125996|Inpp5d|16331|inositol polyphosphate-5-phosphatase D	BC108328|Inpp5d|16331|inositol polyphosphate-5-phosphatase D
mm9_v1_chr5_-_122952228_122952237	0.134555	HOX{A6,A7,B6,B7}.p2	NM_001110140|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	NM_009722|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr6_+_124780193_124780220	0.134528	HOX{A6,A7,B6,B7}.p2	NM_013538|Cdca3|14793|cell division cycle associated 3	AK011313|Cdca3|14793|cell division cycle associated 3
mm9_v1_chr3_-_89832276_89832298	0.134504	HOX{A6,A7,B6,B7}.p2	AK082804|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr1_+_101669228_101669341	0.134351	HOX{A6,A7,B6,B7}.p2	NM_172851|Cntnap5b|241175|contactin associated protein-like 5B
mm9_v1_chr17_+_69506165_69506202	0.134142	HOX{A6,A7,B6,B7}.p2	BC152368|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	BC152548|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3
mm9_v1_chr4_+_150302107_150302108	0.134034	HOX{A6,A7,B6,B7}.p2	NM_001077509|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK154625|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr5_-_100407613_100407631	0.133447	HOX{A6,A7,B6,B7}.p2	BC011172|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr7_+_117266253_117266328	0.133403	HOX{A6,A7,B6,B7}.p2	AK039572|Wee1|22390|WEE 1 homolog 1 (S. pombe)
mm9_v1_chr18_+_39152776_39152837	0.133348	HOX{A6,A7,B6,B7}.p2	AK011368|Arhgap26|71302|Rho GTPase activating protein 26	NM_175164|Arhgap26|71302|Rho GTPase activating protein 26
mm9_v1_chr6_-_72386442_72386506	0.132945	HOX{A6,A7,B6,B7}.p2	AK193673|Mat2a|232087|methionine adenosyltransferase II, alpha	AK207616|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr14_+_55502433_55502449	0.132891	HOX{A6,A7,B6,B7}.p2	AK013244|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr1_+_193399633_193399665	0.132851	HOX{A6,A7,B6,B7}.p2	AK052103|Ints7|77065|integrator complex subunit 7	AK085336|Ints7|77065|integrator complex subunit 7	AK034856|Ints7|77065|integrator complex subunit 7	BC054120|Ints7|77065|integrator complex subunit 7
mm9_v1_chr14_-_27353156_27353225	0.132843	HOX{A6,A7,B6,B7}.p2	AK129403|Slmap|83997|sarcolemma associated protein	NM_032008|Slmap|83997|sarcolemma associated protein
mm9_v1_chrX_-_45866446_45866665	0.132327	HOX{A6,A7,B6,B7}.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr2_-_164630371_164630416	0.132147	HOX{A6,A7,B6,B7}.p2	AF441166|Acot8|170789|acyl-CoA thioesterase 8	NM_133240|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr15_+_81066029_81066052	0.13207	HOX{A6,A7,B6,B7}.p2	AK134867|Mchr1|207911|melanin-concentrating hormone receptor 1
mm9_v1_chr10_+_127526038_127526102	0.132045	HOX{A6,A7,B6,B7}.p2	BC018392|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK183981|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198015|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198554|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK200200|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK205830|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212143|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK178407|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK182340|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK189215|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK190147|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK191197|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK192149|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198620|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK202885|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK215685|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216714|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217489|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK195031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK196936|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198338|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr17_+_43526389_43526484	0.131962	HOX{A6,A7,B6,B7}.p2	NM_001081178|Gpr116|224792|G protein-coupled receptor 116
mm9_v1_chr3_+_131282079_131282167	0.131919	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_157610182_157610429	0.131912	HOX{A6,A7,B6,B7}.p2	AK135906|Ankrd13c|433667|ankyrin repeat domain 13c	AK157542|Ankrd13c|433667|ankyrin repeat domain 13c	BC065088|Ankrd13c|433667|ankyrin repeat domain 13c	BC138991|Ankrd13c|433667|ankyrin repeat domain 13c	BC138992|Ankrd13c|433667|ankyrin repeat domain 13c	NM_001013806|Ankrd13c|433667|ankyrin repeat domain 13c
mm9_v1_chr4_-_19636000_19636212	0.131557	HOX{A6,A7,B6,B7}.p2	AK137588|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	BC026829|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK168567|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK032232|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK042432|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	NM_177327|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr1_+_134373950_134374067	0.13148	HOX{A6,A7,B6,B7}.p2	AK049247|Rbbp5|213464|retinoblastoma binding protein 5	BC057632|Rbbp5|213464|retinoblastoma binding protein 5	AK179022|Rbbp5|213464|retinoblastoma binding protein 5	AK195903|Rbbp5|213464|retinoblastoma binding protein 5
mm9_v1_chr3_-_107847589_107847699	0.131401	HOX{A6,A7,B6,B7}.p2	AF501320|Gstm4|14865|glutathione S-transferase, mu 4	AF464943|Gstm4|14865|glutathione S-transferase, mu 4	BC030444|Gstm4|14865|glutathione S-transferase, mu 4
mm9_v1_chr10_+_117641997_117642023	0.131277	HOX{A6,A7,B6,B7}.p2	AJ249491|Il22|50929|interleukin 22	BC104348|Il22|50929|interleukin 22	BC104349|Il22|50929|interleukin 22	NM_016971|Il22|50929|interleukin 22	BC116235|Il22|50929|interleukin 22
mm9_v1_chr15_+_84847570_84847657	0.131249	HOX{A6,A7,B6,B7}.p2	BC125336|Upk3a|22270|uroplakin 3A	BC125338|Upk3a|22270|uroplakin 3A	NM_023478|Upk3a|22270|uroplakin 3A	DQ387454|Upk3a|22270|uroplakin 3A	AF222750|Upk3a|22270|uroplakin 3A
mm9_v1_chr3_+_14863507_14863565	0.131225	HOX{A6,A7,B6,B7}.p2	AK003671|Car3|12350|carbonic anhydrase 3	AK075630|Car3|12350|carbonic anhydrase 3	AK002349|Car3|12350|carbonic anhydrase 3	AK017227|Car3|12350|carbonic anhydrase 3	BC011129|Car3|12350|carbonic anhydrase 3	NM_007606|Car3|12350|carbonic anhydrase 3
mm9_v1_chr4_+_155243643_155243753	0.131211	HOX{A6,A7,B6,B7}.p2	AK167607|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK090206|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	NM_028020|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK150436|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK152740|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	BC011155|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK172533|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK010425|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK185355|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like
mm9_v1_chr10_+_80644736_80644777	0.131207	HOX{A6,A7,B6,B7}.p2	AK201283|Eef2|13629|eukaryotic translation elongation factor 2	AK189877|Eef2|13629|eukaryotic translation elongation factor 2	AK189936|Eef2|13629|eukaryotic translation elongation factor 2	AK190622|Eef2|13629|eukaryotic translation elongation factor 2	AK190628|Eef2|13629|eukaryotic translation elongation factor 2	AK190763|Eef2|13629|eukaryotic translation elongation factor 2	AK190784|Eef2|13629|eukaryotic translation elongation factor 2	AK190861|Eef2|13629|eukaryotic translation elongation factor 2	AK190927|Eef2|13629|eukaryotic translation elongation factor 2	AK191362|Eef2|13629|eukaryotic translation elongation factor 2	AK191366|Eef2|13629|eukaryotic translation elongation factor 2	AK191562|Eef2|13629|eukaryotic translation elongation factor 2	AK191622|Eef2|13629|eukaryotic translation elongation factor 2	AK191649|Eef2|13629|eukaryotic translation elongation factor 2	AK191693|Eef2|13629|eukaryotic translation elongation factor 2	AK191810|Eef2|13629|eukaryotic translation elongation factor 2	AK191929|Eef2|13629|eukaryotic translation elongation factor 2	AK192150|Eef2|13629|eukaryotic translation elongation factor 2	AK192166|Eef2|13629|eukaryotic translation elongation factor 2	AK192179|Eef2|13629|eukaryotic translation elongation factor 2	AK192372|Eef2|13629|eukaryotic translation elongation factor 2	AK192424|Eef2|13629|eukaryotic translation elongation factor 2	AK192757|Eef2|13629|eukaryotic translation elongation factor 2	AK192765|Eef2|13629|eukaryotic translation elongation factor 2	AK193012|Eef2|13629|eukaryotic translation elongation factor 2	AK193195|Eef2|13629|eukaryotic translation elongation factor 2	AK193267|Eef2|13629|eukaryotic translation elongation factor 2	AK193334|Eef2|13629|eukaryotic translation elongation factor 2	AK193679|Eef2|13629|eukaryotic translation elongation factor 2	AK193887|Eef2|13629|eukaryotic translation elongation factor 2	AK193930|Eef2|13629|eukaryotic translation elongation factor 2	AK193934|Eef2|13629|eukaryotic translation elongation factor 2	AK193935|Eef2|13629|eukaryotic translation elongation factor 2	AK193939|Eef2|13629|eukaryotic translation elongation factor 2	AK194344|Eef2|13629|eukaryotic translation elongation factor 2	AK195004|Eef2|13629|eukaryotic translation elongation factor 2	AK195059|Eef2|13629|eukaryotic translation elongation factor 2	AK195080|Eef2|13629|eukaryotic translation elongation factor 2	AK195098|Eef2|13629|eukaryotic translation elongation factor 2	AK195214|Eef2|13629|eukaryotic translation elongation factor 2	AK195454|Eef2|13629|eukaryotic translation elongation factor 2	AK195506|Eef2|13629|eukaryotic translation elongation factor 2	AK196079|Eef2|13629|eukaryotic translation elongation factor 2	AK196233|Eef2|13629|eukaryotic translation elongation factor 2	AK196287|Eef2|13629|eukaryotic translation elongation factor 2	AK196489|Eef2|13629|eukaryotic translation elongation factor 2	AK196549|Eef2|13629|eukaryotic translation elongation factor 2	AK196556|Eef2|13629|eukaryotic translation elongation factor 2	AK196849|Eef2|13629|eukaryotic translation elongation factor 2	AK196962|Eef2|13629|eukaryotic translation elongation factor 2	AK197222|Eef2|13629|eukaryotic translation elongation factor 2	AK197244|Eef2|13629|eukaryotic translation elongation factor 2	AK197312|Eef2|13629|eukaryotic translation elongation factor 2	AK197319|Eef2|13629|eukaryotic translation elongation factor 2	AK197355|Eef2|13629|eukaryotic translation elongation factor 2	AK197363|Eef2|13629|eukaryotic translation elongation factor 2	AK197549|Eef2|13629|eukaryotic translation elongation factor 2	AK197618|Eef2|13629|eukaryotic translation elongation factor 2	AK197705|Eef2|13629|eukaryotic translation elongation factor 2	AK197848|Eef2|13629|eukaryotic translation elongation factor 2	AK198166|Eef2|13629|eukaryotic translation elongation factor 2	AK198483|Eef2|13629|eukaryotic translation elongation factor 2	AK198569|Eef2|13629|eukaryotic translation elongation factor 2	AK198683|Eef2|13629|eukaryotic translation elongation factor 2	AK198891|Eef2|13629|eukaryotic translation elongation factor 2	AK199179|Eef2|13629|eukaryotic translation elongation factor 2	AK199404|Eef2|13629|eukaryotic translation elongation factor 2	AK199520|Eef2|13629|eukaryotic translation elongation factor 2	AK199588|Eef2|13629|eukaryotic translation elongation factor 2	AK199675|Eef2|13629|eukaryotic translation elongation factor 2	AK199703|Eef2|13629|eukaryotic translation elongation factor 2	AK199709|Eef2|13629|eukaryotic translation elongation factor 2	AK199751|Eef2|13629|eukaryotic translation elongation factor 2	AK199803|Eef2|13629|eukaryotic translation elongation factor 2	AK199810|Eef2|13629|eukaryotic translation elongation factor 2	AK200092|Eef2|13629|eukaryotic translation elongation factor 2	AK200307|Eef2|13629|eukaryotic translation elongation factor 2	AK200465|Eef2|13629|eukaryotic translation elongation factor 2	AK200510|Eef2|13629|eukaryotic translation elongation factor 2	AK200525|Eef2|13629|eukaryotic translation elongation factor 2	AK200843|Eef2|13629|eukaryotic translation elongation factor 2	AK201052|Eef2|13629|eukaryotic translation elongation factor 2	AK201117|Eef2|13629|eukaryotic translation elongation factor 2	AK201643|Eef2|13629|eukaryotic translation elongation factor 2	AK202077|Eef2|13629|eukaryotic translation elongation factor 2	AK202127|Eef2|13629|eukaryotic translation elongation factor 2	AK202201|Eef2|13629|eukaryotic translation elongation factor 2	AK202326|Eef2|13629|eukaryotic translation elongation factor 2	AK202401|Eef2|13629|eukaryotic translation elongation factor 2	AK202472|Eef2|13629|eukaryotic translation elongation factor 2	AK202485|Eef2|13629|eukaryotic translation elongation factor 2	AK202505|Eef2|13629|eukaryotic translation elongation factor 2	AK202849|Eef2|13629|eukaryotic translation elongation factor 2	AK202866|Eef2|13629|eukaryotic translation elongation factor 2	AK203391|Eef2|13629|eukaryotic translation elongation factor 2	AK204582|Eef2|13629|eukaryotic translation elongation factor 2	AK204590|Eef2|13629|eukaryotic translation elongation factor 2	AK204680|Eef2|13629|eukaryotic translation elongation factor 2	AK204768|Eef2|13629|eukaryotic translation elongation factor 2	AK204823|Eef2|13629|eukaryotic translation elongation factor 2	AK207046|Eef2|13629|eukaryotic translation elongation factor 2	AK211931|Eef2|13629|eukaryotic translation elongation factor 2	AK218458|Eef2|13629|eukaryotic translation elongation factor 2	AK192362|Eef2|13629|eukaryotic translation elongation factor 2	AK203693|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr9_-_107673316_107673317	0.131129	HOX{A6,A7,B6,B7}.p2	AK161794|Rbm5|83486|RNA binding motif protein 5	BC054820|Rbm5|83486|RNA binding motif protein 5	BC031899|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr2_-_35904792_35904897	0.130852	HOX{A6,A7,B6,B7}.p2	BC024673|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	BC012416|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	AK002744|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	NM_026703|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8
mm9_v1_chr6_+_145159653_145159723	0.13062	HOX{A6,A7,B6,B7}.p2	NM_001163628|Lyrm5|67636|LYR motif containing 5	AF412300|Lyrm5|67636|LYR motif containing 5	NM_133688|Lyrm5|67636|LYR motif containing 5	AY753325|Lyrm5|67636|LYR motif containing 5	AF412298|Lyrm5|67636|LYR motif containing 5	AK075835|Lyrm5|67636|LYR motif containing 5	AF412299|Lyrm5|67636|LYR motif containing 5	AK015530|Lyrm5|67636|LYR motif containing 5	AK046179|Lyrm5|67636|LYR motif containing 5	BC021522|Lyrm5|67636|LYR motif containing 5
mm9_v1_chr2_+_103809709_103809717	0.130563	HOX{A6,A7,B6,B7}.p2	NM_001142336|Lmo2|16909|LIM domain only 2
mm9_v1_chr9_+_50425460_50425487	0.130178	HOX{A6,A7,B6,B7}.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr17_+_34056585_34056649	0.130148	HOX{A6,A7,B6,B7}.p2	AK077299|Tapbp|21356|TAP binding protein	AK151134|Tapbp|21356|TAP binding protein	AK169697|Tapbp|21356|TAP binding protein	AK151878|Tapbp|21356|TAP binding protein	AK152019|Tapbp|21356|TAP binding protein	AK170528|Tapbp|21356|TAP binding protein	AK151807|Tapbp|21356|TAP binding protein	BC015074|Tapbp|21356|TAP binding protein	BC052870|Tapbp|21356|TAP binding protein	AF106278|Tapbp|21356|TAP binding protein	AJ316613|Tapbp|21356|TAP binding protein	AY734471|Tapbp|21356|TAP binding protein	AY734477|Tapbp|21356|TAP binding protein	AY734468|Tapbp|21356|TAP binding protein	AY734469|Tapbp|21356|TAP binding protein
mm9_v1_chr15_+_54943878_54943952	0.129795	HOX{A6,A7,B6,B7}.p2	BC004774|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr3_-_126865105_126865154	0.129648	HOX{A6,A7,B6,B7}.p2	AK081244|Ank2|109676|ankyrin 2, brain
mm9_v1_chr9_+_74885522_74885560	0.128971	HOX{A6,A7,B6,B7}.p2	BC040206|Arpp19|59046|cAMP-regulated phosphoprotein 19	NM_021548|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr11_-_43496158_43496178	0.128777	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_99216494_99216530	0.128309	HOX{A6,A7,B6,B7}.p2	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chr4_-_116314542_116314556	0.128009	HOX{A6,A7,B6,B7}.p2	AK178751|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK203039|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr15_-_98781060_98781163	0.127961	HOX{A6,A7,B6,B7}.p2	M28729|Tuba1a|22142|tubulin, alpha 1A	AK201449|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr7_-_3581429_3581535	0.127578	HOX{A6,A7,B6,B7}.p2	BC024356|Tfpt|69714|TCF3 (E2A) fusion partner	AF267988|Tfpt|69714|TCF3 (E2A) fusion partner	NM_023524|Tfpt|69714|TCF3 (E2A) fusion partner	AK155925|Tfpt|69714|TCF3 (E2A) fusion partner
mm9_v1_chr5_+_87233514_87233581	0.127398	HOX{A6,A7,B6,B7}.p2	NM_177680|Ythdc1|231386|YTH domain containing 1
mm9_v1_chr1_-_158404299_158404465	0.127002	HOX{A6,A7,B6,B7}.p2	AK213760|Soat1|20652|sterol O-acyltransferase 1	AK054149|Soat1|20652|sterol O-acyltransferase 1	AK142486|Soat1|20652|sterol O-acyltransferase 1	DQ903181|Soat1|20652|sterol O-acyltransferase 1	S81092|Soat1|20652|sterol O-acyltransferase 1	AK159393|Soat1|20652|sterol O-acyltransferase 1	AK159529|Soat1|20652|sterol O-acyltransferase 1	AK160017|Soat1|20652|sterol O-acyltransferase 1	NM_009230|Soat1|20652|sterol O-acyltransferase 1
mm9_v1_chr1_+_174048400_174048426	0.126918	HOX{A6,A7,B6,B7}.p2	BC005609|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr11_-_98054597_98054606	0.126896	HOX{A6,A7,B6,B7}.p2	AK049203|Med1|19014|mediator complex subunit 1	AK054437|Med1|19014|mediator complex subunit 1	NM_001080118|Med1|19014|mediator complex subunit 1	NM_134027|Med1|19014|mediator complex subunit 1
mm9_v1_chr2_+_65683823_65683911	0.126746	HOX{A6,A7,B6,B7}.p2	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr7_+_109818414_109818414	0.126725	HOX{A6,A7,B6,B7}.p2	BC138388|Olfr556|258749|olfactory receptor 556	NM_146754|Olfr556|258749|olfactory receptor 556
mm9_v1_chr8_-_127275549_127275749	0.126712	HOX{A6,A7,B6,B7}.p2	BC023460|Fam89a|69627|family with sequence similarity 89, member A	BC115734|Fam89a|69627|family with sequence similarity 89, member A	BC115819|Fam89a|69627|family with sequence similarity 89, member A	NM_001081120|Fam89a|69627|family with sequence similarity 89, member A
mm9_v1_chr8_+_97125835_97125965	0.126624	HOX{A6,A7,B6,B7}.p2	NM_026274|Rspry1|67610|ring finger and SPRY domain containing 1	BC054121|Rspry1|67610|ring finger and SPRY domain containing 1	AK150941|Rspry1|67610|ring finger and SPRY domain containing 1	AK152435|Rspry1|67610|ring finger and SPRY domain containing 1	AK172461|Rspry1|67610|ring finger and SPRY domain containing 1	AK166167|Rspry1|67610|ring finger and SPRY domain containing 1	AK151018|Rspry1|67610|ring finger and SPRY domain containing 1	AK152024|Rspry1|67610|ring finger and SPRY domain containing 1	AK156697|Rspry1|67610|ring finger and SPRY domain containing 1	AK146028|Rspry1|67610|ring finger and SPRY domain containing 1	AK172567|Rspry1|67610|ring finger and SPRY domain containing 1	AK032416|Rspry1|67610|ring finger and SPRY domain containing 1	AK141443|Rspry1|67610|ring finger and SPRY domain containing 1
mm9_v1_chr1_+_180168023_180168042	0.126366	HOX{A6,A7,B6,B7}.p2	AK216786|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr9_-_45636638_45636736	0.126267	HOX{A6,A7,B6,B7}.p2	AK158671|Cep164|214552|centrosomal protein 164	NM_001081373|Cep164|214552|centrosomal protein 164
mm9_v1_chr11_+_4604650_4604703	0.126217	HOX{A6,A7,B6,B7}.p2	AK051823|Zmat5|67178|zinc finger, matrin type 5	AK012098|Zmat5|67178|zinc finger, matrin type 5	NM_026015|Zmat5|67178|zinc finger, matrin type 5	AK003361|Zmat5|67178|zinc finger, matrin type 5	AK007565|Zmat5|67178|zinc finger, matrin type 5	AK013415|Zmat5|67178|zinc finger, matrin type 5	BC031796|Zmat5|67178|zinc finger, matrin type 5
mm9_v1_chr11_+_97177029_97177191	0.125443	HOX{A6,A7,B6,B7}.p2	NM_025927|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011163|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011605|Mrpl45|67036|mitochondrial ribosomal protein L45	AK081922|Mrpl45|67036|mitochondrial ribosomal protein L45	AK157771|Mrpl45|67036|mitochondrial ribosomal protein L45	BC020130|Mrpl45|67036|mitochondrial ribosomal protein L45	AK198473|Mrpl45|67036|mitochondrial ribosomal protein L45
mm9_v1_chr4_+_132324212_132324345	0.125301	HOX{A6,A7,B6,B7}.p2	AK078006|Rpa2|19891|replication protein A2	AK169847|Rpa2|19891|replication protein A2	AK168680|Rpa2|19891|replication protein A2	NM_011284|Rpa2|19891|replication protein A2	BC004578|Rpa2|19891|replication protein A2	AK011530|Rpa2|19891|replication protein A2	D00812|Rpa2|19891|replication protein A2
mm9_v1_chr16_+_91648068_91648092	0.125291	HOX{A6,A7,B6,B7}.p2	NM_019973|Son|20658|Son DNA binding protein	NM_178880|Son|20658|Son DNA binding protein
mm9_v1_chr16_-_20302299_20302462	0.124906	HOX{A6,A7,B6,B7}.p2	AK039142|Parl|381038|presenilin associated, rhomboid-like	BC083153|Parl|381038|presenilin associated, rhomboid-like	AK151652|Parl|381038|presenilin associated, rhomboid-like	NM_001005767|Parl|381038|presenilin associated, rhomboid-like	AK150980|Parl|381038|presenilin associated, rhomboid-like	AK207637|Parl|381038|presenilin associated, rhomboid-like
mm9_v1_chrX_+_130593867_130593899	0.124821	HOX{A6,A7,B6,B7}.p2	AK147438|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	AK088260|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	NM_133196|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2
mm9_v1_chr7_-_26518101_26518140	0.124759	HOX{A6,A7,B6,B7}.p2	AK182216|Hnrnpul1|232989|heterogeneous nuclear ribonucleoprotein U-like 1
mm9_v1_chr11_-_68825972_68825998	0.124602	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_+_115224911_115225148	0.124557	HOX{A6,A7,B6,B7}.p2	AK039432|Ankrd13a|68420|ankyrin repeat domain 13a	AK156539|Ankrd13a|68420|ankyrin repeat domain 13a	BC049187|Ankrd13a|68420|ankyrin repeat domain 13a	BC061692|Ankrd13a|68420|ankyrin repeat domain 13a	NM_026718|Ankrd13a|68420|ankyrin repeat domain 13a
mm9_v1_chr3_+_132754791_132754924	0.124446	HOX{A6,A7,B6,B7}.p2	AK012829|Ints12|71793|integrator complex subunit 12	AK003874|Ints12|71793|integrator complex subunit 12	AK155162|Ints12|71793|integrator complex subunit 12	AK038713|Ints12|71793|integrator complex subunit 12	BC046996|Ints12|71793|integrator complex subunit 12	BC023801|Ints12|71793|integrator complex subunit 12	NM_027927|Ints12|71793|integrator complex subunit 12
mm9_v1_chr5_-_121459315_121459358	0.124371	HOX{A6,A7,B6,B7}.p2	D29965|Rph3a|19894|rabphilin 3A	AB112924|Rph3a|19894|rabphilin 3A
mm9_v1_chr11_+_115425756_115425843	0.124024	HOX{A6,A7,B6,B7}.p2	NM_001002929|Nup85|445007|nucleoporin 85	BC079856|Nup85|445007|nucleoporin 85	AK017632|Nup85|445007|nucleoporin 85	AF498263|Nup85|445007|nucleoporin 85
mm9_v1_chr15_-_102347249_102347300	0.123898	HOX{A6,A7,B6,B7}.p2	AK034374|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12	BC057572|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12
mm9_v1_chr19_-_11410534_11410635	0.123752	HOX{A6,A7,B6,B7}.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr3_-_88636411_88636470	0.123674	HOX{A6,A7,B6,B7}.p2	AK141588|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK014401|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK033977|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK078122|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene
mm9_v1_chr11_+_78325715_78325934	0.123002	HOX{A6,A7,B6,B7}.p2	AK165703|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	BC012879|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	BC006833|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	NM_026389|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	AK196491|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2
mm9_v1_chr2_-_93873363_93873460	0.122913	HOX{A6,A7,B6,B7}.p2	AK210045|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr9_+_32180002_32180181	0.122669	HOX{A6,A7,B6,B7}.p2	NM_019659|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	AK085262|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	AF012834|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1
mm9_v1_chr4_+_129138915_129138922	0.122524	HOX{A6,A7,B6,B7}.p2	BC049111|Bsdc1|100383|BSD domain containing 1	NM_133889|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr4_-_134108044_134108129	0.122473	HOX{A6,A7,B6,B7}.p2	NM_029100|Sepn1|74777|selenoprotein N, 1
mm9_v1_chr6_+_136467388_136467391	0.121979	HOX{A6,A7,B6,B7}.p2	BC060246|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr8_+_46035561_46035561	0.121973	HOX{A6,A7,B6,B7}.p2	AJ250768|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)	NM_001081286|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)
mm9_v1_chr9_+_107950264_107950349	0.121916	HOX{A6,A7,B6,B7}.p2	AK180972|Ip6k1|27399|inositol hexaphosphate kinase 1	AK192812|Ip6k1|27399|inositol hexaphosphate kinase 1	AK193720|Ip6k1|27399|inositol hexaphosphate kinase 1	AK196386|Ip6k1|27399|inositol hexaphosphate kinase 1	AK198963|Ip6k1|27399|inositol hexaphosphate kinase 1	AK200277|Ip6k1|27399|inositol hexaphosphate kinase 1	AK213940|Ip6k1|27399|inositol hexaphosphate kinase 1	BC069990|Ip6k1|27399|inositol hexaphosphate kinase 1	BC039929|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr2_-_120365581_120365597	0.12158	HOX{A6,A7,B6,B7}.p2	U59739|Zfp106|20402|zinc finger protein 106
mm9_v1_chr10_+_98725858_98725868	0.121572	HOX{A6,A7,B6,B7}.p2	AK088665|Dusp6|67603|dual specificity phosphatase 6	AK005062|Dusp6|67603|dual specificity phosphatase 6	AK088468|Dusp6|67603|dual specificity phosphatase 6	AK148192|Dusp6|67603|dual specificity phosphatase 6	AK159502|Dusp6|67603|dual specificity phosphatase 6	NM_026268|Dusp6|67603|dual specificity phosphatase 6	AK151126|Dusp6|67603|dual specificity phosphatase 6	AK152773|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr18_+_3383216_3383321	0.121349	HOX{A6,A7,B6,B7}.p2	AK004875|Cul2|71745|cullin 2	NM_029402|Cul2|71745|cullin 2	AK160597|Cul2|71745|cullin 2	AK220287|Cul2|71745|cullin 2	AK144693|Cul2|71745|cullin 2	AK028589|Cul2|71745|cullin 2	BC027428|Cul2|71745|cullin 2	BC026779|Cul2|71745|cullin 2
mm9_v1_chr1_+_193801253_193801416	0.121241	HOX{A6,A7,B6,B7}.p2	BC017602|Rd3|74023|retinal degeneration 3	NM_001177900|Rd3|74023|retinal degeneration 3	NM_023727|Rd3|74023|retinal degeneration 3	AK045045|Rd3|74023|retinal degeneration 3	AB030195|Rd3|74023|retinal degeneration 3	BC103778|Rd3|74023|retinal degeneration 3	AK014383|Rd3|74023|retinal degeneration 3	BC116937|Rd3|74023|retinal degeneration 3	BC116935|Rd3|74023|retinal degeneration 3
mm9_v1_chr2_+_154692935_154692951	0.12123	HOX{A6,A7,B6,B7}.p2	AK048403|C130057N11Rik|99061|RIKEN cDNA C130057N11 gene
mm9_v1_chr2_-_122194653_122194653	0.12109	HOX{A6,A7,B6,B7}.p2	NM_001013829|Shf|435684|Src homology 2 domain containing F
mm9_v1_chr1_+_141318927_141318961	0.121001	HOX{A6,A7,B6,B7}.p2	NM_172643|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog	AK036544|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog
mm9_v1_chr13_-_99660903_99660996	0.120544	HOX{A6,A7,B6,B7}.p2	BC055372|Tnpo1|238799|transportin 1	AK167049|Tnpo1|238799|transportin 1	AK045132|Tnpo1|238799|transportin 1	NM_001048267|Tnpo1|238799|transportin 1
mm9_v1_chr5_-_136849232_136849238	0.120462	HOX{A6,A7,B6,B7}.p2	AF004225|Cux1|13047|cut-like homeobox 1
mm9_v1_chr7_+_20094042_20094114	0.120125	HOX{A6,A7,B6,B7}.p2	BC106114|Trappc6a|67091|trafficking protein particle complex 6A	NM_025960|Trappc6a|67091|trafficking protein particle complex 6A	AK007965|Trappc6a|67091|trafficking protein particle complex 6A	AK008022|Trappc6a|67091|trafficking protein particle complex 6A	AK008462|Trappc6a|67091|trafficking protein particle complex 6A	AK088832|Trappc6a|67091|trafficking protein particle complex 6A	BC020128|Trappc6a|67091|trafficking protein particle complex 6A	AK015839|Trappc6a|67091|trafficking protein particle complex 6A
mm9_v1_chr13_+_58503955_58503963	0.120051	HOX{A6,A7,B6,B7}.p2	NM_001168248|Rmi1|74386|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)	NM_028904|Rmi1|74386|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)	AK016542|Rmi1|74386|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)
mm9_v1_chr7_+_54110679_54110700	0.119839	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_107599446_107599460	0.119815	HOX{A6,A7,B6,B7}.p2	AK004785|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_027892|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm9_v1_chr11_-_73661624_73661624	0.11981	HOX{A6,A7,B6,B7}.p2	NM_147008|Olfr393|259010|olfactory receptor 393
mm9_v1_chr9_-_70351160_70351184	0.119804	HOX{A6,A7,B6,B7}.p2	BC069835|Rnf111|93836|ring finger 111	AK169999|Rnf111|93836|ring finger 111
mm9_v1_chr8_+_4166521_4166600	0.119688	HOX{A6,A7,B6,B7}.p2	AK045240|Evi5l|213027|ecotropic viral integration site 5 like	AK087482|Evi5l|213027|ecotropic viral integration site 5 like	NM_001039578|Evi5l|213027|ecotropic viral integration site 5 like	AK134074|Evi5l|213027|ecotropic viral integration site 5 like	BC042653|Evi5l|213027|ecotropic viral integration site 5 like
mm9_v1_chr10_+_98478207_98478246	0.119581	HOX{A6,A7,B6,B7}.p2	BC025199|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr17_+_46818005_46818130	0.119252	HOX{A6,A7,B6,B7}.p2	AK010863|Mea1|17256|male enhanced antigen 1	AK008305|Mea1|17256|male enhanced antigen 1	AK008194|Mea1|17256|male enhanced antigen 1	AK010904|Mea1|17256|male enhanced antigen 1	AK010962|Mea1|17256|male enhanced antigen 1	AK012617|Mea1|17256|male enhanced antigen 1	AK005369|Mea1|17256|male enhanced antigen 1	AK005106|Mea1|17256|male enhanced antigen 1	L10401|Mea1|17256|male enhanced antigen 1	M27938|Mea1|17256|male enhanced antigen 1	NM_010787|Mea1|17256|male enhanced antigen 1	AK011189|Mea1|17256|male enhanced antigen 1	D17341|Mea1|17256|male enhanced antigen 1
mm9_v1_chr18_+_37649118_37649272	0.119103	HOX{A6,A7,B6,B7}.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr17_-_32421603_32421681	0.119085	HOX{A6,A7,B6,B7}.p2	BC103773|Brd4|57261|bromodomain containing 4	AK042431|Brd4|57261|bromodomain containing 4	BC013666|Brd4|57261|bromodomain containing 4	AK154514|Brd4|57261|bromodomain containing 4
mm9_v1_chr9_+_94570310_94570389	0.119024	HOX{A6,A7,B6,B7}.p2	NM_177909|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK037058|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC153825|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC099942|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK172687|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK156494|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm9_v1_chr8_+_86939262_86939275	0.118878	HOX{A6,A7,B6,B7}.p2	AK147288|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_007578|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147277|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147498|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147697|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr3_+_68298129_68298184	0.118875	HOX{A6,A7,B6,B7}.p2	AK146930|Schip1|30953|schwannomin interacting protein 1	AK168005|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr19_-_8913619_8913779	0.118502	HOX{A6,A7,B6,B7}.p2	BC029680|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK032646|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK004459|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	NM_010316|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3
mm9_v1_chr5_+_122822549_122822598	0.118292	HOX{A6,A7,B6,B7}.p2	AK087968|Gpn3|68080|GPN-loop GTPase 3	AK080720|Gpn3|68080|GPN-loop GTPase 3	AK146783|Gpn3|68080|GPN-loop GTPase 3	AK016996|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr10_+_107599100_107599283	0.118234	HOX{A6,A7,B6,B7}.p2	BC125381|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A	BC137630|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm9_v1_chr4_+_84530230_84530239	0.118187	HOX{A6,A7,B6,B7}.p2	NM_175275|Cntln|338349|centlein, centrosomal protein	NM_177385|Cntln|338349|centlein, centrosomal protein
mm9_v1_chr15_+_74346624_74346672	0.117872	HOX{A6,A7,B6,B7}.p2	AK147607|Bai1|107831|brain-specific angiogenesis inhibitor 1	NM_174991|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147456|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147459|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr10_+_122702444_122702534	0.117829	HOX{A6,A7,B6,B7}.p2	AY325121|Fam19a2|268354|family with sequence similarity 19, member A2
mm9_v1_chr10_-_23506850_23506973	0.1178	HOX{A6,A7,B6,B7}.p2	X15962|Rps12|20042|ribosomal protein S12
mm9_v1_chr5_+_38651466_38651637	0.117715	HOX{A6,A7,B6,B7}.p2	BC025197|Tmem128|66309|transmembrane protein 128	AK012789|Tmem128|66309|transmembrane protein 128	AK013227|Tmem128|66309|transmembrane protein 128	AK080853|Tmem128|66309|transmembrane protein 128	NM_025480|Tmem128|66309|transmembrane protein 128	AK162257|Tmem128|66309|transmembrane protein 128	AK076679|Tmem128|66309|transmembrane protein 128	BC060969|Tmem128|66309|transmembrane protein 128	BC110310|Tmem128|66309|transmembrane protein 128
mm9_v1_chr18_+_37968450_37968553	0.117623	HOX{A6,A7,B6,B7}.p2	AK193109|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr2_-_154196611_154196692	0.117474	HOX{A6,A7,B6,B7}.p2	BC025132|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr2_-_126501326_126501329	0.117385	HOX{A6,A7,B6,B7}.p2	AK040722|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr17_-_48571942_48571962	0.117278	HOX{A6,A7,B6,B7}.p2	AK009047|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2	BC027530|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm9_v1_chr4_+_48197852_48197907	0.116791	HOX{A6,A7,B6,B7}.p2	AK018158|Stx17|67727|syntaxin 17
mm9_v1_chr8_+_107821562_107821689	0.116311	HOX{A6,A7,B6,B7}.p2	BC026649|E2f4|104394|E2F transcription factor 4	NM_148952|E2f4|104394|E2F transcription factor 4	BC027048|E2f4|104394|E2F transcription factor 4	AK145950|E2f4|104394|E2F transcription factor 4	AK157028|E2f4|104394|E2F transcription factor 4	BC023859|E2f4|104394|E2F transcription factor 4	AK183880|E2f4|104394|E2F transcription factor 4
mm9_v1_chr2_-_35973217_35973333	0.116302	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_60591836_60591898	0.116202	HOX{A6,A7,B6,B7}.p2	AK159851|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr6_-_119303490_119303640	0.116029	HOX{A6,A7,B6,B7}.p2	AK003228|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr3_-_78985249_78985262	0.115789	HOX{A6,A7,B6,B7}.p2	AK037061|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr19_-_13890077_13890147	0.115773	HOX{A6,A7,B6,B7}.p2	NM_146796|Olfr1499|258792|olfactory receptor 1499	BC132138|Olfr1499|258792|olfactory receptor 1499
mm9_v1_chr10_+_13273025_13273117	0.115701	HOX{A6,A7,B6,B7}.p2	AK021291|Adat2|66757|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
mm9_v1_chr14_-_73785035_73785066	0.115582	HOX{A6,A7,B6,B7}.p2	AK002599|Itm2b|16432|integral membrane protein 2B	AK153103|Itm2b|16432|integral membrane protein 2B	AK159307|Itm2b|16432|integral membrane protein 2B	AK003224|Itm2b|16432|integral membrane protein 2B	BC004731|Itm2b|16432|integral membrane protein 2B	AK003587|Itm2b|16432|integral membrane protein 2B	AK003928|Itm2b|16432|integral membrane protein 2B	AK088270|Itm2b|16432|integral membrane protein 2B	AK159340|Itm2b|16432|integral membrane protein 2B	AK159426|Itm2b|16432|integral membrane protein 2B	AK159628|Itm2b|16432|integral membrane protein 2B	AK159792|Itm2b|16432|integral membrane protein 2B	AK160101|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr15_-_54109855_54110038	0.115476	HOX{A6,A7,B6,B7}.p2	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr10_+_69903415_69903494	0.115475	HOX{A6,A7,B6,B7}.p2	AK081939|Fam13c|71721|family with sequence similarity 13, member C	NM_001143777|Fam13c|71721|family with sequence similarity 13, member C	AK036299|Fam13c|71721|family with sequence similarity 13, member C	AK039513|Fam13c|71721|family with sequence similarity 13, member C	AK044049|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr7_+_31348317_31348374	0.115258	HOX{A6,A7,B6,B7}.p2	BC060972|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	NM_170760|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	BC051477|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	AF419339|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4
mm9_v1_chr12_+_4850108_4850199	0.1152	HOX{A6,A7,B6,B7}.p2	NM_001170858|BC068281|238037|cDNA sequence BC068281	NM_173416|BC068281|238037|cDNA sequence BC068281	AK163398|BC068281|238037|cDNA sequence BC068281	AK040407|BC068281|238037|cDNA sequence BC068281	BC068281|BC068281|238037|cDNA sequence BC068281	AK155130|BC068281|238037|cDNA sequence BC068281	AK164024|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr9_+_50561381_50561415	0.114995	HOX{A6,A7,B6,B7}.p2	CT010341|Cryab|12955|crystallin, alpha B	M63170|Cryab|12955|crystallin, alpha B
mm9_v1_chr9_-_86775488_86775559	0.114977	HOX{A6,A7,B6,B7}.p2	AK051176|Snap91|20616|synaptosomal-associated protein 91
mm9_v1_chr16_+_31664188_31664368	0.114396	HOX{A6,A7,B6,B7}.p2	AK143780|Dlg1|13383|discs, large homolog 1 (Drosophila)	AY159380|Dlg1|13383|discs, large homolog 1 (Drosophila)
mm9_v1_chr4_+_94406190_94406316	0.11372	HOX{A6,A7,B6,B7}.p2	X67553|Tek|21687|endothelial-specific receptor tyrosine kinase	X71426|Tek|21687|endothelial-specific receptor tyrosine kinase	S67051|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr8_+_79426245_79426406	0.11371	HOX{A6,A7,B6,B7}.p2	BC133713|Nr3c2|110784|nuclear receptor subfamily 3, group C, member 2	NM_001083906|Nr3c2|110784|nuclear receptor subfamily 3, group C, member 2
mm9_v1_chr10_+_79608206_79608223	0.11358	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_+_23898861_23898926	0.113528	HOX{A6,A7,B6,B7}.p2	AK050277|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2	AK040717|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2	NM_144836|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2	AK050184|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2
mm9_v1_chr18_+_37571327_37571327	0.113313	HOX{A6,A7,B6,B7}.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chr1_-_193007202_193007214	0.113032	HOX{A6,A7,B6,B7}.p2	BC019946|Atf3|11910|activating transcription factor 3	NM_007498|Atf3|11910|activating transcription factor 3	AK133965|Atf3|11910|activating transcription factor 3
mm9_v1_chr6_-_126595818_126595818	0.112884	HOX{A6,A7,B6,B7}.p2	NM_010595|Kcna1|16485|potassium voltage-gated channel, shaker-related subfamily, member 1
mm9_v1_chr8_-_109580546_109580561	0.112813	HOX{A6,A7,B6,B7}.p2	AB041610|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr12_+_82732188_82732357	0.112549	HOX{A6,A7,B6,B7}.p2	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr14_-_21365595_21365800	0.112334	HOX{A6,A7,B6,B7}.p2	BC037668|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AK135203|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	M81483|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AB221678|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	BC066000|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	NM_008914|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform
mm9_v1_chr3_-_146394874_146394956	0.112274	HOX{A6,A7,B6,B7}.p2	AK204254|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr11_+_115891591_115891668	0.112023	HOX{A6,A7,B6,B7}.p2	AK077635|Unk|217331|unkempt homolog (Drosophila)	AK046395|Unk|217331|unkempt homolog (Drosophila)	NM_172569|Unk|217331|unkempt homolog (Drosophila)	AK078095|Unk|217331|unkempt homolog (Drosophila)	AK129438|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr12_+_31950252_31950264	0.112011	HOX{A6,A7,B6,B7}.p2	M15525|Lamb1|16777|laminin B1	BC121790|Lamb1|16777|laminin B1
mm9_v1_chr3_-_57496415_57496458	0.111919	HOX{A6,A7,B6,B7}.p2	AK134766|Gm410|242037|predicted gene 410	AK138483|Gm410|242037|predicted gene 410	NM_001033349|Gm410|242037|predicted gene 410
mm9_v1_chr2_+_170557306_170557456	0.111806	HOX{A6,A7,B6,B7}.p2	BC066822|Dok5|76829|docking protein 5	NM_001163686|Dok5|76829|docking protein 5	NM_029761|Dok5|76829|docking protein 5	AK044148|Dok5|76829|docking protein 5	AF418208|Dok5|76829|docking protein 5
mm9_v1_chr11_+_97547236_97547285	0.111347	HOX{A6,A7,B6,B7}.p2	NM_001085500|Cisd3|217149|CDGSH iron sulfur domain 3	BC056217|Cisd3|217149|CDGSH iron sulfur domain 3
mm9_v1_chr19_+_9022763_9022826	0.110956	HOX{A6,A7,B6,B7}.p2	AK003701|Mta2|23942|metastasis-associated gene family, member 2	AK186547|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr13_+_42961598_42961632	0.110531	HOX{A6,A7,B6,B7}.p2	AK139452|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr19_-_11945703_11945794	0.110485	HOX{A6,A7,B6,B7}.p2	NM_001011775|Olfr1419|257938|olfactory receptor 1419	BC147200|Olfr1419|257938|olfactory receptor 1419	BC147201|Olfr1419|257938|olfactory receptor 1419
mm9_v1_chr10_-_58138401_58138443	0.110387	HOX{A6,A7,B6,B7}.p2	BC068315|Edar|13608|ectodysplasin-A receptor	AF160502|Edar|13608|ectodysplasin-A receptor	NM_010100|Edar|13608|ectodysplasin-A receptor
mm9_v1_chr11_-_94900779_94900799	0.110219	HOX{A6,A7,B6,B7}.p2	AK181188|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK192357|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK194016|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK216417|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK218086|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2
mm9_v1_chr2_+_34287544_34287544	0.110161	HOX{A6,A7,B6,B7}.p2	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr4_-_58219559_58219619	0.109983	HOX{A6,A7,B6,B7}.p2	AK045217|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr6_-_87622057_87622161	0.109983	HOX{A6,A7,B6,B7}.p2	BC002179|Aplf|72103|aprataxin and PNKP like factor	AK078805|Aplf|72103|aprataxin and PNKP like factor	AK034191|Aplf|72103|aprataxin and PNKP like factor	AK008513|Aplf|72103|aprataxin and PNKP like factor	NM_001170489|Aplf|72103|aprataxin and PNKP like factor	NM_024251|Aplf|72103|aprataxin and PNKP like factor
mm9_v1_chr3_+_81736518_81736645	0.109747	HOX{A6,A7,B6,B7}.p2	AK143683|Ctso|229445|cathepsin O	AK034490|Ctso|229445|cathepsin O	NM_177662|Ctso|229445|cathepsin O	AK020735|Ctso|229445|cathepsin O	AK040071|Ctso|229445|cathepsin O	AK049470|Ctso|229445|cathepsin O	AK166103|Ctso|229445|cathepsin O	BC098219|Ctso|229445|cathepsin O	AK165930|Ctso|229445|cathepsin O	BC044664|Ctso|229445|cathepsin O
mm9_v1_chr18_+_31919477_31919481	0.109688	HOX{A6,A7,B6,B7}.p2	AK151060|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK054131|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr15_-_98364333_98364415	0.109441	HOX{A6,A7,B6,B7}.p2	BC083325|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene
mm9_v1_chr5_-_134718500_134718616	0.108717	HOX{A6,A7,B6,B7}.p2	AK183312|Gtf2i|14886|general transcription factor II I	AK211276|Gtf2i|14886|general transcription factor II I
mm9_v1_chr1_+_174451244_174451278	0.108001	HOX{A6,A7,B6,B7}.p2	NM_027972|Ccdc19|71870|coiled-coil domain containing 19	AK006449|Ccdc19|71870|coiled-coil domain containing 19	BC151048|Ccdc19|71870|coiled-coil domain containing 19	BC151055|Ccdc19|71870|coiled-coil domain containing 19
mm9_v1_chr14_-_79872206_79872215	0.107883	HOX{A6,A7,B6,B7}.p2	U40746|Wbp4|22380|WW domain binding protein 4
mm9_v1_chr10_+_79389816_79389883	0.107821	HOX{A6,A7,B6,B7}.p2	AK154956|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	NM_007880|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	BC050925|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)
mm9_v1_chr11_-_79344055_79344121	0.107788	HOX{A6,A7,B6,B7}.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr11_+_101115016_101115073	0.107756	HOX{A6,A7,B6,B7}.p2	AK150822|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK082933|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK166008|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK145811|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK162230|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK003715|Vps25|28084|vacuolar protein sorting 25 (yeast)	BC029181|Vps25|28084|vacuolar protein sorting 25 (yeast)	NM_026776|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK002500|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK003877|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK005149|Vps25|28084|vacuolar protein sorting 25 (yeast)
mm9_v1_chr16_+_14705932_14706066	0.107293	HOX{A6,A7,B6,B7}.p2	AK133968|Snai2|20583|snail homolog 2 (Drosophila)	BC062164|Snai2|20583|snail homolog 2 (Drosophila)	NM_011415|Snai2|20583|snail homolog 2 (Drosophila)	U79550|Snai2|20583|snail homolog 2 (Drosophila)	U97059|Snai2|20583|snail homolog 2 (Drosophila)
mm9_v1_chr14_-_46149660_46149750	0.107013	HOX{A6,A7,B6,B7}.p2	BC033436|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK079588|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK166552|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK145030|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK165608|Fermt2|218952|fermitin family homolog 2 (Drosophila)	NM_146054|Fermt2|218952|fermitin family homolog 2 (Drosophila)
mm9_v1_chr3_-_51081421_51081435	0.106996	HOX{A6,A7,B6,B7}.p2	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr4_-_134885357_134885401	0.106794	HOX{A6,A7,B6,B7}.p2	AK219253|Srrm1|51796|serine/arginine repetitive matrix 1
mm9_v1_chr16_-_38712939_38713011	0.105833	HOX{A6,A7,B6,B7}.p2	BC138870|Arhgap31|12549|Rho GTPase activating protein 31	AK170685|Arhgap31|12549|Rho GTPase activating protein 31	AK155729|Arhgap31|12549|Rho GTPase activating protein 31	AK149975|Arhgap31|12549|Rho GTPase activating protein 31	AK150109|Arhgap31|12549|Rho GTPase activating protein 31	AK045213|Arhgap31|12549|Rho GTPase activating protein 31	AK018057|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr3_+_95238342_95238357	0.105706	HOX{A6,A7,B6,B7}.p2	BC012870|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK145415|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr15_+_82005685_82005731	0.105658	HOX{A6,A7,B6,B7}.p2	AK197179|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr19_+_9004106_9004187	0.105407	HOX{A6,A7,B6,B7}.p2	BC023878|Eml3|225898|echinoderm microtubule associated protein like 3	BC022146|Eml3|225898|echinoderm microtubule associated protein like 3	NM_144872|Eml3|225898|echinoderm microtubule associated protein like 3
mm9_v1_chr10_+_127525538_127525558	0.105367	HOX{A6,A7,B6,B7}.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr3_+_115591053_115591114	0.105345	HOX{A6,A7,B6,B7}.p2	AK045127|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK046753|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK034652|Dph5|69740|DPH5 homolog (S. cerevisiae)	BC060372|Dph5|69740|DPH5 homolog (S. cerevisiae)	NM_027193|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK010475|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK045548|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK046024|Dph5|69740|DPH5 homolog (S. cerevisiae)
mm9_v1_chr6_-_83720508_83720522	0.105255	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_123586905_123586945	0.10522	HOX{A6,A7,B6,B7}.p2	AK142284|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK013614|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr11_-_29147217_29147312	0.105194	HOX{A6,A7,B6,B7}.p2	BC005731|Ccdc104|216618|coiled-coil domain containing 104	AK075858|Ccdc104|216618|coiled-coil domain containing 104	NM_025740|Ccdc104|216618|coiled-coil domain containing 104	AK010468|Ccdc104|216618|coiled-coil domain containing 104	AK016479|Ccdc104|216618|coiled-coil domain containing 104
mm9_v1_chr5_-_77543903_77543908	0.105189	HOX{A6,A7,B6,B7}.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr7_-_108112785_108112972	0.105118	HOX{A6,A7,B6,B7}.p2	AX775901|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC064095|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC027331|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008436|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008496|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	NM_183168|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK142680|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6
mm9_v1_chr1_-_93829376_93829378	0.104798	HOX{A6,A7,B6,B7}.p2	AK170461|Hdac4|208727|histone deacetylase 4
mm9_v1_chr6_+_129483432_129483440	0.104748	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_86955909_86956078	0.104485	HOX{A6,A7,B6,B7}.p2	M95603|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	BC055748|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)
mm9_v1_chr10_+_127774872_127774973	0.104229	HOX{A6,A7,B6,B7}.p2	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr16_+_5884885_5884885	0.104206	HOX{A6,A7,B6,B7}.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr5_-_31490075_31490203	0.103594	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_48292705_48292756	0.103456	HOX{A6,A7,B6,B7}.p2	BC126929|Invs|16348|inversin
mm9_v1_chr7_+_100023762_100023966	0.103062	HOX{A6,A7,B6,B7}.p2	NM_028243|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011112|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK051677|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK166282|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011816|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC089575|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK054462|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC055022|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC026424|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)
mm9_v1_chr11_-_55209320_55209338	0.102918	HOX{A6,A7,B6,B7}.p2	AK192259|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr12_+_56937309_56937356	0.102889	HOX{A6,A7,B6,B7}.p2	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr18_+_31793991_31794055	0.102752	HOX{A6,A7,B6,B7}.p2	BC066030|Sap130|269003|Sin3A associated protein	AK034401|Sap130|269003|Sin3A associated protein	AK053675|Sap130|269003|Sin3A associated protein	AK084078|Sap130|269003|Sin3A associated protein	NM_172965|Sap130|269003|Sin3A associated protein
mm9_v1_chrX_+_42444080_42444121	0.102445	HOX{A6,A7,B6,B7}.p2	BC060289|1110059M19Rik|68800|RIKEN cDNA 1110059M19 gene	NM_026841|1110059M19Rik|68800|RIKEN cDNA 1110059M19 gene	BC094615|1110059M19Rik|68800|RIKEN cDNA 1110059M19 gene
mm9_v1_chr11_-_120479218_120479273	0.102289	HOX{A6,A7,B6,B7}.p2	AK166319|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK140458|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK144544|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine
mm9_v1_chr14_+_47451832_47451844	0.10225	HOX{A6,A7,B6,B7}.p2	AK154797|Cgrrf1|68755|cell growth regulator with ring finger domain 1
mm9_v1_chr9_+_51856364_51856507	0.102241	HOX{A6,A7,B6,B7}.p2	BC053417|Rdx|19684|radixin	BC026786|Rdx|19684|radixin	AK016711|Rdx|19684|radixin	AK168449|Rdx|19684|radixin	AK146423|Rdx|19684|radixin	BC002041|Rdx|19684|radixin	X60672|Rdx|19684|radixin
mm9_v1_chr13_-_77230519_77230547	0.102051	HOX{A6,A7,B6,B7}.p2	BC083095|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr2_+_112102082_112102129	0.101952	HOX{A6,A7,B6,B7}.p2	AK004120|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	AK012875|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	NM_025403|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	BC028497|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)
mm9_v1_chr15_+_10107168_10107535	0.101826	HOX{A6,A7,B6,B7}.p2	AK054381|Prlr|19116|prolactin receptor	AK143335|Prlr|19116|prolactin receptor	AK050317|Prlr|19116|prolactin receptor	BC005555|Prlr|19116|prolactin receptor	BC006652|Prlr|19116|prolactin receptor	AK081676|Prlr|19116|prolactin receptor
mm9_v1_chr5_-_122915995_122916040	0.101728	HOX{A6,A7,B6,B7}.p2	AK210339|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr8_-_3625510_3625544	0.101648	HOX{A6,A7,B6,B7}.p2	BC014694|Pcp2|18545|Purkinje cell protein 2 (L7)	BC028982|Pcp2|18545|Purkinje cell protein 2 (L7)	BC024853|Pcp2|18545|Purkinje cell protein 2 (L7)	EU164759|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_001129803|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr5_+_138558132_138558268	0.101645	HOX{A6,A7,B6,B7}.p2	NM_001044703|Zscan21|22697|zinc finger and SCAN domain containing 21	NM_001044704|Zscan21|22697|zinc finger and SCAN domain containing 21	NM_001044705|Zscan21|22697|zinc finger and SCAN domain containing 21	NM_011757|Zscan21|22697|zinc finger and SCAN domain containing 21	AK146776|Zscan21|22697|zinc finger and SCAN domain containing 21	AK146875|Zscan21|22697|zinc finger and SCAN domain containing 21	U41671|Zscan21|22697|zinc finger and SCAN domain containing 21	BC010591|Zscan21|22697|zinc finger and SCAN domain containing 21	D10630|Zscan21|22697|zinc finger and SCAN domain containing 21	X63747|Zscan21|22697|zinc finger and SCAN domain containing 21
mm9_v1_chr12_-_85489188_85489438	0.101514	HOX{A6,A7,B6,B7}.p2	BC116688|Pnma1|70481|paraneoplastic antigen MA1	BC116687|Pnma1|70481|paraneoplastic antigen MA1	AK017476|Pnma1|70481|paraneoplastic antigen MA1	AK028331|Pnma1|70481|paraneoplastic antigen MA1	AK136933|Pnma1|70481|paraneoplastic antigen MA1	NM_027438|Pnma1|70481|paraneoplastic antigen MA1
mm9_v1_chr15_-_63829523_63829656	0.101514	HOX{A6,A7,B6,B7}.p2	BC011343|Fam49b|223601|family with sequence similarity 49, member B
mm9_v1_chr17_+_87762817_87762839	0.101492	HOX{A6,A7,B6,B7}.p2	BC057906|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr16_-_45742890_45742979	0.101414	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_73282270_73282383	0.101265	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_100158783_100158821	0.101188	HOX{A6,A7,B6,B7}.p2	NM_029553|Ttc8|76260|tetratricopeptide repeat domain 8	AK002597|Ttc8|76260|tetratricopeptide repeat domain 8	AK032748|Ttc8|76260|tetratricopeptide repeat domain 8	AK081697|Ttc8|76260|tetratricopeptide repeat domain 8	BC017523|Ttc8|76260|tetratricopeptide repeat domain 8	NM_198311|Ttc8|76260|tetratricopeptide repeat domain 8
mm9_v1_chr3_+_66789859_66789903	0.101142	HOX{A6,A7,B6,B7}.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr7_-_89079168_89079313	0.101117	HOX{A6,A7,B6,B7}.p2	AK014849|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK044858|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK051401|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK135495|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr10_+_24589791_24589858	0.100663	HOX{A6,A7,B6,B7}.p2	NM_001166416|Med23|70208|mediator complex subunit 23	NM_027347|Med23|70208|mediator complex subunit 23	AK028545|Med23|70208|mediator complex subunit 23	AK042346|Med23|70208|mediator complex subunit 23	AF507918|Med23|70208|mediator complex subunit 23	BC050916|Med23|70208|mediator complex subunit 23	BC040398|Med23|70208|mediator complex subunit 23	AK129312|Med23|70208|mediator complex subunit 23
mm9_v1_chr11_+_94426358_94426387	0.100593	HOX{A6,A7,B6,B7}.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr2_-_119488522_119488567	0.100557	HOX{A6,A7,B6,B7}.p2	AK010328|Ndufaf1|69702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK050343|Ndufaf1|69702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	NM_027175|Ndufaf1|69702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	BC018422|Ndufaf1|69702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
mm9_v1_chr17_+_34784077_34784176	0.100493	HOX{A6,A7,B6,B7}.p2	BC013534|Atf6b|12915|activating transcription factor 6 beta	AK146671|Atf6b|12915|activating transcription factor 6 beta	NM_017406|Atf6b|12915|activating transcription factor 6 beta	AK090378|Atf6b|12915|activating transcription factor 6 beta	BC052635|Atf6b|12915|activating transcription factor 6 beta	AK159169|Atf6b|12915|activating transcription factor 6 beta	AK170027|Atf6b|12915|activating transcription factor 6 beta	AK143765|Atf6b|12915|activating transcription factor 6 beta
mm9_v1_chr12_-_13227172_13227259	0.100321	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_74495269_74495330	0.100095	HOX{A6,A7,B6,B7}.p2	BC147792|Rtdr1|71236|rhabdoid tumor deletion region gene 1	BC147801|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163534|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163535|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK017008|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK077078|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163533|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_027730|Rtdr1|71236|rhabdoid tumor deletion region gene 1
mm9_v1_chr16_-_84735425_84735537	0.100052	HOX{A6,A7,B6,B7}.p2	BC012274|Mrpl39|27393|mitochondrial ribosomal protein L39	NM_017404|Mrpl39|27393|mitochondrial ribosomal protein L39	AF239728|Mrpl39|27393|mitochondrial ribosomal protein L39	AK031942|Mrpl39|27393|mitochondrial ribosomal protein L39	BC016561|Mrpl39|27393|mitochondrial ribosomal protein L39	BC036276|Mrpl39|27393|mitochondrial ribosomal protein L39	AK007681|Mrpl39|27393|mitochondrial ribosomal protein L39
mm9_v1_chr14_-_76956664_76956695	0.10002	HOX{A6,A7,B6,B7}.p2	BC100483|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	BC115492|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	BC115493|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2
mm9_v1_chr11_-_97561650_97561666	0.0994157	HOX{A6,A7,B6,B7}.p2	D90085|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr11_+_73416083_73416083	0.0993605	HOX{A6,A7,B6,B7}.p2	NM_207224|Olfr384|193053|olfactory receptor 384
mm9_v1_chr1_-_88567078_88567149	0.0993433	HOX{A6,A7,B6,B7}.p2	BC111834|Nppc|18159|natriuretic peptide type C	AK036176|Nppc|18159|natriuretic peptide type C	NM_010933|Nppc|18159|natriuretic peptide type C	AK020093|Nppc|18159|natriuretic peptide type C
mm9_v1_chr1_-_94348610_94348663	0.0993066	HOX{A6,A7,B6,B7}.p2	AK203226|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr15_+_35301285_35301305	0.0992453	HOX{A6,A7,B6,B7}.p2	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr14_+_67487686_67487690	0.099238	HOX{A6,A7,B6,B7}.p2	AK135012|Gm5464|432870|predicted gene 5464	NM_001034881|Gm5464|432870|predicted gene 5464	BC147346|Gm5464|432870|predicted gene 5464	BC147347|Gm5464|432870|predicted gene 5464
mm9_v1_chr7_+_110368156_110368233	0.098961	HOX{A6,A7,B6,B7}.p2	BC141016|Olfr594|258246|olfactory receptor 594	NM_207143|Olfr594|258246|olfactory receptor 594
mm9_v1_chr18_+_36508277_36508452	0.0988959	HOX{A6,A7,B6,B7}.p2	NM_001081365|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	BC028765|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK167679|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK002512|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK028217|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK089711|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr2_-_7317824_7317824	0.0986704	HOX{A6,A7,B6,B7}.p2	AK160861|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110231|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr9_-_108962219_108962241	0.0986332	HOX{A6,A7,B6,B7}.p2	AF319574|Trex1|22040|three prime repair exonuclease 1	AF151106|Trex1|22040|three prime repair exonuclease 1	NM_011637|Trex1|22040|three prime repair exonuclease 1	BC011133|Trex1|22040|three prime repair exonuclease 1
mm9_v1_chr1_+_37486981_37487095	0.0985766	HOX{A6,A7,B6,B7}.p2	AK132757|Unc50|67387|unc-50 homolog (C. elegans)	NM_026123|Unc50|67387|unc-50 homolog (C. elegans)	AK135885|Unc50|67387|unc-50 homolog (C. elegans)	AK003273|Unc50|67387|unc-50 homolog (C. elegans)	AY017214|Unc50|67387|unc-50 homolog (C. elegans)	AK004433|Unc50|67387|unc-50 homolog (C. elegans)	BC019484|Unc50|67387|unc-50 homolog (C. elegans)
mm9_v1_chr4_+_135728600_135728662	0.0984653	HOX{A6,A7,B6,B7}.p2	BC062101|E2f2|242705|E2F transcription factor 2
mm9_v1_chr10_+_20067606_20067641	0.0978935	HOX{A6,A7,B6,B7}.p2	NM_027930|Fam54a|71804|family with sequence similarity 54, member A	BC019132|Fam54a|71804|family with sequence similarity 54, member A	AK011410|Fam54a|71804|family with sequence similarity 54, member A
mm9_v1_chr9_-_89599660_89599893	0.0978778	HOX{A6,A7,B6,B7}.p2	BC023338|Tmed3|66111|transmembrane emp24 domain containing 3	AK007544|Tmed3|66111|transmembrane emp24 domain containing 3	AK002698|Tmed3|66111|transmembrane emp24 domain containing 3	AK004545|Tmed3|66111|transmembrane emp24 domain containing 3	NM_025360|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr11_-_106077627_106077641	0.097435	HOX{A6,A7,B6,B7}.p2	AK132273|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr3_+_146067763_146067821	0.0973787	HOX{A6,A7,B6,B7}.p2	AK077112|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein
mm9_v1_chr1_+_37276049_37276106	0.0973017	HOX{A6,A7,B6,B7}.p2	AJ243933|Cnga3|12790|cyclic nucleotide gated channel alpha 3	BC035272|Cnga3|12790|cyclic nucleotide gated channel alpha 3	NM_009918|Cnga3|12790|cyclic nucleotide gated channel alpha 3	BC049145|Cnga3|12790|cyclic nucleotide gated channel alpha 3
mm9_v1_chr13_-_114408704_114408818	0.0969524	HOX{A6,A7,B6,B7}.p2	AK052343|Snx18|170625|sorting nexin 18	BC137801|Snx18|170625|sorting nexin 18	BC145951|Snx18|170625|sorting nexin 18	AF408408|Snx18|170625|sorting nexin 18	AK155955|Snx18|170625|sorting nexin 18	AK143645|Snx18|170625|sorting nexin 18	BC063089|Snx18|170625|sorting nexin 18	NM_130796|Snx18|170625|sorting nexin 18
mm9_v1_chr5_-_72978788_72978788	0.0966784	HOX{A6,A7,B6,B7}.p2	AK084047|Gm5868|545758|predicted gene 5868	NM_001024147|Gm5868|545758|predicted gene 5868
mm9_v1_chr4_+_151413427_151413471	0.096545	HOX{A6,A7,B6,B7}.p2	AK047599|Nol9|74035|nucleolar protein 9	AK164493|Nol9|74035|nucleolar protein 9	NM_001159599|Nol9|74035|nucleolar protein 9	NM_028727|Nol9|74035|nucleolar protein 9	BC024877|Nol9|74035|nucleolar protein 9	AK172043|Nol9|74035|nucleolar protein 9	AK014568|Nol9|74035|nucleolar protein 9	AK050948|Nol9|74035|nucleolar protein 9	AK157956|Nol9|74035|nucleolar protein 9	BC125432|Nol9|74035|nucleolar protein 9	BC132099|Nol9|74035|nucleolar protein 9	AK157398|Nol9|74035|nucleolar protein 9	AK079935|Nol9|74035|nucleolar protein 9	AK046761|Nol9|74035|nucleolar protein 9	BC096599|Nol9|74035|nucleolar protein 9	AK042581|Nol9|74035|nucleolar protein 9	BC051109|Nol9|74035|nucleolar protein 9
mm9_v1_chr15_-_79085177_79085186	0.0965286	HOX{A6,A7,B6,B7}.p2	BC018216|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8	NM_020516|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8	AF019111|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm9_v1_chr4_-_58219478_58219506	0.0963093	HOX{A6,A7,B6,B7}.p2	AK035333|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AK087058|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr9_-_58050340_58050340	0.0961948	HOX{A6,A7,B6,B7}.p2	NM_001161538|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr17_-_31266539_31266557	0.0961718	HOX{A6,A7,B6,B7}.p2	BC011042|Tff3|21786|trefoil factor 3, intestinal	AK008538|Tff3|21786|trefoil factor 3, intestinal	D38410|Tff3|21786|trefoil factor 3, intestinal	NM_011575|Tff3|21786|trefoil factor 3, intestinal
mm9_v1_chr8_-_48373564_48373676	0.0960568	HOX{A6,A7,B6,B7}.p2	BC099949|Stox2|71069|storkhead box 2
mm9_v1_chr10_+_80640797_80640924	0.0959159	HOX{A6,A7,B6,B7}.p2	AK177243|Eef2|13629|eukaryotic translation elongation factor 2	AK177449|Eef2|13629|eukaryotic translation elongation factor 2	AK177635|Eef2|13629|eukaryotic translation elongation factor 2	AK177968|Eef2|13629|eukaryotic translation elongation factor 2	AK179641|Eef2|13629|eukaryotic translation elongation factor 2	AK183034|Eef2|13629|eukaryotic translation elongation factor 2	AK183828|Eef2|13629|eukaryotic translation elongation factor 2	AK184191|Eef2|13629|eukaryotic translation elongation factor 2	AK185734|Eef2|13629|eukaryotic translation elongation factor 2	AK186233|Eef2|13629|eukaryotic translation elongation factor 2	AK187409|Eef2|13629|eukaryotic translation elongation factor 2	AK187428|Eef2|13629|eukaryotic translation elongation factor 2	AK189320|Eef2|13629|eukaryotic translation elongation factor 2	AK190038|Eef2|13629|eukaryotic translation elongation factor 2	AK190551|Eef2|13629|eukaryotic translation elongation factor 2	AK190576|Eef2|13629|eukaryotic translation elongation factor 2	AK191388|Eef2|13629|eukaryotic translation elongation factor 2	AK195336|Eef2|13629|eukaryotic translation elongation factor 2	AK195451|Eef2|13629|eukaryotic translation elongation factor 2	AK195765|Eef2|13629|eukaryotic translation elongation factor 2	AK195886|Eef2|13629|eukaryotic translation elongation factor 2	AK196469|Eef2|13629|eukaryotic translation elongation factor 2	AK197149|Eef2|13629|eukaryotic translation elongation factor 2	AK197382|Eef2|13629|eukaryotic translation elongation factor 2	AK198391|Eef2|13629|eukaryotic translation elongation factor 2	AK199253|Eef2|13629|eukaryotic translation elongation factor 2	AK202872|Eef2|13629|eukaryotic translation elongation factor 2	AK202975|Eef2|13629|eukaryotic translation elongation factor 2	AK204335|Eef2|13629|eukaryotic translation elongation factor 2	AK204966|Eef2|13629|eukaryotic translation elongation factor 2	AK208256|Eef2|13629|eukaryotic translation elongation factor 2	AK212045|Eef2|13629|eukaryotic translation elongation factor 2	AK212561|Eef2|13629|eukaryotic translation elongation factor 2	AK214023|Eef2|13629|eukaryotic translation elongation factor 2	AK214991|Eef2|13629|eukaryotic translation elongation factor 2	AK216014|Eef2|13629|eukaryotic translation elongation factor 2	AK219284|Eef2|13629|eukaryotic translation elongation factor 2	AK220087|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr8_+_36739938_36739980	0.0958649	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_41408529_41408643	0.095684	HOX{A6,A7,B6,B7}.p2	BC038026|Phf17|269424|PHD finger protein 17
mm9_v1_chrX_-_45562050_45562056	0.095569	HOX{A6,A7,B6,B7}.p2	BC090832|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr11_-_20612281_20612323	0.0954423	HOX{A6,A7,B6,B7}.p2	AK150458|Aftph|216549|aftiphilin	AK152308|Aftph|216549|aftiphilin	AK152487|Aftph|216549|aftiphilin	AK161532|Aftph|216549|aftiphilin
mm9_v1_chr11_-_102680999_102681013	0.0952954	HOX{A6,A7,B6,B7}.p2	BC071230|Gjc1|14615|gap junction protein, gamma 1	NM_001159383|Gjc1|14615|gap junction protein, gamma 1	AY390396|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr8_+_108160437_108160479	0.095282	HOX{A6,A7,B6,B7}.p2	NM_181322|Ctcf|13018|CCCTC-binding factor	U51037|Ctcf|13018|CCCTC-binding factor	BC037456|Ctcf|13018|CCCTC-binding factor	AK140164|Ctcf|13018|CCCTC-binding factor	BC009129|Ctcf|13018|CCCTC-binding factor	BC024382|Ctcf|13018|CCCTC-binding factor	BC049131|Ctcf|13018|CCCTC-binding factor	AK076192|Ctcf|13018|CCCTC-binding factor
mm9_v1_chr15_+_78860043_78860112	0.0951543	HOX{A6,A7,B6,B7}.p2	AK195119|H1f0|14958|H1 histone family, member 0
mm9_v1_chr11_-_97914582_97914775	0.094885	HOX{A6,A7,B6,B7}.p2	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr10_+_127774845_127774868	0.0946762	HOX{A6,A7,B6,B7}.p2	AK166814|Cs|12974|citrate synthase	AK012151|Cs|12974|citrate synthase	AK145643|Cs|12974|citrate synthase	AK167125|Cs|12974|citrate synthase	AK163273|Cs|12974|citrate synthase
mm9_v1_chr5_-_149364273_149364347	0.0946372	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_102254949_102254989	0.0945349	HOX{A6,A7,B6,B7}.p2	U73941|Rundc3a|51799|RUN domain containing 3A
mm9_v1_chr1_+_75233046_75233098	0.0944922	HOX{A6,A7,B6,B7}.p2	AK171494|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	AK076061|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr4_-_43512476_43512545	0.0944453	HOX{A6,A7,B6,B7}.p2	AK087493|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	BC080700|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	AK153880|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	NM_001013377|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene
mm9_v1_chr5_-_73647814_73647839	0.0944051	HOX{A6,A7,B6,B7}.p2	AK171992|Fryl|72313|furry homolog-like (Drosophila)
mm9_v1_chr9_+_120864938_120864992	0.0944005	HOX{A6,A7,B6,B7}.p2	AK219273|Ctnnb1|12387|catenin (cadherin associated protein), beta 1
mm9_v1_chr8_-_81032819_81032836	0.0942732	HOX{A6,A7,B6,B7}.p2	NM_009033|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr1_-_195068455_195068557	0.0941562	HOX{A6,A7,B6,B7}.p2	DQ089001|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	S75207|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK149518|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK165212|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_001044751|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr4_-_63681749_63681759	0.0941453	HOX{A6,A7,B6,B7}.p2	BC117979|Tnc|21923|tenascin C	BC117980|Tnc|21923|tenascin C	NM_011607|Tnc|21923|tenascin C	X56304|Tnc|21923|tenascin C
mm9_v1_chr15_+_25870456_25870763	0.0940888	HOX{A6,A7,B6,B7}.p2	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr6_-_149050067_149050107	0.0940394	HOX{A6,A7,B6,B7}.p2	AK135015|Dennd5b|320560|DENN/MADD domain containing 5B	AK038858|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr18_-_35559717_35559861	0.0940174	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_149494799_149494830	0.093865	HOX{A6,A7,B6,B7}.p2	BC023500|Slc2a5|56485|solute carrier family 2 (facilitated glucose transporter), member 5	AF161071|Slc2a5|56485|solute carrier family 2 (facilitated glucose transporter), member 5
mm9_v1_chr17_-_45708739_45708860	0.0937409	HOX{A6,A7,B6,B7}.p2	AK177268|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK178129|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK179913|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK180968|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK190429|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196204|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK218770|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr9_+_86636433_86636473	0.0936416	HOX{A6,A7,B6,B7}.p2	NM_178738|Prss35|244954|protease, serine, 35	AK030671|Prss35|244954|protease, serine, 35	AK031411|Prss35|244954|protease, serine, 35	AK031644|Prss35|244954|protease, serine, 35	AK076281|Prss35|244954|protease, serine, 35	BC075675|Prss35|244954|protease, serine, 35	DQ223037|Prss35|244954|protease, serine, 35
mm9_v1_chr11_+_69832336_69832365	0.0933977	HOX{A6,A7,B6,B7}.p2	BC014807|Dlg4|13385|discs, large homolog 4 (Drosophila)	D50621|Dlg4|13385|discs, large homolog 4 (Drosophila)
mm9_v1_chr8_-_96560811_96560953	0.0932253	HOX{A6,A7,B6,B7}.p2	AK204985|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC090834|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK146419|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK160147|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK012308|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK020150|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK019433|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK147061|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC008270|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK011688|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_026623|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm9_v1_chr7_+_129210847_129210947	0.0931033	HOX{A6,A7,B6,B7}.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chrX_-_71674201_71674273	0.0930856	HOX{A6,A7,B6,B7}.p2	Z11911|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK088135|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK148031|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK165207|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked
mm9_v1_chr15_-_36538288_36538422	0.0927906	HOX{A6,A7,B6,B7}.p2	BC023145|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003870|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr1_-_58558259_58558259	0.0925314	HOX{A6,A7,B6,B7}.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr8_+_4238718_4238771	0.0923407	HOX{A6,A7,B6,B7}.p2	NM_001042557|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_001164172|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_011944|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022112|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022113|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr18_+_23656024_23656160	0.0922248	HOX{A6,A7,B6,B7}.p2	AK147359|Dtna|13527|dystrobrevin alpha	BC050765|Dtna|13527|dystrobrevin alpha	AK131649|Dtna|13527|dystrobrevin alpha	X95226|Dtna|13527|dystrobrevin alpha
mm9_v1_chr19_-_41289262_41289457	0.0922215	HOX{A6,A7,B6,B7}.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr7_-_26004870_26004903	0.0921211	HOX{A6,A7,B6,B7}.p2	AK043908|Dedd2|67379|death effector domain-containing DNA binding protein 2	BC092250|Dedd2|67379|death effector domain-containing DNA binding protein 2	NM_207677|Dedd2|67379|death effector domain-containing DNA binding protein 2	AK135320|Dedd2|67379|death effector domain-containing DNA binding protein 2
mm9_v1_chr2_+_158235682_158235701	0.0920866	HOX{A6,A7,B6,B7}.p2	BC138377|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)	BC145260|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)
mm9_v1_chr11_+_116976475_116976498	0.0919863	HOX{A6,A7,B6,B7}.p2	AK047396|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166506|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166507|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_028777|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr11_+_29426434_29426502	0.0919613	HOX{A6,A7,B6,B7}.p2	AK136344|Mtif2|76784|mitochondrial translational initiation factor 2	AK160724|Mtif2|76784|mitochondrial translational initiation factor 2	AK019087|Mtif2|76784|mitochondrial translational initiation factor 2	AK010766|Mtif2|76784|mitochondrial translational initiation factor 2	AK146961|Mtif2|76784|mitochondrial translational initiation factor 2	NM_133767|Mtif2|76784|mitochondrial translational initiation factor 2	BC016590|Mtif2|76784|mitochondrial translational initiation factor 2	BC066819|Mtif2|76784|mitochondrial translational initiation factor 2
mm9_v1_chr10_+_69388242_69388279	0.0918226	HOX{A6,A7,B6,B7}.p2	L40631|Ank3|11735|ankyrin 3, epithelial	NM_009670|Ank3|11735|ankyrin 3, epithelial	NM_170687|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr5_-_129459236_129459360	0.0916955	HOX{A6,A7,B6,B7}.p2	NM_001081388|Rimbp2|231760|RIMS binding protein 2	AK044685|Rimbp2|231760|RIMS binding protein 2
mm9_v1_chr1_-_163718415_163718625	0.0914569	HOX{A6,A7,B6,B7}.p2	AF288572|Fasl|14103|Fas ligand (TNF superfamily, member 6)	DQ846747|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U58995|Fasl|14103|Fas ligand (TNF superfamily, member 6)	S76752|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AF119335|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U06948|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U10984|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK141268|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK040139|Fasl|14103|Fas ligand (TNF superfamily, member 6)	NM_010177|Fasl|14103|Fas ligand (TNF superfamily, member 6)
mm9_v1_chr5_-_138042267_138042299	0.0913533	HOX{A6,A7,B6,B7}.p2	BC039620|Mospd3|68929|motile sperm domain containing 3	NM_030037|Mospd3|68929|motile sperm domain containing 3	BC034167|Mospd3|68929|motile sperm domain containing 3
mm9_v1_chr10_+_61912236_61912284	0.0910782	HOX{A6,A7,B6,B7}.p2	AK135283|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene	AK042417|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene	AK054359|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene	BC019469|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene
mm9_v1_chr11_-_120422109_120422348	0.0910689	HOX{A6,A7,B6,B7}.p2	AK199305|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK207358|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK215989|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK192153|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198572|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK194021|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK197388|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198858|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK199711|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK200927|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr4_-_132478424_132478474	0.0909798	HOX{A6,A7,B6,B7}.p2	BC008163|Fam76a|230789|family with sequence similarity 76, member A	AK154575|Fam76a|230789|family with sequence similarity 76, member A	NM_001163792|Fam76a|230789|family with sequence similarity 76, member A	NM_145553|Fam76a|230789|family with sequence similarity 76, member A	AK038831|Fam76a|230789|family with sequence similarity 76, member A
mm9_v1_chr14_+_35148567_35148593	0.0909616	HOX{A6,A7,B6,B7}.p2	AK213533|Glud1|14661|glutamate dehydrogenase 1
mm9_v1_chr13_+_118009379_118009441	0.0909354	HOX{A6,A7,B6,B7}.p2	NM_010330|Emb|13723|embigin	AK138271|Emb|13723|embigin	AK079570|Emb|13723|embigin
mm9_v1_chr9_+_18925400_18925400	0.0908202	HOX{A6,A7,B6,B7}.p2	BC106988|Olfr836|258557|olfactory receptor 836	BC106989|Olfr836|258557|olfactory receptor 836	NM_146564|Olfr836|258557|olfactory receptor 836
mm9_v1_chr4_+_108534484_108534486	0.0906853	HOX{A6,A7,B6,B7}.p2	AK200396|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)
mm9_v1_chr7_+_82600419_82600490	0.0905052	HOX{A6,A7,B6,B7}.p2	NM_029332|Akap13|75547|A kinase (PRKA) anchor protein 13	AK157986|Akap13|75547|A kinase (PRKA) anchor protein 13	AK172125|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chr4_-_106136929_106136933	0.0903882	HOX{A6,A7,B6,B7}.p2	NM_153565|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9	BC038085|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9
mm9_v1_chr7_-_20218609_20218735	0.0903869	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_8617550_8617602	0.0902994	HOX{A6,A7,B6,B7}.p2	AK171857|Chd7|320790|chromodomain helicase DNA binding protein 7	AK172025|Chd7|320790|chromodomain helicase DNA binding protein 7
mm9_v1_chr8_-_11312686_11312717	0.0902554	HOX{A6,A7,B6,B7}.p2	BC072650|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr3_+_95965892_95965939	0.090235	HOX{A6,A7,B6,B7}.p2	NM_181409|Mtmr11|194126|myotubularin related protein 11	AK132375|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr14_+_14503389_14503389	0.0902154	HOX{A6,A7,B6,B7}.p2	AK040281|Sntn|218739|sentan, cilia apical structure protein	BC126945|Sntn|218739|sentan, cilia apical structure protein	NM_177624|Sntn|218739|sentan, cilia apical structure protein
mm9_v1_chr4_-_43053029_43053168	0.0901702	HOX{A6,A7,B6,B7}.p2	AK149610|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	AK154748|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	BC046771|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chr3_+_68673489_68673528	0.089969	HOX{A6,A7,B6,B7}.p2	NM_001167996|1110032F04Rik|68725|RIKEN cDNA 1110032F04 gene
mm9_v1_chr1_-_164790079_164790095	0.0898966	HOX{A6,A7,B6,B7}.p2	AK042457|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr15_-_5058532_5058532	0.0898589	HOX{A6,A7,B6,B7}.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr11_+_119352660_119352688	0.0898522	HOX{A6,A7,B6,B7}.p2	AK084233|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	NM_001164636|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK084548|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr6_+_30758582_30758676	0.0897418	HOX{A6,A7,B6,B7}.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr5_-_137462712_137462731	0.0897353	HOX{A6,A7,B6,B7}.p2	BC026751|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr11_-_106243873_106243954	0.0897165	HOX{A6,A7,B6,B7}.p2	AK007801|Icam2|15896|intercellular adhesion molecule 2	BC039128|Icam2|15896|intercellular adhesion molecule 2	BC039970|Icam2|15896|intercellular adhesion molecule 2	NM_010494|Icam2|15896|intercellular adhesion molecule 2	X65493|Icam2|15896|intercellular adhesion molecule 2
mm9_v1_chr11_+_75007300_75007314	0.0896184	HOX{A6,A7,B6,B7}.p2	BC030471|Rtn4rl1|237847|reticulon 4 receptor-like 1
mm9_v1_chr18_-_34784463_34784463	0.0894713	HOX{A6,A7,B6,B7}.p2	NM_030147|Brd8|78656|bromodomain containing 8
mm9_v1_chr11_+_88835235_88835270	0.0894638	HOX{A6,A7,B6,B7}.p2	NM_016706|Coil|12812|coilin	AK146366|Coil|12812|coilin	AF208663|Coil|12812|coilin
mm9_v1_chr16_-_23127779_23127814	0.0893834	HOX{A6,A7,B6,B7}.p2	AK146954|Rfc4|106344|replication factor C (activator 1) 4	AK147030|Rfc4|106344|replication factor C (activator 1) 4	BC003335|Rfc4|106344|replication factor C (activator 1) 4	NM_145480|Rfc4|106344|replication factor C (activator 1) 4
mm9_v1_chr5_+_27143896_27143973	0.0892695	HOX{A6,A7,B6,B7}.p2	AF092507|Dpp6|13483|dipeptidylpeptidase 6	NM_010075|Dpp6|13483|dipeptidylpeptidase 6	AK082186|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr4_-_71861939_71861956	0.0891244	HOX{A6,A7,B6,B7}.p2	NM_011599|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm9_v1_chr7_+_80885223_80885308	0.089116	HOX{A6,A7,B6,B7}.p2	BC034069|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr1_-_136700389_136700428	0.0891004	HOX{A6,A7,B6,B7}.p2	AK035285|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr19_+_29064837_29064856	0.0889451	HOX{A6,A7,B6,B7}.p2	AK016651|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK076231|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK078468|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK165398|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr17_+_34056367_34056478	0.0888103	HOX{A6,A7,B6,B7}.p2	NM_001025313|Tapbp|21356|TAP binding protein	NM_009318|Tapbp|21356|TAP binding protein
mm9_v1_chr6_-_71582562_71582698	0.0885774	HOX{A6,A7,B6,B7}.p2	BC059264|Kdm3a|104263|lysine (K)-specific demethylase 3A	AK144825|Kdm3a|104263|lysine (K)-specific demethylase 3A	NM_173001|Kdm3a|104263|lysine (K)-specific demethylase 3A
mm9_v1_chr3_+_86028611_86028623	0.0885653	HOX{A6,A7,B6,B7}.p2	AF187731|Lrba|80877|LPS-responsive beige-like anchor	AF188506|Lrba|80877|LPS-responsive beige-like anchor	AF188507|Lrba|80877|LPS-responsive beige-like anchor	NM_001077687|Lrba|80877|LPS-responsive beige-like anchor	NM_001077688|Lrba|80877|LPS-responsive beige-like anchor	NM_030695|Lrba|80877|LPS-responsive beige-like anchor	AK085208|Lrba|80877|LPS-responsive beige-like anchor
mm9_v1_chr7_-_125263314_125263384	0.0885617	HOX{A6,A7,B6,B7}.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr5_-_100392845_100392900	0.0883524	HOX{A6,A7,B6,B7}.p2	AK053251|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr14_+_121325421_121325483	0.0882202	HOX{A6,A7,B6,B7}.p2	BC020012|Ipo5|70572|importin 5
mm9_v1_chr15_-_76476688_76476767	0.0880628	HOX{A6,A7,B6,B7}.p2	AK028994|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr16_+_45094214_45094287	0.0879784	HOX{A6,A7,B6,B7}.p2	AB075019|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr4_-_118966945_118967127	0.0877059	HOX{A6,A7,B6,B7}.p2	X57621|Ybx1|22608|Y box protein 1	M62867|Ybx1|22608|Y box protein 1	U33196|Ybx1|22608|Y box protein 1	BC029747|Ybx1|22608|Y box protein 1	BC013620|Ybx1|22608|Y box protein 1	M60419|Ybx1|22608|Y box protein 1	BC061634|Ybx1|22608|Y box protein 1	BC031472|Ybx1|22608|Y box protein 1	BC049977|Ybx1|22608|Y box protein 1	BC013450|Ybx1|22608|Y box protein 1	AK011890|Ybx1|22608|Y box protein 1	AK150821|Ybx1|22608|Y box protein 1	NM_011732|Ybx1|22608|Y box protein 1
mm9_v1_chr3_+_95733228_95733353	0.0874829	HOX{A6,A7,B6,B7}.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_+_164323044_164323060	0.087044	HOX{A6,A7,B6,B7}.p2	AK162573|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	BC016520|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	BC034175|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr2_-_126719808_126719853	0.0869007	HOX{A6,A7,B6,B7}.p2	AK080421|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	AK081953|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr11_+_87862035_87862148	0.0868237	HOX{A6,A7,B6,B7}.p2	AK187083|Srsf1|110809|serine/arginine-rich splicing factor 1
mm9_v1_chr14_-_66696533_66696571	0.0866774	HOX{A6,A7,B6,B7}.p2	AK161261|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK161266|Adam2|11495|a disintegrin and metallopeptidase domain 2	U16242|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK016550|Adam2|11495|a disintegrin and metallopeptidase domain 2	NM_009618|Adam2|11495|a disintegrin and metallopeptidase domain 2	U38806|Adam2|11495|a disintegrin and metallopeptidase domain 2
mm9_v1_chr5_+_117827904_117828056	0.08651	HOX{A6,A7,B6,B7}.p2	AK195234|Wsb2|59043|WD repeat and SOCS box-containing 2	AK198504|Wsb2|59043|WD repeat and SOCS box-containing 2	AK206996|Wsb2|59043|WD repeat and SOCS box-containing 2	AK210681|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chrX_-_163768423_163768472	0.0864874	HOX{A6,A7,B6,B7}.p2	AF334943|Tlr7|170743|toll-like receptor 7	AF334942|Tlr7|170743|toll-like receptor 7	AK036549|Tlr7|170743|toll-like receptor 7	AK154906|Tlr7|170743|toll-like receptor 7	NM_133211|Tlr7|170743|toll-like receptor 7	AK156908|Tlr7|170743|toll-like receptor 7
mm9_v1_chr1_+_173770709_173770788	0.0864721	HOX{A6,A7,B6,B7}.p2	NM_013489|Cd84|12523|CD84 antigen	AF043445|Cd84|12523|CD84 antigen	AK171067|Cd84|12523|CD84 antigen	AK037385|Cd84|12523|CD84 antigen	AK040694|Cd84|12523|CD84 antigen	AK156464|Cd84|12523|CD84 antigen	AK157075|Cd84|12523|CD84 antigen	BC140952|Cd84|12523|CD84 antigen	BC144736|Cd84|12523|CD84 antigen	AK154834|Cd84|12523|CD84 antigen	AB196812|Cd84|12523|CD84 antigen	AB196813|Cd84|12523|CD84 antigen	AB196814|Cd84|12523|CD84 antigen	AB196815|Cd84|12523|CD84 antigen
mm9_v1_chr4_-_22415277_22415277	0.0863674	HOX{A6,A7,B6,B7}.p2	NM_008899|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr2_-_20889276_20889347	0.0861836	HOX{A6,A7,B6,B7}.p2	BC150741|Arhgap21|71435|Rho GTPase activating protein 21	BC076629|Arhgap21|71435|Rho GTPase activating protein 21	NM_001081364|Arhgap21|71435|Rho GTPase activating protein 21	NM_001128084|Arhgap21|71435|Rho GTPase activating protein 21
mm9_v1_chr2_+_32087125_32087136	0.0861788	HOX{A6,A7,B6,B7}.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr11_-_83462722_83462879	0.0860846	HOX{A6,A7,B6,B7}.p2	AK153155|Ccl3|20302|chemokine (C-C motif) ligand 3	EU366956|Ccl3|20302|chemokine (C-C motif) ligand 3	BC111443|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065939|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065940|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065941|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065942|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065943|Ccl3|20302|chemokine (C-C motif) ligand 3	J04491|Ccl3|20302|chemokine (C-C motif) ligand 3	X12531|Ccl3|20302|chemokine (C-C motif) ligand 3	M23447|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150590|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150634|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150698|Ccl3|20302|chemokine (C-C motif) ligand 3	AK151581|Ccl3|20302|chemokine (C-C motif) ligand 3	AK152648|Ccl3|20302|chemokine (C-C motif) ligand 3	AK155058|Ccl3|20302|chemokine (C-C motif) ligand 3	NM_011337|Ccl3|20302|chemokine (C-C motif) ligand 3
mm9_v1_chr18_-_34811357_34811396	0.0860621	HOX{A6,A7,B6,B7}.p2	BC059013|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK031459|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK038523|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK047789|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK048246|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK079681|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK044478|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK052567|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK075948|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	AK081461|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)	NM_178347|Cdc23|52563|CDC23 (cell division cycle 23, yeast, homolog)
mm9_v1_chr4_-_41670160_41670212	0.0860533	HOX{A6,A7,B6,B7}.p2	AF098508|Dctn3|53598|dynactin 3	AK003255|Dctn3|53598|dynactin 3	BC061120|Dctn3|53598|dynactin 3	AK002720|Dctn3|53598|dynactin 3	AK011840|Dctn3|53598|dynactin 3	AK159344|Dctn3|53598|dynactin 3	NM_001159565|Dctn3|53598|dynactin 3	NM_016890|Dctn3|53598|dynactin 3
mm9_v1_chr18_-_40378992_40378996	0.085919	HOX{A6,A7,B6,B7}.p2	BC055301|Yipf5|67180|Yip1 domain family, member 5
mm9_v1_chr5_-_144984420_144984479	0.0858196	HOX{A6,A7,B6,B7}.p2	AK032858|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK034020|Tecpr1|70381|tectonin beta-propeller repeat containing 1	BC046968|Tecpr1|70381|tectonin beta-propeller repeat containing 1	NM_027410|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK163522|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr15_+_65618577_65618631	0.0856717	HOX{A6,A7,B6,B7}.p2	AK030074|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK039937|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	NM_133766|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK044475|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK052906|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK044000|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	BC032092|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK051060|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK161250|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AB158474|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	BC007482|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK052176|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK129065|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK032461|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr18_+_78012506_78012506	0.0856603	HOX{A6,A7,B6,B7}.p2	NM_007505|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr2_-_180976728_180976769	0.0855985	HOX{A6,A7,B6,B7}.p2	AK157942|BC006779|229003|cDNA sequence BC006779	AK168622|BC006779|229003|cDNA sequence BC006779	NM_183162|BC006779|229003|cDNA sequence BC006779
mm9_v1_chr7_+_116081258_116081309	0.0855801	HOX{A6,A7,B6,B7}.p2	AK217928|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK192917|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr9_-_29219306_29219337	0.0854881	HOX{A6,A7,B6,B7}.p2	AF282980|Ntm|235106|neurotrimin	BC023307|Ntm|235106|neurotrimin
mm9_v1_chr17_+_27693821_27693843	0.0854036	HOX{A6,A7,B6,B7}.p2	J04179|Hmga1|15361|high mobility group AT-hook 1
mm9_v1_chr6_-_39370351_39370385	0.0853616	HOX{A6,A7,B6,B7}.p2	BC003329|Mkrn1|54484|makorin, ring finger protein, 1	AK077060|Mkrn1|54484|makorin, ring finger protein, 1	NM_018810|Mkrn1|54484|makorin, ring finger protein, 1	AF192785|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr10_+_127759640_127759648	0.0853295	HOX{A6,A7,B6,B7}.p2	AK013014|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK019927|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr7_+_28964486_28964515	0.0852695	HOX{A6,A7,B6,B7}.p2	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr3_+_13471681_13471721	0.0851473	HOX{A6,A7,B6,B7}.p2	AK079659|Ralyl|76897|RALY RNA binding protein-like	AK032086|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr19_+_4231936_4231998	0.0851105	HOX{A6,A7,B6,B7}.p2	AK010477|Pold4|69745|polymerase (DNA-directed), delta 4	BC028520|Pold4|69745|polymerase (DNA-directed), delta 4	AF515709|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chr7_-_110976499_110976501	0.0850674	HOX{A6,A7,B6,B7}.p2	S71555|Hbb-b1|15129|hemoglobin, beta adult major chain	S71558|Hbb-b1|15129|hemoglobin, beta adult major chain	S71559|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr2_+_169458802_169458807	0.0849166	HOX{A6,A7,B6,B7}.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr18_-_38157190_38157227	0.0848828	HOX{A6,A7,B6,B7}.p2	AK053122|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	BC068145|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AK220486|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	NM_139206|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chr14_-_31166671_31166671	0.0845794	HOX{A6,A7,B6,B7}.p2	AK147415|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_001083616|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr10_-_60227439_60227519	0.0844261	HOX{A6,A7,B6,B7}.p2	AK084569|Unc5b|107449|unc-5 homolog B (C. elegans)	AK041547|Unc5b|107449|unc-5 homolog B (C. elegans)	AK159205|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr19_-_4943037_4943091	0.0842884	HOX{A6,A7,B6,B7}.p2	AK044418|Peli3|240518|pellino 3	BC028931|Peli3|240518|pellino 3	AK135575|Peli3|240518|pellino 3	NM_172835|Peli3|240518|pellino 3
mm9_v1_chr8_-_49075884_49075954	0.0841959	HOX{A6,A7,B6,B7}.p2	AK147648|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	BC067050|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	NM_133791|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	AB045323|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr17_+_88382830_88382866	0.0840924	HOX{A6,A7,B6,B7}.p2	BC035274|Msh6|17688|mutS homolog 6 (E. coli)
mm9_v1_chr12_+_41172764_41172922	0.083971	HOX{A6,A7,B6,B7}.p2	BC141138|Dock4|238130|dedicator of cytokinesis 4
mm9_v1_chr8_-_28524173_28524415	0.083924	HOX{A6,A7,B6,B7}.p2	AY574265|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AJ245706|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AK149262|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	BC031985|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	NM_021369|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6
mm9_v1_chr5_-_108026906_108026906	0.0838761	HOX{A6,A7,B6,B7}.p2	AK034160|Glmn|170823|glomulin, FKBP associated protein	NM_001161738|Glmn|170823|glomulin, FKBP associated protein
mm9_v1_chr18_+_37514924_37514931	0.0838326	HOX{A6,A7,B6,B7}.p2	AY013790|Pcdhb8|93879|protocadherin beta 8	BC116268|Pcdhb8|93879|protocadherin beta 8	BC127160|Pcdhb8|93879|protocadherin beta 8	NM_053133|Pcdhb8|93879|protocadherin beta 8	BC116269|Pcdhb8|93879|protocadherin beta 8
mm9_v1_chr12_-_110119273_110119347	0.0838206	HOX{A6,A7,B6,B7}.p2	AK179345|Wars|22375|tryptophanyl-tRNA synthetase	AK179848|Wars|22375|tryptophanyl-tRNA synthetase	AK183767|Wars|22375|tryptophanyl-tRNA synthetase	AK185391|Wars|22375|tryptophanyl-tRNA synthetase	AK190023|Wars|22375|tryptophanyl-tRNA synthetase	AK190625|Wars|22375|tryptophanyl-tRNA synthetase	AK192489|Wars|22375|tryptophanyl-tRNA synthetase	AK193136|Wars|22375|tryptophanyl-tRNA synthetase	AK200381|Wars|22375|tryptophanyl-tRNA synthetase	AK201963|Wars|22375|tryptophanyl-tRNA synthetase	AK203296|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr5_+_136108487_136108731	0.0837523	HOX{A6,A7,B6,B7}.p2	AK140006|Rhbdd2|215160|rhomboid domain containing 2	AK141182|Rhbdd2|215160|rhomboid domain containing 2	NM_146002|Rhbdd2|215160|rhomboid domain containing 2	AK165926|Rhbdd2|215160|rhomboid domain containing 2	AK041845|Rhbdd2|215160|rhomboid domain containing 2	AK030434|Rhbdd2|215160|rhomboid domain containing 2	AK043674|Rhbdd2|215160|rhomboid domain containing 2	BC018360|Rhbdd2|215160|rhomboid domain containing 2	BC028957|Rhbdd2|215160|rhomboid domain containing 2	AK189822|Rhbdd2|215160|rhomboid domain containing 2	AK212798|Rhbdd2|215160|rhomboid domain containing 2
mm9_v1_chr1_+_95405907_95405920	0.0837117	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_+_125343129_125343133	0.0834691	HOX{A6,A7,B6,B7}.p2	AK035022|Zfp664|269704|zinc finger protein 664
mm9_v1_chr1_+_181598319_181598619	0.0833853	HOX{A6,A7,B6,B7}.p2	AK086448|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK046033|Sccpdh|109232|saccharopine dehydrogenase (putative)	NM_178653|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK086632|Sccpdh|109232|saccharopine dehydrogenase (putative)	BC025803|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK046468|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK145399|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK081021|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK077695|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK050554|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK166018|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK042919|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK082803|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK182882|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK215316|Sccpdh|109232|saccharopine dehydrogenase (putative)
mm9_v1_chr4_+_48058102_48058256	0.083349	HOX{A6,A7,B6,B7}.p2	BC038520|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	BC068150|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3
mm9_v1_chr13_-_53024983_53025057	0.0831796	HOX{A6,A7,B6,B7}.p2	BC026525|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK134886|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK019978|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003219|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003929|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK169661|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	BC049597|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	NM_016709|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK147855|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase
mm9_v1_chr9_+_53619341_53619344	0.0831206	HOX{A6,A7,B6,B7}.p2	NM_028060|Slc35f2|72022|solute carrier family 35, member F2	BC055843|Slc35f2|72022|solute carrier family 35, member F2
mm9_v1_chr2_-_130250376_130250436	0.0830735	HOX{A6,A7,B6,B7}.p2	NM_001114541|Fam113a|319513|family with sequence similarity 113, member A	BC064802|Fam113a|319513|family with sequence similarity 113, member A	AK031469|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr10_-_94786198_94786320	0.0829217	HOX{A6,A7,B6,B7}.p2	AJ224740|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK131713|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain
mm9_v1_chr8_+_35870347_35870357	0.0828804	HOX{A6,A7,B6,B7}.p2	AK165991|Dusp4|319520|dual specificity phosphatase 4
mm9_v1_chr7_-_133643662_133643692	0.0827512	HOX{A6,A7,B6,B7}.p2	BC043451|Atxn2l|233871|ataxin 2-like
mm9_v1_chr19_+_8986136_8986196	0.0826165	HOX{A6,A7,B6,B7}.p2	AK179326|Ganab|14376|alpha glucosidase 2 alpha neutral subunit
mm9_v1_chr11_-_69418965_69419018	0.0824701	HOX{A6,A7,B6,B7}.p2	X16645|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide
mm9_v1_chrX_+_148450970_148451017	0.0824243	HOX{A6,A7,B6,B7}.p2	AF047600|Smc1a|24061|structural maintenance of chromosomes 1A	NM_019710|Smc1a|24061|structural maintenance of chromosomes 1A	AK013648|Smc1a|24061|structural maintenance of chromosomes 1A	BC131667|Smc1a|24061|structural maintenance of chromosomes 1A
mm9_v1_chr1_-_38954933_38955026	0.0823691	HOX{A6,A7,B6,B7}.p2	BC056956|Chst10|98388|carbohydrate sulfotransferase 10	AK047378|Chst10|98388|carbohydrate sulfotransferase 10	NM_145142|Chst10|98388|carbohydrate sulfotransferase 10	AK050676|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chr17_+_46565890_46565899	0.0823498	HOX{A6,A7,B6,B7}.p2	AF367970|Crip3|114570|cysteine-rich protein 3	AF367971|Crip3|114570|cysteine-rich protein 3	BC116360|Crip3|114570|cysteine-rich protein 3	BC116361|Crip3|114570|cysteine-rich protein 3	NM_053250|Crip3|114570|cysteine-rich protein 3	NM_181664|Crip3|114570|cysteine-rich protein 3	AK080272|Crip3|114570|cysteine-rich protein 3	AY555745|Crip3|114570|cysteine-rich protein 3
mm9_v1_chr11_-_119971500_119971623	0.0822695	HOX{A6,A7,B6,B7}.p2	AK195379|Slc38a10|72055|solute carrier family 38, member 10	AK176940|Slc38a10|72055|solute carrier family 38, member 10	AK182790|Slc38a10|72055|solute carrier family 38, member 10	BC055017|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr6_-_115758729_115758768	0.0822499	HOX{A6,A7,B6,B7}.p2	BC046339|Rpl32|19951|ribosomal protein L32	BC030176|Rpl32|19951|ribosomal protein L32	AK002353|Rpl32|19951|ribosomal protein L32	AK011017|Rpl32|19951|ribosomal protein L32	AK012525|Rpl32|19951|ribosomal protein L32	AK028204|Rpl32|19951|ribosomal protein L32	AK146768|Rpl32|19951|ribosomal protein L32	AK148453|Rpl32|19951|ribosomal protein L32	AK150705|Rpl32|19951|ribosomal protein L32	AK168282|Rpl32|19951|ribosomal protein L32	NM_172086|Rpl32|19951|ribosomal protein L32	BC086909|Rpl32|19951|ribosomal protein L32
mm9_v1_chr2_-_105843408_105843434	0.0821865	HOX{A6,A7,B6,B7}.p2	BC030072|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24	AK011571|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24
mm9_v1_chr17_+_34729396_34729495	0.0821697	HOX{A6,A7,B6,B7}.p2	AF020198|Pbx2|18515|pre B-cell leukemia transcription factor 2	NM_017463|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC087615|Pbx2|18515|pre B-cell leukemia transcription factor 2	AK134357|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr9_-_44096170_44096326	0.0821477	HOX{A6,A7,B6,B7}.p2	AY040865|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AF411084|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AJ426047|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AF425077|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	BC016200|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AK043147|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	NM_138955|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4
mm9_v1_chr9_-_114299732_114299829	0.0821361	HOX{A6,A7,B6,B7}.p2	BC049890|Crtap|56693|cartilage associated protein	AK047506|Crtap|56693|cartilage associated protein	AJ006469|Crtap|56693|cartilage associated protein	AK017797|Crtap|56693|cartilage associated protein	NM_019922|Crtap|56693|cartilage associated protein
mm9_v1_chr17_+_75835208_75835359	0.082116	HOX{A6,A7,B6,B7}.p2	NM_001166493|Rasgrp3|240168|RAS, guanyl releasing protein 3	AK173041|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr18_+_36452279_36452280	0.0819527	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_67171805_67171871	0.0817778	HOX{A6,A7,B6,B7}.p2	AK047891|Cpe|12876|carboxypeptidase E	BC010197|Cpe|12876|carboxypeptidase E	NM_013494|Cpe|12876|carboxypeptidase E	AK160097|Cpe|12876|carboxypeptidase E
mm9_v1_chr2_+_118860522_118860609	0.0817078	HOX{A6,A7,B6,B7}.p2	AK041787|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK044767|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117827|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117828|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	NM_173450|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK043340|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK014804|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035752|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035800|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2
mm9_v1_chr10_+_96945057_96945132	0.0815126	HOX{A6,A7,B6,B7}.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr10_-_80170648_80170694	0.081467	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_20672854_20672888	0.0813631	HOX{A6,A7,B6,B7}.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr11_-_53293696_53293735	0.0812812	HOX{A6,A7,B6,B7}.p2	NM_183173|Ankrd43|237761|ankyrin repeat domain 43
mm9_v1_chr11_-_51807636_51807676	0.0811869	HOX{A6,A7,B6,B7}.p2	AK017280|5430406J06Rik|73848|RIKEN cDNA 5430406J06 gene
mm9_v1_chr18_+_65048630_65048682	0.0808923	HOX{A6,A7,B6,B7}.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr7_+_116077936_116077945	0.080855	HOX{A6,A7,B6,B7}.p2	BC070473|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	BC083190|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr15_-_33617572_33617639	0.0807791	HOX{A6,A7,B6,B7}.p2	AK087510|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	AK173253|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	BC079547|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	NM_001085421|Tspyl5|239364|testis-specific protein, Y-encoded-like 5
mm9_v1_chr6_+_124948627_124948627	0.0806961	HOX{A6,A7,B6,B7}.p2	AK148352|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_001145926|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr11_-_86517662_86517713	0.0806438	HOX{A6,A7,B6,B7}.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr6_+_122463663_122463700	0.0806148	HOX{A6,A7,B6,B7}.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr5_-_39267928_39268050	0.0805493	HOX{A6,A7,B6,B7}.p2	BC125637|Clnk|27278|cytokine-dependent hematopoietic cell linker	BC125639|Clnk|27278|cytokine-dependent hematopoietic cell linker	AF187819|Clnk|27278|cytokine-dependent hematopoietic cell linker	NM_013748|Clnk|27278|cytokine-dependent hematopoietic cell linker	AB021220|Clnk|27278|cytokine-dependent hematopoietic cell linker
mm9_v1_chr7_+_91040481_91040625	0.0804476	HOX{A6,A7,B6,B7}.p2	NM_023403|Mesdc2|67943|mesoderm development candidate 2
mm9_v1_chr13_+_46513668_46513668	0.0804241	HOX{A6,A7,B6,B7}.p2	NM_001081425|Rbm24|666794|RNA binding motif protein 24
mm9_v1_chr4_+_84851029_84851075	0.0803422	HOX{A6,A7,B6,B7}.p2	AK035210|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr1_+_5578546_5578692	0.0801451	HOX{A6,A7,B6,B7}.p2	AK039151|Oprk1|18387|opioid receptor, kappa 1	L11065|Oprk1|18387|opioid receptor, kappa 1	NM_011011|Oprk1|18387|opioid receptor, kappa 1	BC116795|Oprk1|18387|opioid receptor, kappa 1	BC119026|Oprk1|18387|opioid receptor, kappa 1	BC144731|Oprk1|18387|opioid receptor, kappa 1	S81111|Oprk1|18387|opioid receptor, kappa 1
mm9_v1_chr9_+_43901941_43901990	0.0800875	HOX{A6,A7,B6,B7}.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr4_-_151510433_151510433	0.0799725	HOX{A6,A7,B6,B7}.p2	AF540942|Espn|56226|espin	AF540943|Espn|56226|espin	AF540944|Espn|56226|espin	AF540945|Espn|56226|espin	NM_207688|Espn|56226|espin	NM_207689|Espn|56226|espin	NM_207690|Espn|56226|espin	NM_207691|Espn|56226|espin
mm9_v1_chr7_-_91100033_91100106	0.0799097	HOX{A6,A7,B6,B7}.p2	BC056981|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	BC086772|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene
mm9_v1_chr12_-_82695968_82696003	0.0798817	HOX{A6,A7,B6,B7}.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr10_+_61111271_61111326	0.0798404	HOX{A6,A7,B6,B7}.p2	AK145640|Ppa1|67895|pyrophosphatase (inorganic) 1
mm9_v1_chr8_+_94192087_94192089	0.079713	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_59302980_59302980	0.0796826	HOX{A6,A7,B6,B7}.p2	BC128025|Olfr203|258479|olfactory receptor 203	NM_146486|Olfr203|258479|olfactory receptor 203
mm9_v1_chr12_+_121184294_121184434	0.0796815	HOX{A6,A7,B6,B7}.p2	AK132117|Tmem196|217951|transmembrane protein 196	NM_001160385|Tmem196|217951|transmembrane protein 196
mm9_v1_chr8_+_126547293_126547372	0.0795687	HOX{A6,A7,B6,B7}.p2	BC151125|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	NM_001029876|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr10_-_80830149_80830160	0.0795043	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_+_45438212_45438344	0.0793085	HOX{A6,A7,B6,B7}.p2	NM_001037758|Btrc|12234|beta-transducin repeat containing protein	NM_009771|Btrc|12234|beta-transducin repeat containing protein	AK220183|Btrc|12234|beta-transducin repeat containing protein	AK145624|Btrc|12234|beta-transducin repeat containing protein	AK052317|Btrc|12234|beta-transducin repeat containing protein	AK083257|Btrc|12234|beta-transducin repeat containing protein	AF081887|Btrc|12234|beta-transducin repeat containing protein	AK032221|Btrc|12234|beta-transducin repeat containing protein	AK145091|Btrc|12234|beta-transducin repeat containing protein	BC052879|Btrc|12234|beta-transducin repeat containing protein	BC003989|Btrc|12234|beta-transducin repeat containing protein	AF099932|Btrc|12234|beta-transducin repeat containing protein	AF110396|Btrc|12234|beta-transducin repeat containing protein	AF112979|Btrc|12234|beta-transducin repeat containing protein	AK180045|Btrc|12234|beta-transducin repeat containing protein	AK188552|Btrc|12234|beta-transducin repeat containing protein	AK189588|Btrc|12234|beta-transducin repeat containing protein
mm9_v1_chr11_+_95198329_95198359	0.0791505	HOX{A6,A7,B6,B7}.p2	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr11_+_87394647_87394667	0.0789907	HOX{A6,A7,B6,B7}.p2	AB078010|Sept4|18952|septin 4
mm9_v1_chr6_-_119058206_119058206	0.0789658	HOX{A6,A7,B6,B7}.p2	BC138031|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145103|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145104|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145105|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159533|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159534|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159535|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr9_-_14304843_14304925	0.0789006	HOX{A6,A7,B6,B7}.p2	AK155227|Kdm4d|244694|lysine (K)-specific demethylase 4D	AK030020|Kdm4d|244694|lysine (K)-specific demethylase 4D	NM_173433|Kdm4d|244694|lysine (K)-specific demethylase 4D
mm9_v1_chr13_-_55464135_55464143	0.0786121	HOX{A6,A7,B6,B7}.p2	BC055327|Lman2|66890|lectin, mannose-binding 2	NM_025828|Lman2|66890|lectin, mannose-binding 2
mm9_v1_chr1_-_57029287_57029345	0.0785113	HOX{A6,A7,B6,B7}.p2	AK129270|Satb2|212712|special AT-rich sequence binding protein 2
mm9_v1_chr2_+_135885126_135885166	0.078504	HOX{A6,A7,B6,B7}.p2	AK014127|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr12_+_4850202_4850209	0.0781477	HOX{A6,A7,B6,B7}.p2	AK170427|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr1_+_140864297_140864301	0.078121	HOX{A6,A7,B6,B7}.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr14_+_31764562_31764704	0.0781013	HOX{A6,A7,B6,B7}.p2	AK078809|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AJ223071|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	Y09234|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK147381|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK132803|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK149584|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK168094|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	BC057939|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AF099067|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	NM_011849|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK144130|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4
mm9_v1_chr6_+_108765009_108765022	0.0780059	HOX{A6,A7,B6,B7}.p2	AK201340|Arl8b|67166|ADP-ribosylation factor-like 8B	AK206384|Arl8b|67166|ADP-ribosylation factor-like 8B	AK219184|Arl8b|67166|ADP-ribosylation factor-like 8B	AK219830|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr19_-_6982094_6982140	0.0779323	HOX{A6,A7,B6,B7}.p2	BC014682|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr2_+_124435841_124435850	0.0778733	HOX{A6,A7,B6,B7}.p2	AK052232|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr7_-_139761710_139761754	0.0776592	HOX{A6,A7,B6,B7}.p2	AK185243|Oat|18242|ornithine aminotransferase	AK185430|Oat|18242|ornithine aminotransferase
mm9_v1_chr8_-_72433344_72433376	0.0776509	HOX{A6,A7,B6,B7}.p2	AK004386|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr14_+_56443785_56443788	0.0773316	HOX{A6,A7,B6,B7}.p2	AK159078|Nfatc4|73181|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
mm9_v1_chr15_-_66663390_66663390	0.0773179	HOX{A6,A7,B6,B7}.p2	AK036167|Sla|20491|src-like adaptor	NM_001029841|Sla|20491|src-like adaptor
mm9_v1_chr7_-_35048648_35048654	0.0772847	HOX{A6,A7,B6,B7}.p2	AK129125|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr4_-_49857952_49857952	0.0772693	HOX{A6,A7,B6,B7}.p2	NM_001033351|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr10_+_38685309_38685399	0.0772435	HOX{A6,A7,B6,B7}.p2	AK053234|Lama4|16775|laminin, alpha 4	NM_010681|Lama4|16775|laminin, alpha 4	AK031189|Lama4|16775|laminin, alpha 4	AK087015|Lama4|16775|laminin, alpha 4	AK164903|Lama4|16775|laminin, alpha 4	U69176|Lama4|16775|laminin, alpha 4
mm9_v1_chr8_+_24521967_24522003	0.0770103	HOX{A6,A7,B6,B7}.p2	AK088868|Sfrp1|20377|secreted frizzled-related protein 1	NM_013834|Sfrp1|20377|secreted frizzled-related protein 1	BC094662|Sfrp1|20377|secreted frizzled-related protein 1	U88566|Sfrp1|20377|secreted frizzled-related protein 1	BC024495|Sfrp1|20377|secreted frizzled-related protein 1
mm9_v1_chr7_+_148068262_148068416	0.0767598	HOX{A6,A7,B6,B7}.p2	AK075936|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	NM_011875|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK081160|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK163017|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK051078|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK167169|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK171504|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139184|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139187|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK145654|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AF107838|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC029989|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK206994|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm9_v1_chrX_-_154036606_154036649	0.076604	HOX{A6,A7,B6,B7}.p2	AK148325|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	NM_172307|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr12_+_79850007_79850054	0.0765681	HOX{A6,A7,B6,B7}.p2	AF199008|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC138624|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr2_+_119500777_119500991	0.0765093	HOX{A6,A7,B6,B7}.p2	NM_030112|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC048535|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC022717|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC038032|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC117848|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC117849|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK177377|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr11_-_61059170_61059485	0.0764127	HOX{A6,A7,B6,B7}.p2	AK198407|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK192800|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK198241|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2
mm9_v1_chr1_-_174136809_174136866	0.076381	HOX{A6,A7,B6,B7}.p2	BC038282|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK161635|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK077421|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK089070|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK161977|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK153493|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK153141|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr15_+_81977766_81977845	0.0763786	HOX{A6,A7,B6,B7}.p2	AK217643|Srebf2|20788|sterol regulatory element binding factor 2	AF374267|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr7_-_107663293_107663468	0.0762055	HOX{A6,A7,B6,B7}.p2	AK139680|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	BC048501|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	NM_153527|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	AF419292|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13
mm9_v1_chr11_+_96133224_96133235	0.0760695	HOX{A6,A7,B6,B7}.p2	M34857|Hoxb9|15417|homeobox B9
mm9_v1_chr11_-_98054573_98054589	0.0760109	HOX{A6,A7,B6,B7}.p2	BC021440|Med1|19014|mediator complex subunit 1	BC079636|Med1|19014|mediator complex subunit 1	AK147199|Med1|19014|mediator complex subunit 1	AK005207|Med1|19014|mediator complex subunit 1
mm9_v1_chr17_+_36054140_36054142	0.07599	HOX{A6,A7,B6,B7}.p2	BC052059|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	NM_001163818|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AJ504718|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr13_-_21532756_21532926	0.0759094	HOX{A6,A7,B6,B7}.p2	BC089360|Pgbd1|319207|piggyBac transposable element derived 1	BC059882|Pgbd1|319207|piggyBac transposable element derived 1	NM_001012311|Pgbd1|319207|piggyBac transposable element derived 1	NM_001162920|Pgbd1|319207|piggyBac transposable element derived 1	AK076559|Pgbd1|319207|piggyBac transposable element derived 1
mm9_v1_chr18_+_39152852_39152929	0.0758281	HOX{A6,A7,B6,B7}.p2	AK129176|Arhgap26|71302|Rho GTPase activating protein 26	BC141394|Arhgap26|71302|Rho GTPase activating protein 26
mm9_v1_chr11_+_61818881_61818910	0.0757335	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_106630812_106630831	0.0756826	HOX{A6,A7,B6,B7}.p2	U89414|Rps3|27050|ribosomal protein S3
mm9_v1_chr16_-_89818596_89818596	0.0756611	HOX{A6,A7,B6,B7}.p2	AK136856|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145887|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr18_-_33623400_33623430	0.0755398	HOX{A6,A7,B6,B7}.p2	NM_001109989|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr6_-_34267413_34267508	0.0753977	HOX{A6,A7,B6,B7}.p2	BC085310|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	D32250|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	L39795|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	BC004725|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	U29152|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK138000|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK028079|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK139250|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK150197|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK164682|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK145392|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	BC021655|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK153949|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK149861|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	NM_009658|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK170663|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)
mm9_v1_chr6_-_25639835_25639849	0.0753321	HOX{A6,A7,B6,B7}.p2	BC031918|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr10_+_106708886_106708980	0.0752317	HOX{A6,A7,B6,B7}.p2	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr2_+_71291369_71291427	0.0750642	HOX{A6,A7,B6,B7}.p2	AK010067|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	NM_025633|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	AK005241|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	BC060739|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)
mm9_v1_chr6_+_145756902_145756931	0.0749611	HOX{A6,A7,B6,B7}.p2	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr8_-_25934840_25934840	0.07494	HOX{A6,A7,B6,B7}.p2	AK161262|Adam5|11499|a disintegrin and metallopeptidase domain 5	NM_007401|Adam5|11499|a disintegrin and metallopeptidase domain 5
mm9_v1_chr18_-_40379041_40379060	0.0748733	HOX{A6,A7,B6,B7}.p2	NM_023311|Yipf5|67180|Yip1 domain family, member 5
mm9_v1_chr4_-_115726466_115726490	0.0745302	HOX{A6,A7,B6,B7}.p2	AK012994|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4	NM_028142|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr14_+_48268985_48269068	0.0745136	HOX{A6,A7,B6,B7}.p2	AK040200|Ktn1|16709|kinectin 1	BC066871|Ktn1|16709|kinectin 1	BC075697|Ktn1|16709|kinectin 1
mm9_v1_chr1_-_74982118_74982188	0.0744726	HOX{A6,A7,B6,B7}.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr15_-_55388811_55388908	0.0744565	HOX{A6,A7,B6,B7}.p2	BC055470|Mrpl13|68537|mitochondrial ribosomal protein L13	AB049641|Mrpl13|68537|mitochondrial ribosomal protein L13	BC027542|Mrpl13|68537|mitochondrial ribosomal protein L13	AK160744|Mrpl13|68537|mitochondrial ribosomal protein L13	AK003283|Mrpl13|68537|mitochondrial ribosomal protein L13	NM_026759|Mrpl13|68537|mitochondrial ribosomal protein L13	BC048498|Mrpl13|68537|mitochondrial ribosomal protein L13	BC060968|Mrpl13|68537|mitochondrial ribosomal protein L13
mm9_v1_chr11_-_55233366_55233456	0.0743599	HOX{A6,A7,B6,B7}.p2	AK049692|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK082283|Sparc|20692|secreted acidic cysteine rich glycoprotein	X04017|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK148670|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK161229|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK089114|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK159249|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr17_+_29227908_29227961	0.0742733	HOX{A6,A7,B6,B7}.p2	NM_001111099|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr16_+_13265171_13265171	0.0739549	HOX{A6,A7,B6,B7}.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr3_-_89049698_89049746	0.0738762	HOX{A6,A7,B6,B7}.p2	AY251388|Trim46|360213|tripartite motif-containing 46
mm9_v1_chr6_+_148303173_148303234	0.073749	HOX{A6,A7,B6,B7}.p2	AK004068|Rps4y2|66184|ribosomal protein S4, Y-linked 2	AK012382|Rps4y2|66184|ribosomal protein S4, Y-linked 2	AK132160|Rps4y2|66184|ribosomal protein S4, Y-linked 2	BC047994|Rps4y2|66184|ribosomal protein S4, Y-linked 2
mm9_v1_chr2_+_74513069_74513131	0.0736723	HOX{A6,A7,B6,B7}.p2	BC145656|Hoxd12|15432|homeobox D12	NM_008274|Hoxd12|15432|homeobox D12	AK031206|Hoxd12|15432|homeobox D12
mm9_v1_chr15_+_91503654_91503682	0.0736105	HOX{A6,A7,B6,B7}.p2	AK052591|Lrrk2|66725|leucine-rich repeat kinase 2	NM_025730|Lrrk2|66725|leucine-rich repeat kinase 2
mm9_v1_chrX_+_58962671_58962790	0.0735836	HOX{A6,A7,B6,B7}.p2	AK137057|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	BC052689|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	NM_001018087|Ldoc1|434784|leucine zipper, down-regulated in cancer 1
mm9_v1_chr15_-_98558560_98558628	0.0735436	HOX{A6,A7,B6,B7}.p2	BC021345|Fkbp11|66120|FK506 binding protein 11	BC037596|Fkbp11|66120|FK506 binding protein 11	AK019132|Fkbp11|66120|FK506 binding protein 11	BC002311|Fkbp11|66120|FK506 binding protein 11	BC022900|Fkbp11|66120|FK506 binding protein 11	AK007813|Fkbp11|66120|FK506 binding protein 11	AK003331|Fkbp11|66120|FK506 binding protein 11	NM_024169|Fkbp11|66120|FK506 binding protein 11
mm9_v1_chr13_+_55698200_55698219	0.0734868	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_129135707_129135713	0.073256	HOX{A6,A7,B6,B7}.p2	AK156449|Il1a|16175|interleukin 1 alpha	NM_010554|Il1a|16175|interleukin 1 alpha	X01450|Il1a|16175|interleukin 1 alpha
mm9_v1_chr2_-_155833636_155833712	0.0731812	HOX{A6,A7,B6,B7}.p2	AK163252|6430550D23Rik|320095|RIKEN cDNA 6430550D23 gene	AK032457|6430550D23Rik|320095|RIKEN cDNA 6430550D23 gene	AK047226|6430550D23Rik|320095|RIKEN cDNA 6430550D23 gene	NM_001145352|6430550D23Rik|320095|RIKEN cDNA 6430550D23 gene
mm9_v1_chr6_-_25639767_25639791	0.0729842	HOX{A6,A7,B6,B7}.p2	AK044508|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr14_+_21113911_21113999	0.0729118	HOX{A6,A7,B6,B7}.p2	NM_026341|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	AK161922|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	AK017031|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC049948|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC056982|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC040807|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC021366|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC038023|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC037091|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13
mm9_v1_chr17_-_32524703_32524761	0.0728607	HOX{A6,A7,B6,B7}.p2	AB255388|Wiz|22404|widely-interspaced zinc finger motifs	NM_212438|Wiz|22404|widely-interspaced zinc finger motifs
mm9_v1_chr2_-_160934743_160934810	0.0728235	HOX{A6,A7,B6,B7}.p2	BC145629|Chd6|71389|chromodomain helicase DNA binding protein 6	BC150806|Chd6|71389|chromodomain helicase DNA binding protein 6	AK018129|Chd6|71389|chromodomain helicase DNA binding protein 6	AK040495|Chd6|71389|chromodomain helicase DNA binding protein 6	AK142177|Chd6|71389|chromodomain helicase DNA binding protein 6	AK086807|Chd6|71389|chromodomain helicase DNA binding protein 6	AK162083|Chd6|71389|chromodomain helicase DNA binding protein 6	NM_173368|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080892|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080927|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr4_+_129138924_129138934	0.0728005	HOX{A6,A7,B6,B7}.p2	AK037201|Bsdc1|100383|BSD domain containing 1	AK084857|Bsdc1|100383|BSD domain containing 1	AK144053|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr8_-_123606930_123607025	0.0725271	HOX{A6,A7,B6,B7}.p2	AK087264|1110050K14Rik|68790|RIKEN cDNA 1110050K14 gene
mm9_v1_chr7_+_128195668_128195858	0.0722306	HOX{A6,A7,B6,B7}.p2	AK188768|Mettl9|59052|methyltransferase like 9	AK202674|Mettl9|59052|methyltransferase like 9	AK208061|Mettl9|59052|methyltransferase like 9	AK209406|Mettl9|59052|methyltransferase like 9	AK210173|Mettl9|59052|methyltransferase like 9	AK217664|Mettl9|59052|methyltransferase like 9	AK219043|Mettl9|59052|methyltransferase like 9	AK206681|Mettl9|59052|methyltransferase like 9	AK216652|Mettl9|59052|methyltransferase like 9
mm9_v1_chr3_+_84668066_84668066	0.0720854	HOX{A6,A7,B6,B7}.p2	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr7_+_121184667_121184743	0.072067	HOX{A6,A7,B6,B7}.p2	AK084717|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr5_-_108026593_108026666	0.0719338	HOX{A6,A7,B6,B7}.p2	BC003446|Glmn|170823|glomulin, FKBP associated protein	AK172659|Glmn|170823|glomulin, FKBP associated protein	AK165661|Glmn|170823|glomulin, FKBP associated protein	AK169045|Glmn|170823|glomulin, FKBP associated protein	NM_001161739|Glmn|170823|glomulin, FKBP associated protein	NM_133248|Glmn|170823|glomulin, FKBP associated protein
mm9_v1_chr6_+_42214999_42215177	0.0719104	HOX{A6,A7,B6,B7}.p2	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chr12_+_21307381_21307403	0.0718252	HOX{A6,A7,B6,B7}.p2	AK213227|Cpsf3|54451|cleavage and polyadenylation specificity factor 3
mm9_v1_chr4_-_62180914_62181170	0.071809	HOX{A6,A7,B6,B7}.p2	BC018236|Alad|17025|aminolevulinate, delta-, dehydratase	AK167673|Alad|17025|aminolevulinate, delta-, dehydratase	AK002300|Alad|17025|aminolevulinate, delta-, dehydratase	AK032908|Alad|17025|aminolevulinate, delta-, dehydratase	AK168119|Alad|17025|aminolevulinate, delta-, dehydratase	AK168132|Alad|17025|aminolevulinate, delta-, dehydratase	BC055930|Alad|17025|aminolevulinate, delta-, dehydratase	NM_008525|Alad|17025|aminolevulinate, delta-, dehydratase
mm9_v1_chr3_+_88425294_88425344	0.0717135	HOX{A6,A7,B6,B7}.p2	NM_001198912|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	NM_001198913|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr9_+_21731914_21732108	0.0716182	HOX{A6,A7,B6,B7}.p2	AK011114|Ccdc159|67119|coiled-coil domain containing 159	NM_001164614|Ccdc159|67119|coiled-coil domain containing 159	NM_025977|Ccdc159|67119|coiled-coil domain containing 159	BC120702|Ccdc159|67119|coiled-coil domain containing 159	BC120704|Ccdc159|67119|coiled-coil domain containing 159	BC145014|Ccdc159|67119|coiled-coil domain containing 159	AK148448|Ccdc159|67119|coiled-coil domain containing 159	AK042884|Ccdc159|67119|coiled-coil domain containing 159	AK016073|Ccdc159|67119|coiled-coil domain containing 159
mm9_v1_chr3_-_59014800_59014805	0.0715706	HOX{A6,A7,B6,B7}.p2	BC119043|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK008013|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK038560|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK083264|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	NM_028808|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13
mm9_v1_chr9_-_107673318_107673340	0.0714488	HOX{A6,A7,B6,B7}.p2	AK134183|Rbm5|83486|RNA binding motif protein 5	AK146880|Rbm5|83486|RNA binding motif protein 5	NM_148930|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr18_+_78021267_78021344	0.0714154	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_109714134_109714134	0.0713965	HOX{A6,A7,B6,B7}.p2	AK038956|Zfp711|245595|zinc finger protein 711	NM_177747|Zfp711|245595|zinc finger protein 711
mm9_v1_chr3_+_122432075_122432112	0.0713484	HOX{A6,A7,B6,B7}.p2	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr10_-_102698899_102698955	0.0713366	HOX{A6,A7,B6,B7}.p2	AK158531|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	BC051400|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	AK015687|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	NM_001163559|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	NM_029134|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1
mm9_v1_chr18_-_15471207_15471211	0.0712199	HOX{A6,A7,B6,B7}.p2	AK088053|E430002N23Rik|319440|RIKEN cDNA E430002N23 gene
mm9_v1_chr7_-_86887995_86888016	0.0711723	HOX{A6,A7,B6,B7}.p2	AK076776|Pex11a|18631|peroxisomal biogenesis factor 11 alpha
mm9_v1_chr11_-_51419012_51419040	0.0711073	HOX{A6,A7,B6,B7}.p2	AK207379|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr11_+_101017197_101017233	0.0710539	HOX{A6,A7,B6,B7}.p2	NM_134028|Tubg2|103768|tubulin, gamma 2	BC019652|Tubg2|103768|tubulin, gamma 2	BC078446|Tubg2|103768|tubulin, gamma 2
mm9_v1_chr1_+_43155550_43155613	0.0710145	HOX{A6,A7,B6,B7}.p2	BC006931|AI597479|98404|expressed sequence AI597479	NM_133818|AI597479|98404|expressed sequence AI597479	AK081372|AI597479|98404|expressed sequence AI597479
mm9_v1_chr14_-_73725576_73725603	0.0709799	HOX{A6,A7,B6,B7}.p2	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr11_-_55233339_55233353	0.0708784	HOX{A6,A7,B6,B7}.p2	AK003162|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK133377|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK139473|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK146935|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr2_+_14978339_14978456	0.0699728	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_-_11679242_11679284	0.0697375	HOX{A6,A7,B6,B7}.p2	BC029738|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AF237911|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AY039037|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AK156878|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AK152859|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AK004295|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D
mm9_v1_chr10_-_23506981_23507073	0.0694725	HOX{A6,A7,B6,B7}.p2	BC090257|Rps12|20042|ribosomal protein S12	BC089339|Rps12|20042|ribosomal protein S12	BC092044|Rps12|20042|ribosomal protein S12	BC002079|Rps12|20042|ribosomal protein S12	BC099377|Rps12|20042|ribosomal protein S12	BC089338|Rps12|20042|ribosomal protein S12	AK132208|Rps12|20042|ribosomal protein S12	AK166923|Rps12|20042|ribosomal protein S12	AK166992|Rps12|20042|ribosomal protein S12	BC096653|Rps12|20042|ribosomal protein S12	AK002848|Rps12|20042|ribosomal protein S12	AK008057|Rps12|20042|ribosomal protein S12	AK032757|Rps12|20042|ribosomal protein S12	AK168324|Rps12|20042|ribosomal protein S12	AK169215|Rps12|20042|ribosomal protein S12	NM_011295|Rps12|20042|ribosomal protein S12
mm9_v1_chr19_-_44628193_44628261	0.0694112	HOX{A6,A7,B6,B7}.p2	AK212374|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
mm9_v1_chr6_+_73221007_73221091	0.0692545	HOX{A6,A7,B6,B7}.p2	AK204482|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr4_+_108952859_108952895	0.0692358	HOX{A6,A7,B6,B7}.p2	NM_007943|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr8_-_73905282_73905372	0.0692135	HOX{A6,A7,B6,B7}.p2	L25674|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6	AK171552|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6	X76654|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6
mm9_v1_chr4_-_147310804_147310884	0.0691364	HOX{A6,A7,B6,B7}.p2	BC006599|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AF046782|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK131632|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK137480|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK157729|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK160822|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	NM_011122|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm9_v1_chr14_+_58417025_58417046	0.0689711	HOX{A6,A7,B6,B7}.p2	NM_009119|Sap18|20220|Sin3-associated polypeptide 18
mm9_v1_chr3_-_89856250_89856452	0.068942	HOX{A6,A7,B6,B7}.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr13_-_76081142_76081219	0.0689411	HOX{A6,A7,B6,B7}.p2	AK139158|Rhobtb3|73296|Rho-related BTB domain containing 3	AK020938|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr19_-_45857542_45857780	0.0688779	HOX{A6,A7,B6,B7}.p2	AF132214|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC020093|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC054821|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	NM_023799|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr12_-_84938095_84938119	0.0687968	HOX{A6,A7,B6,B7}.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr2_-_25947338_25947397	0.068781	HOX{A6,A7,B6,B7}.p2	AK043047|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm9_v1_chr7_-_4465970_4466046	0.0685401	HOX{A6,A7,B6,B7}.p2	AJ131711|Tnnt1|21955|troponin T1, skeletal, slow
mm9_v1_chr9_-_62384766_62384790	0.0684939	HOX{A6,A7,B6,B7}.p2	AK047330|Coro2b|235431|coronin, actin binding protein, 2B	AK047527|Coro2b|235431|coronin, actin binding protein, 2B
mm9_v1_chr10_-_80170504_80170531	0.0684304	HOX{A6,A7,B6,B7}.p2	AK205331|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr17_+_37095536_37095635	0.0683496	HOX{A6,A7,B6,B7}.p2	BC027007|Znrd1as|76416|ZNRD1 antisense RNA	NM_029602|Znrd1as|76416|ZNRD1 antisense RNA	AK006236|Znrd1as|76416|ZNRD1 antisense RNA	AK161503|Znrd1as|76416|ZNRD1 antisense RNA
mm9_v1_chr7_-_81429262_81429274	0.0681572	HOX{A6,A7,B6,B7}.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr12_+_72932132_72932152	0.0681364	HOX{A6,A7,B6,B7}.p2	BC047431|Daam1|208846|dishevelled associated activator of morphogenesis 1	AK053785|Daam1|208846|dishevelled associated activator of morphogenesis 1	AY426535|Daam1|208846|dishevelled associated activator of morphogenesis 1
mm9_v1_chr19_-_5424856_5425071	0.0679128	HOX{A6,A7,B6,B7}.p2	BC002090|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	NM_024176|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	AK010152|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm9_v1_chr8_-_27109536_27109553	0.0678748	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_21947587_21947627	0.0677316	HOX{A6,A7,B6,B7}.p2	AK013518|Tmem41a|66664|transmembrane protein 41a	BC011512|Tmem41a|66664|transmembrane protein 41a	AK007685|Tmem41a|66664|transmembrane protein 41a	NM_025693|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr11_+_115761444_115761621	0.0677209	HOX{A6,A7,B6,B7}.p2	NM_183259|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	AK020450|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	AK004370|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	BC065414|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene
mm9_v1_chr14_-_46277816_46277821	0.0676775	HOX{A6,A7,B6,B7}.p2	DQ272481|Ddhd1|114874|DDHD domain containing 1	DQ272482|Ddhd1|114874|DDHD domain containing 1	NM_001039106|Ddhd1|114874|DDHD domain containing 1	NM_001042719|Ddhd1|114874|DDHD domain containing 1	NM_176845|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr17_-_57199014_57199114	0.0676372	HOX{A6,A7,B6,B7}.p2	AK206310|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AK158821|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr10_+_7383108_7383253	0.0675546	HOX{A6,A7,B6,B7}.p2	AK083146|A630066F11Rik|320642|RIKEN cDNA A630066F11 gene	AK039358|A630066F11Rik|320642|RIKEN cDNA A630066F11 gene	AK042171|A630066F11Rik|320642|RIKEN cDNA A630066F11 gene	BC018310|A630066F11Rik|320642|RIKEN cDNA A630066F11 gene
mm9_v1_chr2_+_71892681_71892690	0.0675157	HOX{A6,A7,B6,B7}.p2	AB445011|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr2_-_26761162_26761187	0.0675123	HOX{A6,A7,B6,B7}.p2	AK207179|Med22|20933|mediator complex subunit 22	AK191222|Med22|20933|mediator complex subunit 22
mm9_v1_chr4_-_131885399_131885463	0.0674785	HOX{A6,A7,B6,B7}.p2	AK152986|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	BC048840|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	BC005795|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	BC055454|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	AK003534|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	NM_027925|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1
mm9_v1_chr17_+_35118792_35118874	0.0673904	HOX{A6,A7,B6,B7}.p2	NM_001110101|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK162880|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC014288|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK151605|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr12_-_91976586_91976877	0.0671555	HOX{A6,A7,B6,B7}.p2	AK032038|Dio2|13371|deiodinase, iodothyronine, type II	AK045607|Dio2|13371|deiodinase, iodothyronine, type II	AF177196|Dio2|13371|deiodinase, iodothyronine, type II	AF177197|Dio2|13371|deiodinase, iodothyronine, type II	AF093137|Dio2|13371|deiodinase, iodothyronine, type II	BC125383|Dio2|13371|deiodinase, iodothyronine, type II	BC125385|Dio2|13371|deiodinase, iodothyronine, type II	AF096875|Dio2|13371|deiodinase, iodothyronine, type II	NM_010050|Dio2|13371|deiodinase, iodothyronine, type II
mm9_v1_chr18_-_70689791_70689865	0.0670177	HOX{A6,A7,B6,B7}.p2	BC082278|Poli|26447|polymerase (DNA directed), iota	NM_001136090|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr14_+_99697878_99697880	0.0670037	HOX{A6,A7,B6,B7}.p2	AK142985|Klf5|12224|Kruppel-like factor 5
mm9_v1_chr5_+_96803224_96803224	0.0668752	HOX{A6,A7,B6,B7}.p2	AK043422|Fras1|231470|Fraser syndrome 1 homolog (human)
mm9_v1_chr10_-_59465725_59465794	0.0668565	HOX{A6,A7,B6,B7}.p2	AK012280|Anapc16|52717|anaphase promoting complex subunit 16
mm9_v1_chr11_-_48630854_48630892	0.0668104	HOX{A6,A7,B6,B7}.p2	BC041780|Trim41|211007|tripartite motif-containing 41	BC031905|Trim41|211007|tripartite motif-containing 41	NM_145377|Trim41|211007|tripartite motif-containing 41
mm9_v1_chr9_+_3404047_3404117	0.066454	HOX{A6,A7,B6,B7}.p2	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr4_+_43071852_43071944	0.0661563	HOX{A6,A7,B6,B7}.p2	AK161056|Unc13b|22249|unc-13 homolog B (C. elegans)	NM_001081413|Unc13b|22249|unc-13 homolog B (C. elegans)	BC157967|Unc13b|22249|unc-13 homolog B (C. elegans)	BC158025|Unc13b|22249|unc-13 homolog B (C. elegans)	NM_021468|Unc13b|22249|unc-13 homolog B (C. elegans)
mm9_v1_chr10_-_88193845_88193845	0.0660835	HOX{A6,A7,B6,B7}.p2	NM_001037166|Gm4925|237433|predicted gene 4925
mm9_v1_chr6_-_122806042_122806103	0.0659447	HOX{A6,A7,B6,B7}.p2	BC003728|C3ar1|12267|complement component 3a receptor 1	AK154134|C3ar1|12267|complement component 3a receptor 1	AK154609|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chrX_-_98417753_98417901	0.0658447	HOX{A6,A7,B6,B7}.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr15_+_55083779_55083879	0.0658057	HOX{A6,A7,B6,B7}.p2	AK170208|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr5_-_114541313_114541402	0.0656893	HOX{A6,A7,B6,B7}.p2	BC059878|Svop|68666|SV2 related protein	AK047655|Svop|68666|SV2 related protein	AK053833|Svop|68666|SV2 related protein	AK160770|Svop|68666|SV2 related protein	AK047764|Svop|68666|SV2 related protein	AK082744|Svop|68666|SV2 related protein	NM_026805|Svop|68666|SV2 related protein
mm9_v1_chr12_+_70473519_70473535	0.0656714	HOX{A6,A7,B6,B7}.p2	AK006366|Arf6|11845|ADP-ribosylation factor 6
mm9_v1_chr9_+_109954534_109954609	0.0656143	HOX{A6,A7,B6,B7}.p2	AK138416|Mtap4|17758|microtubule-associated protein 4	AK146790|Mtap4|17758|microtubule-associated protein 4	BC042645|Mtap4|17758|microtubule-associated protein 4	AK134996|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chrX_-_16896428_16896493	0.0655916	HOX{A6,A7,B6,B7}.p2	BC120659|Efhc2|74405|EF-hand domain (C-terminal) containing 2	BC125625|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK016714|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK029501|Efhc2|74405|EF-hand domain (C-terminal) containing 2	NM_028916|Efhc2|74405|EF-hand domain (C-terminal) containing 2
mm9_v1_chr7_+_133920438_133920526	0.0655263	HOX{A6,A7,B6,B7}.p2	AK003371|Ypel3|66090|yippee-like 3 (Drosophila)	NM_025347|Ypel3|66090|yippee-like 3 (Drosophila)	NM_026875|Ypel3|66090|yippee-like 3 (Drosophila)	AF523353|Ypel3|66090|yippee-like 3 (Drosophila)	AK002925|Ypel3|66090|yippee-like 3 (Drosophila)	BC009171|Ypel3|66090|yippee-like 3 (Drosophila)
mm9_v1_chr10_-_99949933_99949987	0.0653428	HOX{A6,A7,B6,B7}.p2	AK044857|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK149759|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK158192|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK165838|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	NM_001033332|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	NM_001110013|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3
mm9_v1_chr9_+_26838233_26838356	0.065141	HOX{A6,A7,B6,B7}.p2	DQ340802|Ncapd3|78658|non-SMC condensin II complex, subunit D3	AK019297|Ncapd3|78658|non-SMC condensin II complex, subunit D3	AK139081|Ncapd3|78658|non-SMC condensin II complex, subunit D3	AK129046|Ncapd3|78658|non-SMC condensin II complex, subunit D3
mm9_v1_chr12_+_109926485_109926622	0.0650786	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_134942585_134942602	0.0650024	HOX{A6,A7,B6,B7}.p2	AK165803|Pik3c2b|240752|phosphoinositide-3-kinase, class 2, beta polypeptide	NM_001099276|Pik3c2b|240752|phosphoinositide-3-kinase, class 2, beta polypeptide
mm9_v1_chr8_-_46467524_46467644	0.0649483	HOX{A6,A7,B6,B7}.p2	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr7_-_127038916_127038971	0.0649375	HOX{A6,A7,B6,B7}.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr2_+_125083140_125083255	0.0648639	HOX{A6,A7,B6,B7}.p2	AK166116|Dut|110074|deoxyuridine triphosphatase
mm9_v1_chr17_+_28829512_28829512	0.0646733	HOX{A6,A7,B6,B7}.p2	AK151348|Mapk14|26416|mitogen-activated protein kinase 14	AK153025|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168513|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr4_-_3761538_3761694	0.0644941	HOX{A6,A7,B6,B7}.p2	AK150667|Rps20|67427|ribosomal protein S20
mm9_v1_chr7_-_97624492_97624501	0.0644141	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_63185457_63185630	0.0642461	HOX{A6,A7,B6,B7}.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr7_-_85722668_85722860	0.0642189	HOX{A6,A7,B6,B7}.p2	AY336094|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_008746|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_182809|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	BC139764|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035399|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035400|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3
mm9_v1_chr16_-_57606866_57606989	0.0641066	HOX{A6,A7,B6,B7}.p2	BC038891|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	BC038682|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019808|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK080386|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK003195|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019979|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK012168|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK136657|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	NM_025599|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene
mm9_v1_chr12_-_77923303_77923517	0.0640562	HOX{A6,A7,B6,B7}.p2	AB232610|Rab15|104886|RAB15, member RAS oncogene family	AK158637|Rab15|104886|RAB15, member RAS oncogene family	BC013790|Rab15|104886|RAB15, member RAS oncogene family	AK158768|Rab15|104886|RAB15, member RAS oncogene family	BC027769|Rab15|104886|RAB15, member RAS oncogene family	NM_134050|Rab15|104886|RAB15, member RAS oncogene family
mm9_v1_chr2_+_29202327_29202356	0.0637486	HOX{A6,A7,B6,B7}.p2	AK147181|Med27|68975|mediator complex subunit 27	BC016537|Med27|68975|mediator complex subunit 27	AK009764|Med27|68975|mediator complex subunit 27	AK005251|Med27|68975|mediator complex subunit 27	NM_026896|Med27|68975|mediator complex subunit 27
mm9_v1_chr2_+_164323024_164323043	0.063722	HOX{A6,A7,B6,B7}.p2	NM_133779|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK049171|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK049990|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK019717|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK090020|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK155057|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK153462|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK153464|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK044499|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK157226|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr12_-_70473320_70473513	0.0636437	HOX{A6,A7,B6,B7}.p2	AK017126|Gm9887|100036526|predicted gene 9887	AK015077|Gm9887|100036526|predicted gene 9887	AK016848|Gm9887|100036526|predicted gene 9887
mm9_v1_chr6_+_142712854_142712889	0.0636249	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_69609411_69609422	0.0635817	HOX{A6,A7,B6,B7}.p2	AK087554|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr10_-_122513447_122513560	0.0634863	HOX{A6,A7,B6,B7}.p2	AK122425|Mon2|67074|MON2 homolog (yeast)	NM_001163024|Mon2|67074|MON2 homolog (yeast)	NM_001163025|Mon2|67074|MON2 homolog (yeast)	NM_153395|Mon2|67074|MON2 homolog (yeast)
mm9_v1_chr13_-_41174986_41175074	0.0634675	HOX{A6,A7,B6,B7}.p2	BC050009|Mak|17152|male germ cell-associated kinase	NM_001145802|Mak|17152|male germ cell-associated kinase	NM_001145803|Mak|17152|male germ cell-associated kinase
mm9_v1_chr2_+_35137898_35137961	0.0634458	HOX{A6,A7,B6,B7}.p2	AK143664|Gsn|227753|gelsolin	AK168829|Gsn|227753|gelsolin	AK076156|Gsn|227753|gelsolin	NM_146120|Gsn|227753|gelsolin	BC023143|Gsn|227753|gelsolin
mm9_v1_chr15_+_9365782_9365824	0.0633501	HOX{A6,A7,B6,B7}.p2	AK006467|Capsl|75568|calcyphosine-like	NM_029341|Capsl|75568|calcyphosine-like	BC061015|Capsl|75568|calcyphosine-like
mm9_v1_chr2_+_148515898_148515954	0.063018	HOX{A6,A7,B6,B7}.p2	AK208985|Gzf1|74533|GDNF-inducible zinc finger protein 1
mm9_v1_chr2_-_130985746_130985825	0.0629709	HOX{A6,A7,B6,B7}.p2	AK003406|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	NM_026091|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	BC071212|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	AK006622|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene
mm9_v1_chr5_-_122020680_122020739	0.0626281	HOX{A6,A7,B6,B7}.p2	AK184586|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK189526|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK188389|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr18_+_37979199_37979219	0.0626248	HOX{A6,A7,B6,B7}.p2	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr19_+_22213516_22213606	0.0625739	HOX{A6,A7,B6,B7}.p2	AK173218|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544532|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544533|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544534|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544535|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544536|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035239|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035240|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035241|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035242|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035243|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr18_+_20832323_20832362	0.0625729	HOX{A6,A7,B6,B7}.p2	AK080757|Ttr|22139|transthyretin
mm9_v1_chr9_-_89594389_89594428	0.0624808	HOX{A6,A7,B6,B7}.p2	AK208137|Tmed3|66111|transmembrane emp24 domain containing 3	AK211505|Tmed3|66111|transmembrane emp24 domain containing 3	AK212102|Tmed3|66111|transmembrane emp24 domain containing 3	AK217166|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr5_-_33196860_33196908	0.0624363	HOX{A6,A7,B6,B7}.p2	AK134346|C330019G07Rik|215476|RIKEN cDNA C330019G07 gene	NM_194340|C330019G07Rik|215476|RIKEN cDNA C330019G07 gene
mm9_v1_chr3_+_95087190_95087293	0.062419	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_62190182_62190262	0.0620742	HOX{A6,A7,B6,B7}.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr14_+_33135204_33135204	0.062001	HOX{A6,A7,B6,B7}.p2	NM_001081130|Ogdhl|239017|oxoglutarate dehydrogenase-like
mm9_v1_chr12_-_101121613_101121712	0.0619475	HOX{A6,A7,B6,B7}.p2	BC049109|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK035051|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011836|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011507|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	NM_030172|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK132473|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene
mm9_v1_chr6_-_106750030_106750092	0.0618987	HOX{A6,A7,B6,B7}.p2	AF229032|Crbn|58799|cereblon	BC069905|Crbn|58799|cereblon	BC033458|Crbn|58799|cereblon	BC086488|Crbn|58799|cereblon	AK032836|Crbn|58799|cereblon	AK075959|Crbn|58799|cereblon	AK141428|Crbn|58799|cereblon	AK076144|Crbn|58799|cereblon	AK077707|Crbn|58799|cereblon	AK160219|Crbn|58799|cereblon	AK050557|Crbn|58799|cereblon	NM_021449|Crbn|58799|cereblon	NM_175357|Crbn|58799|cereblon
mm9_v1_chr7_+_19813823_19813887	0.0618522	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_31019412_31019424	0.0618213	HOX{A6,A7,B6,B7}.p2	AK164012|Aplp2|11804|amyloid beta (A4) precursor-like protein 2
mm9_v1_chr14_-_55136145_55136306	0.061788	HOX{A6,A7,B6,B7}.p2	AK186126|Prmt5|27374|protein arginine N-methyltransferase 5	AF167573|Prmt5|27374|protein arginine N-methyltransferase 5	AK076346|Prmt5|27374|protein arginine N-methyltransferase 5	AK132414|Prmt5|27374|protein arginine N-methyltransferase 5	AK165165|Prmt5|27374|protein arginine N-methyltransferase 5	BC023905|Prmt5|27374|protein arginine N-methyltransferase 5	AK084106|Prmt5|27374|protein arginine N-methyltransferase 5	NM_013768|Prmt5|27374|protein arginine N-methyltransferase 5
mm9_v1_chr7_-_52124950_52125085	0.0617008	HOX{A6,A7,B6,B7}.p2	BC008543|Ptov1|84113|prostate tumor over expressed gene 1
mm9_v1_chr19_+_6085096_6085130	0.0616755	HOX{A6,A7,B6,B7}.p2	NM_026410|Cdca5|67849|cell division cycle associated 5	AK011701|Cdca5|67849|cell division cycle associated 5	BC052904|Cdca5|67849|cell division cycle associated 5	AK010540|Cdca5|67849|cell division cycle associated 5
mm9_v1_chr2_-_180976663_180976720	0.0616293	HOX{A6,A7,B6,B7}.p2	AK172227|BC006779|229003|cDNA sequence BC006779
mm9_v1_chrX_+_35953741_35953908	0.0613683	HOX{A6,A7,B6,B7}.p2	AK087975|Mcts1|68995|malignant T cell amplified sequence 1	AK005292|Mcts1|68995|malignant T cell amplified sequence 1	NM_026902|Mcts1|68995|malignant T cell amplified sequence 1	BC010486|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr1_-_158869401_158869517	0.06122	HOX{A6,A7,B6,B7}.p2	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr8_-_97125577_97125635	0.0611093	HOX{A6,A7,B6,B7}.p2	AK151603|Fam192a|102122|family with sequence similarity 192, member A	BC025472|Fam192a|102122|family with sequence similarity 192, member A	BC040818|Fam192a|102122|family with sequence similarity 192, member A	BC027060|Fam192a|102122|family with sequence similarity 192, member A	AK010053|Fam192a|102122|family with sequence similarity 192, member A	NM_028221|Fam192a|102122|family with sequence similarity 192, member A
mm9_v1_chr19_-_6982516_6982562	0.06101	HOX{A6,A7,B6,B7}.p2	AK209224|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr16_-_38445988_38446143	0.0608554	HOX{A6,A7,B6,B7}.p2	AK003751|Adprh|11544|ADP-ribosylarginine hydrolase
mm9_v1_chr11_+_83105217_83105243	0.0607487	HOX{A6,A7,B6,B7}.p2	AK166453|AA465934|613254|expressed sequence AA465934
mm9_v1_chr11_-_106077568_106077625	0.0607432	HOX{A6,A7,B6,B7}.p2	BC120502|Ccdc47|67163|coiled-coil domain containing 47	BC137681|Ccdc47|67163|coiled-coil domain containing 47	AK011882|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr15_+_100959358_100959377	0.0606732	HOX{A6,A7,B6,B7}.p2	Z31664|Acvrl1|11482|activin A receptor, type II-like 1
mm9_v1_chrY_-_582062_582201	0.0605967	HOX{A6,A7,B6,B7}.p2	AK162410|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK220463|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK155922|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AF057367|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	BC053061|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK043154|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	NM_009484|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142344|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142512|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm9_v1_chr11_-_87172541_87172586	0.060535	HOX{A6,A7,B6,B7}.p2	AK046962|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr11_-_120668581_120668636	0.0603979	HOX{A6,A7,B6,B7}.p2	AK078721|Fasn|14104|fatty acid synthase
mm9_v1_chr8_-_35153699_35153753	0.0603571	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_+_17787239_17787293	0.0602785	HOX{A6,A7,B6,B7}.p2	AK030630|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	NM_025479|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK012770|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK011919|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK141333|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	BC139338|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	BC139341|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene
mm9_v1_chrX_+_13209894_13209986	0.0601958	HOX{A6,A7,B6,B7}.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr15_+_96199877_96199934	0.0601101	HOX{A6,A7,B6,B7}.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr12_+_87027595_87027673	0.0599205	HOX{A6,A7,B6,B7}.p2	AK018587|Batf|53314|basic leucine zipper transcription factor, ATF-like	AF017021|Batf|53314|basic leucine zipper transcription factor, ATF-like	NM_016767|Batf|53314|basic leucine zipper transcription factor, ATF-like
mm9_v1_chr16_-_38550174_38550326	0.0598573	HOX{A6,A7,B6,B7}.p2	AK197458|Poglut1|224143|protein O-glucosyltransferase 1	AK215456|Poglut1|224143|protein O-glucosyltransferase 1	AK216766|Poglut1|224143|protein O-glucosyltransferase 1	AK036224|Poglut1|224143|protein O-glucosyltransferase 1	NM_172380|Poglut1|224143|protein O-glucosyltransferase 1	AK031608|Poglut1|224143|protein O-glucosyltransferase 1	AK041321|Poglut1|224143|protein O-glucosyltransferase 1	AK045278|Poglut1|224143|protein O-glucosyltransferase 1	AK035948|Poglut1|224143|protein O-glucosyltransferase 1	BC026809|Poglut1|224143|protein O-glucosyltransferase 1	AK082556|Poglut1|224143|protein O-glucosyltransferase 1	AK167641|Poglut1|224143|protein O-glucosyltransferase 1	AK079886|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr4_+_150239183_150239284	0.0598513	HOX{A6,A7,B6,B7}.p2	AK205245|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr11_+_100987576_100987674	0.0598398	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_48597232_48597434	0.0597994	HOX{A6,A7,B6,B7}.p2	AK134199|Gimap8|243374|GTPase, IMAP family member 8	NM_001077410|Gimap8|243374|GTPase, IMAP family member 8	AB178029|Gimap8|243374|GTPase, IMAP family member 8	AK155985|Gimap8|243374|GTPase, IMAP family member 8	NM_212486|Gimap8|243374|GTPase, IMAP family member 8	BC137943|Gimap8|243374|GTPase, IMAP family member 8	BC137944|Gimap8|243374|GTPase, IMAP family member 8	AJ617674|Gimap8|243374|GTPase, IMAP family member 8
mm9_v1_chr15_-_77759356_77759437	0.0597651	HOX{A6,A7,B6,B7}.p2	AK167925|Txn2|56551|thioredoxin 2	U85089|Txn2|56551|thioredoxin 2	AK167754|Txn2|56551|thioredoxin 2	AK168322|Txn2|56551|thioredoxin 2	AK002358|Txn2|56551|thioredoxin 2	AK147164|Txn2|56551|thioredoxin 2	AK090199|Txn2|56551|thioredoxin 2	AK149855|Txn2|56551|thioredoxin 2	BC068182|Txn2|56551|thioredoxin 2	AK010917|Txn2|56551|thioredoxin 2	NM_019913|Txn2|56551|thioredoxin 2	AK160591|Txn2|56551|thioredoxin 2
mm9_v1_chr4_+_5726856_5726857	0.0597612	HOX{A6,A7,B6,B7}.p2	AK049898|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr5_-_131783942_131783957	0.0596651	HOX{A6,A7,B6,B7}.p2	AK087726|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr18_+_21159829_21159841	0.0595671	HOX{A6,A7,B6,B7}.p2	AB025010|Rnf138|56515|ring finger protein 138	AB025011|Rnf138|56515|ring finger protein 138	NM_019706|Rnf138|56515|ring finger protein 138	NM_207623|Rnf138|56515|ring finger protein 138
mm9_v1_chr2_+_31543895_31544075	0.0592906	HOX{A6,A7,B6,B7}.p2	AK083248|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK166210|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK090247|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK166028|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK088252|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	NM_001112703|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase
mm9_v1_chr4_+_116381175_116381228	0.0592587	HOX{A6,A7,B6,B7}.p2	AK002768|Ccdc163|68394|coiled-coil domain containing 163	AK016995|Ccdc163|68394|coiled-coil domain containing 163
mm9_v1_chr10_+_128184908_128185017	0.0592529	HOX{A6,A7,B6,B7}.p2	NM_030100|Wibg|78428|within bgcn homolog (Drosophila)	AK020702|Wibg|78428|within bgcn homolog (Drosophila)	AJ459407|Wibg|78428|within bgcn homolog (Drosophila)
mm9_v1_chr5_-_138227888_138227970	0.0591579	HOX{A6,A7,B6,B7}.p2	AK154415|Mepce|231803|methylphosphate capping enzyme	NM_144913|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr3_-_87689483_87689550	0.0591471	HOX{A6,A7,B6,B7}.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr5_+_125365789_125365870	0.0589587	HOX{A6,A7,B6,B7}.p2	BC096550|Zfp664|269704|zinc finger protein 664
mm9_v1_chr12_-_31596396_31596507	0.0589096	HOX{A6,A7,B6,B7}.p2	Y17343|Acp1|11431|acid phosphatase 1, soluble	Y17345|Acp1|11431|acid phosphatase 1, soluble	BC093527|Acp1|11431|acid phosphatase 1, soluble	BC111893|Acp1|11431|acid phosphatase 1, soluble	BC112413|Acp1|11431|acid phosphatase 1, soluble	BC132258|Acp1|11431|acid phosphatase 1, soluble	BC145199|Acp1|11431|acid phosphatase 1, soluble	AK082955|Acp1|11431|acid phosphatase 1, soluble	BC096368|Acp1|11431|acid phosphatase 1, soluble	AK019186|Acp1|11431|acid phosphatase 1, soluble	AK170284|Acp1|11431|acid phosphatase 1, soluble	AK167887|Acp1|11431|acid phosphatase 1, soluble	AK014603|Acp1|11431|acid phosphatase 1, soluble	AK136144|Acp1|11431|acid phosphatase 1, soluble	AK018329|Acp1|11431|acid phosphatase 1, soluble	AK152429|Acp1|11431|acid phosphatase 1, soluble	NM_001110239|Acp1|11431|acid phosphatase 1, soluble	NM_021330|Acp1|11431|acid phosphatase 1, soluble
mm9_v1_chr1_+_133724553_133724859	0.0588283	HOX{A6,A7,B6,B7}.p2	BC096596|Slc41a1|98396|solute carrier family 41, member 1	AK089802|Slc41a1|98396|solute carrier family 41, member 1	NM_173865|Slc41a1|98396|solute carrier family 41, member 1	AK045861|Slc41a1|98396|solute carrier family 41, member 1	AK154819|Slc41a1|98396|solute carrier family 41, member 1	BC042724|Slc41a1|98396|solute carrier family 41, member 1	BC116280|Slc41a1|98396|solute carrier family 41, member 1	BC116281|Slc41a1|98396|solute carrier family 41, member 1	AK039371|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr9_-_103664100_103664222	0.058722	HOX{A6,A7,B6,B7}.p2	BC052085|Tmem108|81907|transmembrane protein 108	AK077586|Tmem108|81907|transmembrane protein 108	AK044989|Tmem108|81907|transmembrane protein 108	AK047474|Tmem108|81907|transmembrane protein 108	AK086266|Tmem108|81907|transmembrane protein 108	AK141589|Tmem108|81907|transmembrane protein 108	AK052330|Tmem108|81907|transmembrane protein 108	NM_178638|Tmem108|81907|transmembrane protein 108
mm9_v1_chr6_-_23600205_23600304	0.0586865	HOX{A6,A7,B6,B7}.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr3_-_135271220_135271233	0.0585385	HOX{A6,A7,B6,B7}.p2	L28117|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr3_+_58380577_58380636	0.0585007	HOX{A6,A7,B6,B7}.p2	NM_001040396|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK017528|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK032838|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK047958|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC132453|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC138424|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK013022|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC019970|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK146778|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene
mm9_v1_chr19_+_8840883_8840977	0.058375	HOX{A6,A7,B6,B7}.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr7_-_28835041_28835115	0.058285	HOX{A6,A7,B6,B7}.p2	BC012708|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167041|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	BC092265|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	L76223|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK150989|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160718|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167528|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169224|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK077507|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160644|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169244|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK050677|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK153991|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	NM_011874|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm9_v1_chr14_+_99697896_99697918	0.0579601	HOX{A6,A7,B6,B7}.p2	AK051409|Klf5|12224|Kruppel-like factor 5	NM_009769|Klf5|12224|Kruppel-like factor 5	BC011307|Klf5|12224|Kruppel-like factor 5	BC012958|Klf5|12224|Kruppel-like factor 5
mm9_v1_chr6_-_83781704_83781750	0.0579067	HOX{A6,A7,B6,B7}.p2	AK140686|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK159287|Paip2b|232164|poly(A) binding protein interacting protein 2B	NM_146169|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr6_-_131197295_131197381	0.05779	HOX{A6,A7,B6,B7}.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chr18_+_32416881_32416904	0.0574442	HOX{A6,A7,B6,B7}.p2	BC024446|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr9_-_111174074_111174111	0.0573655	HOX{A6,A7,B6,B7}.p2	AK038265|Mlh1|17350|mutL homolog 1 (E. coli)	NM_026810|Mlh1|17350|mutL homolog 1 (E. coli)
mm9_v1_chr2_+_155833791_155833870	0.0573291	HOX{A6,A7,B6,B7}.p2	BC057130|Ergic3|66366|ERGIC and golgi 3	AK050285|Ergic3|66366|ERGIC and golgi 3	BC043720|Ergic3|66366|ERGIC and golgi 3	AK009350|Ergic3|66366|ERGIC and golgi 3	AK013942|Ergic3|66366|ERGIC and golgi 3	NM_025516|Ergic3|66366|ERGIC and golgi 3
mm9_v1_chr17_-_25981402_25981452	0.0573167	HOX{A6,A7,B6,B7}.p2	AK142183|Rhot2|214952|ras homolog gene family, member T2	BC029777|Rhot2|214952|ras homolog gene family, member T2	BC034062|Rhot2|214952|ras homolog gene family, member T2
mm9_v1_chr16_-_85550617_85550674	0.0572308	HOX{A6,A7,B6,B7}.p2	BC099957|Cyyr1|224405|cysteine and tyrosine-rich protein 1	NM_144853|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK031840|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AY061854|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK171936|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK163137|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK158088|Cyyr1|224405|cysteine and tyrosine-rich protein 1
mm9_v1_chr18_+_37911236_37911432	0.0571954	HOX{A6,A7,B6,B7}.p2	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr1_-_97564064_97564129	0.0571628	HOX{A6,A7,B6,B7}.p2	AK041723|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK003690|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr17_-_35971652_35971809	0.0571506	HOX{A6,A7,B6,B7}.p2	AK080778|Tubb5|22154|tubulin, beta 5	AK088137|Tubb5|22154|tubulin, beta 5
mm9_v1_chr6_-_6167034_6167063	0.0570359	HOX{A6,A7,B6,B7}.p2	AK002829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK012670|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr9_+_39421128_39421153	0.0568284	HOX{A6,A7,B6,B7}.p2	BC125353|Olfr148|258498|olfactory receptor 148	BC132239|Olfr148|258498|olfactory receptor 148	NM_146505|Olfr148|258498|olfactory receptor 148
mm9_v1_chr17_-_86566816_86566826	0.0567435	HOX{A6,A7,B6,B7}.p2	AK135560|Gm5817|545228|predicted gene 5817
mm9_v1_chr7_-_53176218_53176229	0.0566282	HOX{A6,A7,B6,B7}.p2	AK146939|Emp3|13732|epithelial membrane protein 3	NM_001146346|Emp3|13732|epithelial membrane protein 3
mm9_v1_chr11_+_59918407_59918514	0.0565846	HOX{A6,A7,B6,B7}.p2	BC049785|Rai1|19377|retinoic acid induced 1	NM_009021|Rai1|19377|retinoic acid induced 1
mm9_v1_chr2_+_150735306_150735352	0.0564319	HOX{A6,A7,B6,B7}.p2	NM_001163476|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	NM_027014|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	AK013116|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	BC027537|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)
mm9_v1_chr7_-_20188580_20188591	0.056307	HOX{A6,A7,B6,B7}.p2	AB080582|Clasrp|53609|CLK4-associating serine/arginine rich protein	AB080583|Clasrp|53609|CLK4-associating serine/arginine rich protein
mm9_v1_chr19_-_32285445_32285502	0.0558163	HOX{A6,A7,B6,B7}.p2	AK079254|Sgms1|208449|sphingomyelin synthase 1	AK133967|Sgms1|208449|sphingomyelin synthase 1	BC019443|Sgms1|208449|sphingomyelin synthase 1	AK150272|Sgms1|208449|sphingomyelin synthase 1	AK152312|Sgms1|208449|sphingomyelin synthase 1	AK160539|Sgms1|208449|sphingomyelin synthase 1	NM_001168526|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr19_-_8787313_8787393	0.0557146	HOX{A6,A7,B6,B7}.p2	AK183775|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK180963|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr13_-_23461025_23461082	0.055665	HOX{A6,A7,B6,B7}.p2	BC043711|Zfp322a|218100|zinc finger protein 322A	AK162608|Zfp322a|218100|zinc finger protein 322A	AK170259|Zfp322a|218100|zinc finger protein 322A	AK170525|Zfp322a|218100|zinc finger protein 322A	NM_001111107|Zfp322a|218100|zinc finger protein 322A	NM_172586|Zfp322a|218100|zinc finger protein 322A	AK036302|Zfp322a|218100|zinc finger protein 322A	AK036877|Zfp322a|218100|zinc finger protein 322A
mm9_v1_chr13_-_23790310_23790328	0.0556294	HOX{A6,A7,B6,B7}.p2	BC115451|Hist1h4c|319155|histone cluster 1, H4c	BC115450|Hist1h4c|319155|histone cluster 1, H4c	BC139809|Hist1h4c|319155|histone cluster 1, H4c	NM_178208|Hist1h4c|319155|histone cluster 1, H4c
mm9_v1_chr18_-_21458623_21458645	0.0555272	HOX{A6,A7,B6,B7}.p2	AK220564|Fam59a|381126|family with sequence similarity 59, member A	AK148318|Fam59a|381126|family with sequence similarity 59, member A	NM_001033445|Fam59a|381126|family with sequence similarity 59, member A
mm9_v1_chr5_+_34339258_34339295	0.0554683	HOX{A6,A7,B6,B7}.p2	AK147703|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr7_-_52125157_52125184	0.0554605	HOX{A6,A7,B6,B7}.p2	BC024632|Ptov1|84113|prostate tumor over expressed gene 1	NM_133949|Ptov1|84113|prostate tumor over expressed gene 1
mm9_v1_chr1_-_164790057_164790069	0.0553735	HOX{A6,A7,B6,B7}.p2	AK143940|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr9_-_21602942_21603000	0.0552771	HOX{A6,A7,B6,B7}.p2	BC010245|Kank2|235041|KN motif and ankyrin repeat domains 2	AK045492|Kank2|235041|KN motif and ankyrin repeat domains 2	BC006647|Kank2|235041|KN motif and ankyrin repeat domains 2	AK031324|Kank2|235041|KN motif and ankyrin repeat domains 2	AK049288|Kank2|235041|KN motif and ankyrin repeat domains 2	NM_145611|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr1_+_182837982_182838044	0.0552049	HOX{A6,A7,B6,B7}.p2	AK187139|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr8_+_97366546_97366639	0.0551449	HOX{A6,A7,B6,B7}.p2	AK200178|Coq9|67914|coenzyme Q9 homolog (yeast)
mm9_v1_chr8_+_113557763_113557896	0.0550896	HOX{A6,A7,B6,B7}.p2	AK087291|Aars|234734|alanyl-tRNA synthetase	AK158139|Aars|234734|alanyl-tRNA synthetase	AK085725|Aars|234734|alanyl-tRNA synthetase	AY223875|Aars|234734|alanyl-tRNA synthetase	AK150227|Aars|234734|alanyl-tRNA synthetase	AK036738|Aars|234734|alanyl-tRNA synthetase	BC033273|Aars|234734|alanyl-tRNA synthetase	NM_146217|Aars|234734|alanyl-tRNA synthetase	AK183614|Aars|234734|alanyl-tRNA synthetase
mm9_v1_chr17_-_30729995_30730086	0.0550859	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_71326295_71326316	0.055022	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_-_51323311_51323452	0.054906	HOX{A6,A7,B6,B7}.p2	AK164869|Setd7|73251|SET domain containing (lysine methyltransferase) 7
mm9_v1_chr16_+_56075576_56075640	0.0548737	HOX{A6,A7,B6,B7}.p2	AK012740|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK085060|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK013090|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK122542|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK010813|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164100|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK020068|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK083086|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164354|Senp7|66315|SUMO1/sentrin specific peptidase 7	BC058593|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr15_-_103196944_103197034	0.0547958	HOX{A6,A7,B6,B7}.p2	AK144921|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	AK152594|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	AK148138|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	AK142241|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)
mm9_v1_chr11_-_115794529_115794818	0.0546841	HOX{A6,A7,B6,B7}.p2	BC066176|Recql5|170472|RecQ protein-like 5	BC053086|Recql5|170472|RecQ protein-like 5	BC060070|Recql5|170472|RecQ protein-like 5	BC059000|Recql5|170472|RecQ protein-like 5	AK029060|Recql5|170472|RecQ protein-like 5	AK083513|Recql5|170472|RecQ protein-like 5
mm9_v1_chr10_+_128787620_128787620	0.0546836	HOX{A6,A7,B6,B7}.p2	NM_001011797|Olfr782|257985|olfactory receptor 782
mm9_v1_chr2_-_34655238_34655332	0.054641	HOX{A6,A7,B6,B7}.p2	BC019800|Rabepk|227746|Rab9 effector protein with kelch motifs	AK035343|Rabepk|227746|Rab9 effector protein with kelch motifs	NM_145522|Rabepk|227746|Rab9 effector protein with kelch motifs	AK153022|Rabepk|227746|Rab9 effector protein with kelch motifs
mm9_v1_chr17_-_45730551_45730602	0.0544866	HOX{A6,A7,B6,B7}.p2	BC004828|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr10_-_120851345_120851478	0.0542505	HOX{A6,A7,B6,B7}.p2	AK196922|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3
mm9_v1_chr17_+_34056555_34056581	0.0541817	HOX{A6,A7,B6,B7}.p2	AK014566|Tapbp|21356|TAP binding protein	AF043943|Tapbp|21356|TAP binding protein
mm9_v1_chr15_-_12669677_12669687	0.0541081	HOX{A6,A7,B6,B7}.p2	AK159017|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr19_+_8907691_8907773	0.0539956	HOX{A6,A7,B6,B7}.p2	AK004010|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr9_-_53475167_53475249	0.0539872	HOX{A6,A7,B6,B7}.p2	AK014894|Cul5|75717|cullin 5	BC037054|Cul5|75717|cullin 5
mm9_v1_chr10_-_19627418_19627496	0.0539677	HOX{A6,A7,B6,B7}.p2	AK160195|Pex7|18634|peroxisomal biogenesis factor 7	BC132213|Pex7|18634|peroxisomal biogenesis factor 7	BC132503|Pex7|18634|peroxisomal biogenesis factor 7	BC145300|Pex7|18634|peroxisomal biogenesis factor 7	U69171|Pex7|18634|peroxisomal biogenesis factor 7	AK053868|Pex7|18634|peroxisomal biogenesis factor 7	AK004687|Pex7|18634|peroxisomal biogenesis factor 7	NM_001161825|Pex7|18634|peroxisomal biogenesis factor 7	NM_008822|Pex7|18634|peroxisomal biogenesis factor 7
mm9_v1_chr8_-_108224992_108225001	0.0537073	HOX{A6,A7,B6,B7}.p2	NM_001012638|Acd|497652|adrenocortical dysplasia	AK170606|Acd|497652|adrenocortical dysplasia
mm9_v1_chr14_-_40286109_40286196	0.0536496	HOX{A6,A7,B6,B7}.p2	BC137838|Nrg3|18183|neuregulin 3	BC144964|Nrg3|18183|neuregulin 3
mm9_v1_chr1_-_172145521_172145534	0.0536204	HOX{A6,A7,B6,B7}.p2	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr16_+_56477956_56478012	0.0535769	HOX{A6,A7,B6,B7}.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr17_+_70318387_70318428	0.0535327	HOX{A6,A7,B6,B7}.p2	AK220515|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr17_+_69506083_69506155	0.0533587	HOX{A6,A7,B6,B7}.p2	BC079858|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	AK031156|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	AF152247|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	AK053532|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	NM_013813|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3
mm9_v1_chr6_-_12699189_12699252	0.0533494	HOX{A6,A7,B6,B7}.p2	NM_001164805|Thsd7a|330267|thrombospondin, type I, domain containing 7A
mm9_v1_chr7_+_135667095_135667183	0.0533428	HOX{A6,A7,B6,B7}.p2	NM_013863|Bag3|29810|BCL2-associated athanogene 3	AB041583|Bag3|29810|BCL2-associated athanogene 3	AK171734|Bag3|29810|BCL2-associated athanogene 3	BC145765|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr7_-_97605681_97605720	0.0532654	HOX{A6,A7,B6,B7}.p2	BC023171|Tmem126a|66271|transmembrane protein 126A	AK005343|Tmem126a|66271|transmembrane protein 126A	AK050267|Tmem126a|66271|transmembrane protein 126A	AK007559|Tmem126a|66271|transmembrane protein 126A	NM_025460|Tmem126a|66271|transmembrane protein 126A
mm9_v1_chr9_+_40338739_40338802	0.0531445	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_6683113_6683136	0.0530528	HOX{A6,A7,B6,B7}.p2	BC085183|Peg3|18616|paternally expressed 3	BC072661|Peg3|18616|paternally expressed 3	AB003040|Peg3|18616|paternally expressed 3	AK044602|Peg3|18616|paternally expressed 3	AK053523|Peg3|18616|paternally expressed 3	AK141217|Peg3|18616|paternally expressed 3	NM_008817|Peg3|18616|paternally expressed 3	AK163845|Peg3|18616|paternally expressed 3
mm9_v1_chrX_-_133275812_133275890	0.0530103	HOX{A6,A7,B6,B7}.p2	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr5_-_73647663_73647809	0.0529743	HOX{A6,A7,B6,B7}.p2	AK033493|Fryl|72313|furry homolog-like (Drosophila)	AK038719|Fryl|72313|furry homolog-like (Drosophila)
mm9_v1_chr13_+_56539679_56539751	0.0529094	HOX{A6,A7,B6,B7}.p2	AK054181|Slc25a48|328258|solute carrier family 25, member 48	NM_177809|Slc25a48|328258|solute carrier family 25, member 48	BC107250|Slc25a48|328258|solute carrier family 25, member 48	BC107251|Slc25a48|328258|solute carrier family 25, member 48
mm9_v1_chr14_+_67852128_67852128	0.0528818	HOX{A6,A7,B6,B7}.p2	AK053013|Ebf2|13592|early B-cell factor 2	NM_010095|Ebf2|13592|early B-cell factor 2
mm9_v1_chr7_-_125386862_125387193	0.0527916	HOX{A6,A7,B6,B7}.p2	AK220328|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK041264|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK047829|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK157798|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK049391|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	NM_001031814|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm9_v1_chr2_+_32426415_32426445	0.0527563	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_+_47218048_47218098	0.0527528	HOX{A6,A7,B6,B7}.p2	AK038964|Rnf144b|218215|ring finger protein 144B	AK053529|Rnf144b|218215|ring finger protein 144B	NM_146042|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr17_+_86567513_86567537	0.052658	HOX{A6,A7,B6,B7}.p2	AK085351|Prkce|18754|protein kinase C, epsilon
mm9_v1_chr4_-_118081793_118081882	0.0524593	HOX{A6,A7,B6,B7}.p2	GU433214|Szt2|230676|seizure threshold 2	FJ998170|Szt2|230676|seizure threshold 2	NM_198170|Szt2|230676|seizure threshold 2
mm9_v1_chr2_+_13501725_13501846	0.052327	HOX{A6,A7,B6,B7}.p2	AK205443|Vim|22352|vimentin
mm9_v1_chr2_-_152656236_152656402	0.0520604	HOX{A6,A7,B6,B7}.p2	L35049|Bcl2l1|12048|BCL2-like 1	U51279|Bcl2l1|12048|BCL2-like 1	AK172250|Bcl2l1|12048|BCL2-like 1	U51277|Bcl2l1|12048|BCL2-like 1	AK146461|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr2_+_88231404_88231405	0.0519863	HOX{A6,A7,B6,B7}.p2	BC140109|Olfr1178|258203|olfactory receptor 1178	BC140153|Olfr1178|258203|olfactory receptor 1178	BC143174|Olfr1178|258203|olfactory receptor 1178	NM_001011868|Olfr1178|258203|olfactory receptor 1178
mm9_v1_chr2_-_151566894_151566981	0.0519721	HOX{A6,A7,B6,B7}.p2	BC131928|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	BC131930|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1
mm9_v1_chr14_+_63756868_63756897	0.0519341	HOX{A6,A7,B6,B7}.p2	AK192818|Ctsb|13030|cathepsin B	AK196522|Ctsb|13030|cathepsin B
mm9_v1_chr14_+_67530044_67530096	0.0518671	HOX{A6,A7,B6,B7}.p2	AK043910|Pnma2|239157|paraneoplastic antigen MA2	NM_175498|Pnma2|239157|paraneoplastic antigen MA2	AK220357|Pnma2|239157|paraneoplastic antigen MA2	AK043718|Pnma2|239157|paraneoplastic antigen MA2
mm9_v1_chr10_+_128258826_128258995	0.0517734	HOX{A6,A7,B6,B7}.p2	NM_025364|Sarnp|66118|SAP domain containing ribonucleoprotein	AK146248|Sarnp|66118|SAP domain containing ribonucleoprotein	AK018773|Sarnp|66118|SAP domain containing ribonucleoprotein	BC157909|Sarnp|66118|SAP domain containing ribonucleoprotein	BC158023|Sarnp|66118|SAP domain containing ribonucleoprotein	BC172063|Sarnp|66118|SAP domain containing ribonucleoprotein	AK003453|Sarnp|66118|SAP domain containing ribonucleoprotein	AK088266|Sarnp|66118|SAP domain containing ribonucleoprotein	BC027510|Sarnp|66118|SAP domain containing ribonucleoprotein	BC094393|Sarnp|66118|SAP domain containing ribonucleoprotein	AK212934|Sarnp|66118|SAP domain containing ribonucleoprotein
mm9_v1_chr11_-_4494815_4494822	0.0517485	HOX{A6,A7,B6,B7}.p2	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr15_-_76307654_76307703	0.0517188	HOX{A6,A7,B6,B7}.p2	BC012693|Bop1|12181|block of proliferation 1	AK129058|Bop1|12181|block of proliferation 1	AK012448|Bop1|12181|block of proliferation 1	AK167829|Bop1|12181|block of proliferation 1	AK079627|Bop1|12181|block of proliferation 1	AK168127|Bop1|12181|block of proliferation 1	AK167110|Bop1|12181|block of proliferation 1	AK167225|Bop1|12181|block of proliferation 1	AK167878|Bop1|12181|block of proliferation 1	NM_013481|Bop1|12181|block of proliferation 1	U77415|Bop1|12181|block of proliferation 1	AK144095|Bop1|12181|block of proliferation 1
mm9_v1_chr3_-_100489393_100489406	0.0516148	HOX{A6,A7,B6,B7}.p2	AK153336|Man1a2|17156|mannosidase, alpha, class 1A, member 2	NM_010763|Man1a2|17156|mannosidase, alpha, class 1A, member 2
mm9_v1_chr11_-_47192793_47192803	0.0514333	HOX{A6,A7,B6,B7}.p2	BC130019|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)	AK040974|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)	NM_011891|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm9_v1_chr3_-_103545641_103545788	0.0513974	HOX{A6,A7,B6,B7}.p2	AK159746|Hipk1|15257|homeodomain interacting protein kinase 1	AK076611|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr2_-_91516101_91516113	0.0512891	HOX{A6,A7,B6,B7}.p2	BC024457|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr18_+_34569074_34569091	0.0512431	HOX{A6,A7,B6,B7}.p2	AF182033|Pkd2l2|53871|polycystic kidney disease 2-like 2	NM_001163004|Pkd2l2|53871|polycystic kidney disease 2-like 2	NM_016927|Pkd2l2|53871|polycystic kidney disease 2-like 2	AK133423|Pkd2l2|53871|polycystic kidney disease 2-like 2	AK142697|Pkd2l2|53871|polycystic kidney disease 2-like 2	BC138717|Pkd2l2|53871|polycystic kidney disease 2-like 2
mm9_v1_chrX_-_56387565_56387612	0.0510246	HOX{A6,A7,B6,B7}.p2	BC018238|Fgf13|14168|fibroblast growth factor 13	NM_010200|Fgf13|14168|fibroblast growth factor 13
mm9_v1_chr7_+_31742368_31742427	0.0510068	HOX{A6,A7,B6,B7}.p2	AK154275|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr14_-_71035662_71035784	0.0509488	HOX{A6,A7,B6,B7}.p2	AK149301|Epb4.9|13829|erythrocyte protein band 4.9	AK158744|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr10_+_84085020_84085046	0.0508409	HOX{A6,A7,B6,B7}.p2	AK165886|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B
mm9_v1_chr7_-_109835767_109835842	0.0504756	HOX{A6,A7,B6,B7}.p2	BC034249|Trim68|101700|tripartite motif-containing 68	AK164544|Trim68|101700|tripartite motif-containing 68	AK089546|Trim68|101700|tripartite motif-containing 68	AK155267|Trim68|101700|tripartite motif-containing 68	NM_198012|Trim68|101700|tripartite motif-containing 68
mm9_v1_chr4_+_140522412_140522429	0.0504639	HOX{A6,A7,B6,B7}.p2	DQ403000|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
mm9_v1_chr18_+_32056465_32056564	0.0503275	HOX{A6,A7,B6,B7}.p2	BC003939|Wdr33|74320|WD repeat domain 33
mm9_v1_chr10_+_127520319_127520396	0.050245	HOX{A6,A7,B6,B7}.p2	AK166525|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK002621|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK011035|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK083276|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK145684|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK148891|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK150599|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK151081|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK152788|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK152976|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK159737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK160608|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK166603|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK166979|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK167119|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK168941|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK169184|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK010314|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK159978|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK167764|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	NM_016774|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK151600|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK152730|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK159444|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK167728|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK167160|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK084009|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK153099|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK160199|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK164383|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK168692|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	BC037127|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	BC046616|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AF030559|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	BC013253|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr9_-_7932402_7932403	0.0501035	HOX{A6,A7,B6,B7}.p2	AK212471|Yap1|22601|yes-associated protein 1	AK215870|Yap1|22601|yes-associated protein 1
mm9_v1_chr1_+_129101551_129101562	0.0498099	HOX{A6,A7,B6,B7}.p2	NM_145128|Mgat5|107895|mannoside acetylglucosaminyltransferase 5
mm9_v1_chr17_+_5341444_5341585	0.0496722	HOX{A6,A7,B6,B7}.p2	AK135725|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK033272|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK139800|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr11_-_65083442_65083498	0.0495637	HOX{A6,A7,B6,B7}.p2	AF384055|Myocd|214384|myocardin	AY303755|Myocd|214384|myocardin	NM_145136|Myocd|214384|myocardin	NM_146386|Myocd|214384|myocardin	AK142216|Myocd|214384|myocardin
mm9_v1_chr4_+_62021760_62021858	0.0495609	HOX{A6,A7,B6,B7}.p2	AK046835|Slc31a1|20529|solute carrier family 31, member 1	AK170285|Slc31a1|20529|solute carrier family 31, member 1	BC058227|Slc31a1|20529|solute carrier family 31, member 1	BC034674|Slc31a1|20529|solute carrier family 31, member 1	AK203972|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr14_+_56159102_56159102	0.0495514	HOX{A6,A7,B6,B7}.p2	AK030501|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)	NM_028994|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)
mm9_v1_chr9_-_14587400_14587407	0.049532	HOX{A6,A7,B6,B7}.p2	BC020398|Ankrd49|56503|ankyrin repeat domain 49	BC019777|Ankrd49|56503|ankyrin repeat domain 49	NM_019683|Ankrd49|56503|ankyrin repeat domain 49
mm9_v1_chr6_-_91423388_91423454	0.0494988	HOX{A6,A7,B6,B7}.p2	AK010479|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	BC019405|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	NM_133928|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4
mm9_v1_chr10_+_59465552_59465606	0.0494746	HOX{A6,A7,B6,B7}.p2	AK053811|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	BC030905|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	NM_026937|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK144614|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK171958|Ascc1|69090|activating signal cointegrator 1 complex subunit 1
mm9_v1_chr11_-_102180374_102180491	0.049168	HOX{A6,A7,B6,B7}.p2	BC004676|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	NM_011551|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr11_+_3795221_3795283	0.0491468	HOX{A6,A7,B6,B7}.p2	NM_173745|Dusp18|75219|dual specificity phosphatase 18	AK079664|Dusp18|75219|dual specificity phosphatase 18	BC020036|Dusp18|75219|dual specificity phosphatase 18	AK015917|Dusp18|75219|dual specificity phosphatase 18	AK081916|Dusp18|75219|dual specificity phosphatase 18
mm9_v1_chr18_+_56591785_56591811	0.0491325	HOX{A6,A7,B6,B7}.p2	NM_026240|Gramd3|107022|GRAM domain containing 3	AK018691|Gramd3|107022|GRAM domain containing 3	AK164050|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr4_-_148800321_148800361	0.0489933	HOX{A6,A7,B6,B7}.p2	AK083409|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	AK029914|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chrX_+_71415963_71415984	0.0489582	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_119456102_119456195	0.0487625	HOX{A6,A7,B6,B7}.p2	BC009096|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr7_-_125832234_125832286	0.0486314	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_-_56290697_56290758	0.0485405	HOX{A6,A7,B6,B7}.p2	D10918|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK147080|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	BC004625|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK146732|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	NM_008683|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8
mm9_v1_chr10_+_127764070_127764180	0.0481785	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_79902901_79902965	0.0481664	HOX{A6,A7,B6,B7}.p2	NM_001029856|Atad5|237877|ATPase family, AAA domain containing 5	BC038279|Atad5|237877|ATPase family, AAA domain containing 5	AK053857|Atad5|237877|ATPase family, AAA domain containing 5	AK085211|Atad5|237877|ATPase family, AAA domain containing 5	AY557610|Atad5|237877|ATPase family, AAA domain containing 5	AK165945|Atad5|237877|ATPase family, AAA domain containing 5	AK048355|Atad5|237877|ATPase family, AAA domain containing 5	AK032814|Atad5|237877|ATPase family, AAA domain containing 5
mm9_v1_chr6_-_113433154_113433156	0.0480624	HOX{A6,A7,B6,B7}.p2	AK033890|Il17rc|171095|interleukin 17 receptor C	AK040950|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr3_-_107847757_107847776	0.0480322	HOX{A6,A7,B6,B7}.p2	NM_026764|Gstm4|14865|glutathione S-transferase, mu 4	AK003418|Gstm4|14865|glutathione S-transferase, mu 4	NM_001160411|Gstm4|14865|glutathione S-transferase, mu 4
mm9_v1_chr14_+_105657949_105657967	0.0479446	HOX{A6,A7,B6,B7}.p2	AK132235|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr8_+_86423968_86424035	0.0478448	HOX{A6,A7,B6,B7}.p2	NM_181039|Lphn1|330814|latrophilin 1	AK147455|Lphn1|330814|latrophilin 1
mm9_v1_chr5_-_5694325_5694567	0.04761	HOX{A6,A7,B6,B7}.p2	BC043459|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150881|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150889|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK166162|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK052981|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_028734|Steap2|74051|six transmembrane epithelial antigen of prostate 2
mm9_v1_chr12_-_103981869_103981884	0.0475423	HOX{A6,A7,B6,B7}.p2	NM_001142937|Moap1|64113|modulator of apoptosis 1	NM_022323|Moap1|64113|modulator of apoptosis 1
mm9_v1_chr2_-_164008333_164008477	0.0475338	HOX{A6,A7,B6,B7}.p2	AK075896|Wfdc5|209232|WAP four-disulfide core domain 5	AK131906|Wfdc5|209232|WAP four-disulfide core domain 5	AK131905|Wfdc5|209232|WAP four-disulfide core domain 5	AY669505|Wfdc5|209232|WAP four-disulfide core domain 5	BC019734|Wfdc5|209232|WAP four-disulfide core domain 5	NM_145369|Wfdc5|209232|WAP four-disulfide core domain 5
mm9_v1_chr4_-_129118034_129118085	0.047446	HOX{A6,A7,B6,B7}.p2	BC023839|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK140914|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK163930|Zbtb8b|215627|zinc finger and BTB domain containing 8b	NM_153541|Zbtb8b|215627|zinc finger and BTB domain containing 8b
mm9_v1_chr1_-_121733923_121733951	0.0474196	HOX{A6,A7,B6,B7}.p2	AK046683|Ptpn4|19258|protein tyrosine phosphatase, non-receptor type 4
mm9_v1_chr7_-_111233591_111233690	0.0473422	HOX{A6,A7,B6,B7}.p2	NM_207144|Olfr645|258247|olfactory receptor 645	BC132009|Olfr645|258247|olfactory receptor 645	BC132011|Olfr645|258247|olfactory receptor 645
mm9_v1_chr11_+_28753190_28753243	0.0473407	HOX{A6,A7,B6,B7}.p2	AK077302|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	NM_146015|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	AY251056|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr6_-_124688630_124688780	0.0472767	HOX{A6,A7,B6,B7}.p2	AK150509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK132509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	NM_001077705|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6
mm9_v1_chr7_-_52317021_52317119	0.0472196	HOX{A6,A7,B6,B7}.p2	BC025098|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2	NM_022999|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr3_+_88125464_88125582	0.0471677	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_102889847_102889897	0.0470988	HOX{A6,A7,B6,B7}.p2	AF043326|Nmt1|18107|N-myristoyltransferase 1	AK146523|Nmt1|18107|N-myristoyltransferase 1	BC021635|Nmt1|18107|N-myristoyltransferase 1	BC016526|Nmt1|18107|N-myristoyltransferase 1	NM_008707|Nmt1|18107|N-myristoyltransferase 1
mm9_v1_chr10_-_59465798_59465834	0.0470791	HOX{A6,A7,B6,B7}.p2	AK088376|Anapc16|52717|anaphase promoting complex subunit 16
mm9_v1_chr13_+_56805028_56805028	0.0469258	HOX{A6,A7,B6,B7}.p2	AK082997|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164042|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chrX_+_101609180_101609330	0.0468636	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_66986637_66986648	0.0468115	HOX{A6,A7,B6,B7}.p2	AK054076|E230016M11Rik|320172|RIKEN cDNA E230016M11 gene
mm9_v1_chr19_+_10703592_10703743	0.046788	HOX{A6,A7,B6,B7}.p2	AK191685|Ddb1|13194|damage specific DNA binding protein 1	AK195557|Ddb1|13194|damage specific DNA binding protein 1	AK195744|Ddb1|13194|damage specific DNA binding protein 1	AK004284|Ddb1|13194|damage specific DNA binding protein 1
mm9_v1_chr2_+_38206759_38206827	0.0467543	HOX{A6,A7,B6,B7}.p2	AK053572|Lhx2|16870|LIM homeobox protein 2	NM_010710|Lhx2|16870|LIM homeobox protein 2
mm9_v1_chr18_+_37906668_37906697	0.0467257	HOX{A6,A7,B6,B7}.p2	BC035540|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr12_-_104895307_104895340	0.0465918	HOX{A6,A7,B6,B7}.p2	AK145842|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr3_+_89240625_89240684	0.0465724	HOX{A6,A7,B6,B7}.p2	NM_146131|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK028858|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159422|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159448|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK160103|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159633|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK028754|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	BC027771|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK170318|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	BC034200|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1
mm9_v1_chr2_+_156698083_156698153	0.0465575	HOX{A6,A7,B6,B7}.p2	AK184175|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK189929|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr5_-_149740171_149740208	0.0465239	HOX{A6,A7,B6,B7}.p2	BC030434|Katnal1|231912|katanin p60 subunit A-like 1
mm9_v1_chrX_+_97170927_97171053	0.046483	HOX{A6,A7,B6,B7}.p2	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr2_+_74695081_74695176	0.0464757	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_149363989_149364264	0.0463372	HOX{A6,A7,B6,B7}.p2	BC025595|Ubl3|24109|ubiquitin-like 3	AK145952|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr9_+_44287171_44287176	0.0462695	HOX{A6,A7,B6,B7}.p2	AK078316|C030014I23Rik|77381|RIKEN cDNA C030014I23 gene
mm9_v1_chr3_-_96398053_96398112	0.04622	HOX{A6,A7,B6,B7}.p2	BC027083|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like	AK008069|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like	AK168976|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like	NM_027241|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like
mm9_v1_chr7_-_34977928_34978057	0.0460641	HOX{A6,A7,B6,B7}.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr5_+_88254710_88254721	0.0460536	HOX{A6,A7,B6,B7}.p2	BC049645|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	BC103787|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	AK015291|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	NM_001163551|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	NM_028648|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene
mm9_v1_chr7_-_75893927_75894127	0.0460036	HOX{A6,A7,B6,B7}.p2	DQ861996|Arrdc4|66412|arrestin domain containing 4	BC017528|Arrdc4|66412|arrestin domain containing 4	AK010022|Arrdc4|66412|arrestin domain containing 4	AK037198|Arrdc4|66412|arrestin domain containing 4	NM_001042592|Arrdc4|66412|arrestin domain containing 4	NM_025549|Arrdc4|66412|arrestin domain containing 4	AK010352|Arrdc4|66412|arrestin domain containing 4
mm9_v1_chr7_+_135888383_135888523	0.0459357	HOX{A6,A7,B6,B7}.p2	NM_001029982|Sec23ip|207352|Sec23 interacting protein	AK048053|Sec23ip|207352|Sec23 interacting protein	BC098506|Sec23ip|207352|Sec23 interacting protein
mm9_v1_chr15_-_102993714_102993747	0.0459177	HOX{A6,A7,B6,B7}.p2	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr17_+_32421723_32421761	0.045706	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_58160966_58161035	0.0456966	HOX{A6,A7,B6,B7}.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr1_-_67085404_67085478	0.0456921	HOX{A6,A7,B6,B7}.p2	Y16518|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	BC058560|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	NM_001190984|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	Y11550|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AK146120|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AJ294535|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	NM_001190985|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	NM_021295|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1
mm9_v1_chr3_-_129534032_129534091	0.0456594	HOX{A6,A7,B6,B7}.p2	AK075923|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	AK167001|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	AK021256|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr3_-_95861723_95861742	0.0454175	HOX{A6,A7,B6,B7}.p2	BC012691|Vps45|22365|vacuolar protein sorting 45 (yeast)
mm9_v1_chr11_-_45768976_45768987	0.0453589	HOX{A6,A7,B6,B7}.p2	BC092541|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK017532|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr10_+_85061155_85061265	0.0451844	HOX{A6,A7,B6,B7}.p2	NM_001017525|Btbd11|74007|BTB (POZ) domain containing 11	AK044022|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr9_+_102910816_102910949	0.0450062	HOX{A6,A7,B6,B7}.p2	AK087350|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AK169706|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AK166724|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	NM_033314|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	BC035200|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AF323958|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1
mm9_v1_chr16_-_44114803_44114836	0.0449923	HOX{A6,A7,B6,B7}.p2	AK181657|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A
mm9_v1_chr15_-_77591830_77592015	0.0447973	HOX{A6,A7,B6,B7}.p2	M88754|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK087164|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC026521|Myh9|17886|myosin, heavy polypeptide 9, non-muscle
mm9_v1_chr11_+_60351159_60351225	0.0447723	HOX{A6,A7,B6,B7}.p2	NM_172943|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chr7_+_3596861_3596991	0.0445883	HOX{A6,A7,B6,B7}.p2	AK172439|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	NM_146176|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK141718|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK044755|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK031774|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC030332|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr5_-_101103051_101103304	0.0445486	HOX{A6,A7,B6,B7}.p2	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr9_-_107775011_107775029	0.0445165	HOX{A6,A7,B6,B7}.p2	AK220446|Rbm6|19654|RNA binding motif protein 6	AJ006486|Rbm6|19654|RNA binding motif protein 6	BC026130|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr8_-_108462291_108462291	0.0444395	HOX{A6,A7,B6,B7}.p2	NM_013640|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10
mm9_v1_chr11_-_95171521_95171560	0.044409	HOX{A6,A7,B6,B7}.p2	AK078483|Myst2|217127|MYST histone acetyltransferase 2	AK166915|Myst2|217127|MYST histone acetyltransferase 2	NM_001195003|Myst2|217127|MYST histone acetyltransferase 2	NM_001195004|Myst2|217127|MYST histone acetyltransferase 2	NM_177619|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr16_+_35155621_35155721	0.0444089	HOX{A6,A7,B6,B7}.p2	AK147590|Adcy5|224129|adenylate cyclase 5	AK160942|Adcy5|224129|adenylate cyclase 5	NM_001012765|Adcy5|224129|adenylate cyclase 5
mm9_v1_chr4_+_128670474_128670574	0.0444004	HOX{A6,A7,B6,B7}.p2	AK050133|Ak2|11637|adenylate kinase 2	AK167797|Ak2|11637|adenylate kinase 2	NM_001033966|Ak2|11637|adenylate kinase 2	AK168148|Ak2|11637|adenylate kinase 2	AB020202|Ak2|11637|adenylate kinase 2	AK168056|Ak2|11637|adenylate kinase 2	AK010936|Ak2|11637|adenylate kinase 2	AK010951|Ak2|11637|adenylate kinase 2	AK077519|Ak2|11637|adenylate kinase 2	BC008610|Ak2|11637|adenylate kinase 2	NM_016895|Ak2|11637|adenylate kinase 2	AK166976|Ak2|11637|adenylate kinase 2
mm9_v1_chr16_+_77013880_77014313	0.044392	HOX{A6,A7,B6,B7}.p2	AK011798|Usp25|30940|ubiquitin specific peptidase 25	AK036456|Usp25|30940|ubiquitin specific peptidase 25	AF170563|Usp25|30940|ubiquitin specific peptidase 25	BC048171|Usp25|30940|ubiquitin specific peptidase 25	BC063059|Usp25|30940|ubiquitin specific peptidase 25	NM_013918|Usp25|30940|ubiquitin specific peptidase 25
mm9_v1_chr19_-_4139516_4139608	0.0443191	HOX{A6,A7,B6,B7}.p2	BC029002|Cabp4|73660|calcium binding protein 4	BC053330|Cabp4|73660|calcium binding protein 4	AY039218|Cabp4|73660|calcium binding protein 4	BC049263|Cabp4|73660|calcium binding protein 4	NM_144532|Cabp4|73660|calcium binding protein 4
mm9_v1_chr17_-_32487506_32487542	0.04425	HOX{A6,A7,B6,B7}.p2	BC046801|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	AB028921|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	BC062877|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	BC051015|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	NM_017476|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	AK011325|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	AK166526|Akap8l|54194|A kinase (PRKA) anchor protein 8-like
mm9_v1_chr6_-_120314373_120314396	0.0441353	HOX{A6,A7,B6,B7}.p2	AK031590|Ccdc77|67200|coiled-coil domain containing 77
mm9_v1_chr10_-_59079420_59079437	0.0440858	HOX{A6,A7,B6,B7}.p2	AK166044|Ccdc109a|215999|coiled-coil domain containing 109A	AK083990|Ccdc109a|215999|coiled-coil domain containing 109A
mm9_v1_chr13_-_29947456_29947544	0.0439577	HOX{A6,A7,B6,B7}.p2	BC016073|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	NM_144536|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK158546|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK041864|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK018346|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK169761|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK082629|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK045506|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1
mm9_v1_chr12_+_86474651_86474814	0.0438037	HOX{A6,A7,B6,B7}.p2	AK218097|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK201762|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK202210|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK205589|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK206354|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK207941|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK209363|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK210896|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK219425|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK186759|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm9_v1_chr14_+_48740495_48740543	0.0437212	HOX{A6,A7,B6,B7}.p2	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
mm9_v1_chr12_+_77938392_77938461	0.0436747	HOX{A6,A7,B6,B7}.p2	AK008228|Fntb|110606|farnesyltransferase, CAAX box, beta	AK089911|Fntb|110606|farnesyltransferase, CAAX box, beta	BC031417|Fntb|110606|farnesyltransferase, CAAX box, beta	NM_145927|Fntb|110606|farnesyltransferase, CAAX box, beta
mm9_v1_chr1_-_65119965_65120107	0.043615	HOX{A6,A7,B6,B7}.p2	M64544|Crygc|12966|crystallin, gamma C	NM_007775|Crygc|12966|crystallin, gamma C	BC056454|Crygc|12966|crystallin, gamma C	EF426301|Crygc|12966|crystallin, gamma C	EF426302|Crygc|12966|crystallin, gamma C	NM_001082573|Crygc|12966|crystallin, gamma C
mm9_v1_chr5_-_31504605_31504675	0.0435425	HOX{A6,A7,B6,B7}.p2	BC058976|Zfp513|101023|zinc finger protein 513	NM_175311|Zfp513|101023|zinc finger protein 513
mm9_v1_chr5_-_144775583_144775788	0.0434815	HOX{A6,A7,B6,B7}.p2	AK213761|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC048077|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_177682|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK090008|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK171671|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK172392|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK146704|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK150793|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152328|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152576|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK153160|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK164888|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
mm9_v1_chr5_-_31829101_31829134	0.043411	HOX{A6,A7,B6,B7}.p2	AK047063|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like	AK144989|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like	NM_028150|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like
mm9_v1_chr18_+_37595274_37595294	0.0433932	HOX{A6,A7,B6,B7}.p2	NM_053137|Pcdhb12|93883|protocadherin beta 12
mm9_v1_chr16_-_38713106_38713149	0.0432991	HOX{A6,A7,B6,B7}.p2	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr7_+_16633755_16633793	0.0432987	HOX{A6,A7,B6,B7}.p2	AK008102|2010004M13Rik|76511|RIKEN cDNA 2010004M13 gene
mm9_v1_chr11_-_106576380_106576409	0.0432321	HOX{A6,A7,B6,B7}.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr8_+_109867910_109868036	0.0431064	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_17978221_17978239	0.0430436	HOX{A6,A7,B6,B7}.p2	AK007903|1810059C17Rik|69818|RIKEN cDNA 1810059C17 gene
mm9_v1_chr5_-_24083185_24083284	0.0430206	HOX{A6,A7,B6,B7}.p2	AK087990|Abcf2|27407|ATP-binding cassette, sub-family F (GCN20), member 2	AK137233|Abcf2|27407|ATP-binding cassette, sub-family F (GCN20), member 2	AK147937|Abcf2|27407|ATP-binding cassette, sub-family F (GCN20), member 2	AK151545|Abcf2|27407|ATP-binding cassette, sub-family F (GCN20), member 2	NM_001190443|Abcf2|27407|ATP-binding cassette, sub-family F (GCN20), member 2	NM_013853|Abcf2|27407|ATP-binding cassette, sub-family F (GCN20), member 2
mm9_v1_chr11_-_69509498_69509599	0.042992	HOX{A6,A7,B6,B7}.p2	AK170297|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK171014|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK044387|BC096441|619441|cDNA sequence BC096441	NM_001034097|BC096441|619441|cDNA sequence BC096441	NM_001159503|BC096441|619441|cDNA sequence BC096441	NM_011614|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr6_-_148719426_148719561	0.042954	HOX{A6,A7,B6,B7}.p2	X67534|Ipo8|320727|importin 8
mm9_v1_chr3_+_94736974_94736989	0.0429487	HOX{A6,A7,B6,B7}.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr11_-_65981945_65982052	0.0429465	HOX{A6,A7,B6,B7}.p2	AK082443|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK030981|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK044263|Dnahc9|237806|dynein, axonemal, heavy chain 9	NM_001099633|Dnahc9|237806|dynein, axonemal, heavy chain 9
mm9_v1_chr11_-_3245718_3245858	0.0428137	HOX{A6,A7,B6,B7}.p2	AK038530|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr1_+_42908239_42908242	0.0428076	HOX{A6,A7,B6,B7}.p2	AK214977|Mrps9|69527|mitochondrial ribosomal protein S9
mm9_v1_chr8_-_113365126_113365129	0.0427748	HOX{A6,A7,B6,B7}.p2	AK214493|Sf3b3|101943|splicing factor 3b, subunit 3	AK209569|Sf3b3|101943|splicing factor 3b, subunit 3
mm9_v1_chr3_+_95965959_95965978	0.0426941	HOX{A6,A7,B6,B7}.p2	BC051083|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr7_+_91040751_91040937	0.0426387	HOX{A6,A7,B6,B7}.p2	AK031949|Mesdc2|67943|mesoderm development candidate 2	AK076760|Mesdc2|67943|mesoderm development candidate 2	AK172009|Mesdc2|67943|mesoderm development candidate 2	AK076773|Mesdc2|67943|mesoderm development candidate 2	AK008735|Mesdc2|67943|mesoderm development candidate 2	BC014742|Mesdc2|67943|mesoderm development candidate 2	AK204742|Mesdc2|67943|mesoderm development candidate 2
mm9_v1_chr4_-_4065927_4065977	0.042506	HOX{A6,A7,B6,B7}.p2	AK047709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK161272|Penk|18619|preproenkephalin	AK135111|Penk|18619|preproenkephalin
mm9_v1_chrX_+_148451021_148451054	0.0424855	HOX{A6,A7,B6,B7}.p2	AK017948|Smc1a|24061|structural maintenance of chromosomes 1A	BC036973|Smc1a|24061|structural maintenance of chromosomes 1A	BC003279|Smc1a|24061|structural maintenance of chromosomes 1A	AK088183|Smc1a|24061|structural maintenance of chromosomes 1A	AK145255|Smc1a|24061|structural maintenance of chromosomes 1A	BC025590|Smc1a|24061|structural maintenance of chromosomes 1A
mm9_v1_chr14_-_73109254_73109390	0.0424792	HOX{A6,A7,B6,B7}.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr4_+_108252056_108252143	0.0424329	HOX{A6,A7,B6,B7}.p2	AK141741|Orc1|18392|origin recognition complex, subunit 1	AK161814|Orc1|18392|origin recognition complex, subunit 1	AK164035|Orc1|18392|origin recognition complex, subunit 1	NM_011015|Orc1|18392|origin recognition complex, subunit 1	AK145260|Orc1|18392|origin recognition complex, subunit 1	AK042130|Orc1|18392|origin recognition complex, subunit 1	BC038007|Orc1|18392|origin recognition complex, subunit 1	AJ003133|Orc1|18392|origin recognition complex, subunit 1	BC015073|Orc1|18392|origin recognition complex, subunit 1
mm9_v1_chr6_-_13557981_13558062	0.0423807	HOX{A6,A7,B6,B7}.p2	BC024911|Tmem168|101118|transmembrane protein 168	BC007160|Tmem168|101118|transmembrane protein 168	AK054353|Tmem168|101118|transmembrane protein 168	AK152957|Tmem168|101118|transmembrane protein 168	AK034589|Tmem168|101118|transmembrane protein 168	AK170302|Tmem168|101118|transmembrane protein 168	AK018471|Tmem168|101118|transmembrane protein 168	AK051532|Tmem168|101118|transmembrane protein 168	NM_028990|Tmem168|101118|transmembrane protein 168
mm9_v1_chr4_+_132686585_132686596	0.0423221	HOX{A6,A7,B6,B7}.p2	AK183500|Wasf2|242687|WAS protein family, member 2
mm9_v1_chr16_+_20128178_20128320	0.0422815	HOX{A6,A7,B6,B7}.p2	AK004187|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr5_+_37633178_37633304	0.0421981	HOX{A6,A7,B6,B7}.p2	AF501323|Crmp1|12933|collapsin response mediator protein 1
mm9_v1_chr19_+_46576137_46576194	0.0420949	HOX{A6,A7,B6,B7}.p2	NM_053100|Trim8|93679|tripartite motif-containing 8	AK155303|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr5_+_122734363_122734418	0.042086	HOX{A6,A7,B6,B7}.p2	AK135118|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK083481|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK078914|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	BC068149|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_177242|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)
mm9_v1_chr10_-_30562434_30562625	0.0420702	HOX{A6,A7,B6,B7}.p2	AK031506|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AB093589|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103575|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105651|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103576|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105652|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF173902|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF232240|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AK158000|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF172287|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AJ271867|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	NM_013904|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2
mm9_v1_chr10_-_90616085_90616118	0.041928	HOX{A6,A7,B6,B7}.p2	AK186132|Tmpo|21917|thymopoietin	AK199505|Tmpo|21917|thymopoietin
mm9_v1_chr16_-_94747998_94748038	0.0418461	HOX{A6,A7,B6,B7}.p2	BC003740|Dscr3|13185|Down syndrome critical region gene 3	AK188213|Dscr3|13185|Down syndrome critical region gene 3
mm9_v1_chr3_+_94176747_94176784	0.0418308	HOX{A6,A7,B6,B7}.p2	NM_011281|Rorc|19885|RAR-related orphan receptor gamma	AK160122|Rorc|19885|RAR-related orphan receptor gamma	BC014804|Rorc|19885|RAR-related orphan receptor gamma	U43508|Rorc|19885|RAR-related orphan receptor gamma
mm9_v1_chr11_+_87861165_87861225	0.0418102	HOX{A6,A7,B6,B7}.p2	AK150535|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_001078167|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_173374|Srsf1|110809|serine/arginine-rich splicing factor 1	AK053674|Srsf1|110809|serine/arginine-rich splicing factor 1	AK018176|Srsf1|110809|serine/arginine-rich splicing factor 1	BC058627|Srsf1|110809|serine/arginine-rich splicing factor 1	AK078715|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169203|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169623|Srsf1|110809|serine/arginine-rich splicing factor 1	AK190745|Srsf1|110809|serine/arginine-rich splicing factor 1
mm9_v1_chr15_+_12754561_12754569	0.0417996	HOX{A6,A7,B6,B7}.p2	NM_001130149|Drosha|14000|drosha, ribonuclease type III	NM_026799|Drosha|14000|drosha, ribonuclease type III
mm9_v1_chr5_-_28793186_28793356	0.0417938	HOX{A6,A7,B6,B7}.p2	EU664592|Shh|20423|sonic hedgehog	X76290|Shh|20423|sonic hedgehog
mm9_v1_chr4_-_33037783_33037814	0.0417737	HOX{A6,A7,B6,B7}.p2	AK135024|Ankrd6|140577|ankyrin repeat domain 6	NM_001012451|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr17_+_80689536_80689571	0.0416522	HOX{A6,A7,B6,B7}.p2	AY367765|Morn2|378462|MORN repeat containing 2	NM_194269|Morn2|378462|MORN repeat containing 2	BC037365|Morn2|378462|MORN repeat containing 2
mm9_v1_chr15_-_8394462_8394663	0.0415818	HOX{A6,A7,B6,B7}.p2	AJ627033|Nipbl|71175|Nipped-B homolog (Drosophila)	AJ640138|Nipbl|71175|Nipped-B homolog (Drosophila)	NM_027707|Nipbl|71175|Nipped-B homolog (Drosophila)	NM_201232|Nipbl|71175|Nipped-B homolog (Drosophila)
mm9_v1_chr11_-_106077657_106077682	0.0414183	HOX{A6,A7,B6,B7}.p2	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr11_+_98547296_98547343	0.0413491	HOX{A6,A7,B6,B7}.p2	AK180273|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr6_+_86354212_86354404	0.0413235	HOX{A6,A7,B6,B7}.p2	NM_001164078|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_001164079|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_011585|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK144222|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK088486|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC023813|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC046812|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC027826|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	U55862|Tia1|21841|cytotoxic granule-associated RNA binding protein 1
mm9_v1_chr6_-_5248335_5248416	0.0412626	HOX{A6,A7,B6,B7}.p2	AK146311|Pon2|330260|paraoxonase 2	AK007350|Pon2|330260|paraoxonase 2	BC062200|Pon2|330260|paraoxonase 2	BC055896|Pon2|330260|paraoxonase 2	NM_183308|Pon2|330260|paraoxonase 2
mm9_v1_chr13_+_23830944_23831229	0.0412597	HOX{A6,A7,B6,B7}.p2	AK135614|Hist1h1c|50708|histone cluster 1, H1c	AK209931|Hist1h1c|50708|histone cluster 1, H1c	AK211271|Hist1h1c|50708|histone cluster 1, H1c	AK210230|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr3_+_87847020_87847078	0.041153	HOX{A6,A7,B6,B7}.p2	AK011617|Gpatch4|66614|G patch domain containing 4	NM_001110809|Gpatch4|66614|G patch domain containing 4	NM_025663|Gpatch4|66614|G patch domain containing 4	AK078828|Gpatch4|66614|G patch domain containing 4	AK169111|Gpatch4|66614|G patch domain containing 4	BC019490|Gpatch4|66614|G patch domain containing 4	BC080676|Gpatch4|66614|G patch domain containing 4	AK018306|Gpatch4|66614|G patch domain containing 4	BC002265|Gpatch4|66614|G patch domain containing 4	AK017310|Gpatch4|66614|G patch domain containing 4
mm9_v1_chr2_-_87990239_87990239	0.0410836	HOX{A6,A7,B6,B7}.p2	BC119292|Olfr1167|258291|olfactory receptor 1167	BC137817|Olfr1167|258291|olfactory receptor 1167	NM_146294|Olfr1167|258291|olfactory receptor 1167
mm9_v1_chr8_+_73890746_73890840	0.0410459	HOX{A6,A7,B6,B7}.p2	NM_001145780|Use1|67023|unconventional SNARE in the ER 1 homolog (S. cerevisiae)	BC075695|Use1|67023|unconventional SNARE in the ER 1 homolog (S. cerevisiae)
mm9_v1_chr6_-_87716204_87716225	0.0409248	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_134714418_134714419	0.0409039	HOX{A6,A7,B6,B7}.p2	AK198068|Gtf2i|14886|general transcription factor II I
mm9_v1_chr12_+_90191833_90191842	0.0408885	HOX{A6,A7,B6,B7}.p2	NM_172544|Nrxn3|18191|neurexin III	AK032126|Nrxn3|18191|neurexin III
mm9_v1_chr10_-_80841099_80841253	0.0408367	HOX{A6,A7,B6,B7}.p2	AF083809|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	NM_019757|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK081476|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK163951|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK083686|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK155370|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK051993|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	BC006616|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK154822|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK172679|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)
mm9_v1_chr11_-_51670897_51671154	0.040834	HOX{A6,A7,B6,B7}.p2	AK147453|Phf15|76901|PHD finger protein 15	AK129097|Phf15|76901|PHD finger protein 15	NM_199299|Phf15|76901|PHD finger protein 15	AK004823|Phf15|76901|PHD finger protein 15
mm9_v1_chr2_+_174109820_174109853	0.040728	HOX{A6,A7,B6,B7}.p2	AK039035|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_019690|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_022000|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF107848|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK161197|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF175305|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AJ010163|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr3_+_88390817_88390831	0.0406754	HOX{A6,A7,B6,B7}.p2	AK217251|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chrX_-_99839480_99839617	0.0406532	HOX{A6,A7,B6,B7}.p2	X74616|Phka1|18679|phosphorylase kinase alpha 1	AK137497|Phka1|18679|phosphorylase kinase alpha 1	AK036440|Phka1|18679|phosphorylase kinase alpha 1	AK030426|Phka1|18679|phosphorylase kinase alpha 1	NM_008832|Phka1|18679|phosphorylase kinase alpha 1	NM_173021|Phka1|18679|phosphorylase kinase alpha 1
mm9_v1_chr4_-_108506131_108506262	0.0405306	HOX{A6,A7,B6,B7}.p2	BC024920|Btf3l4|70533|basic transcription factor 3-like 4	BC058282|Btf3l4|70533|basic transcription factor 3-like 4	AK011367|Btf3l4|70533|basic transcription factor 3-like 4	AK167256|Btf3l4|70533|basic transcription factor 3-like 4	BC138215|Btf3l4|70533|basic transcription factor 3-like 4	BC138216|Btf3l4|70533|basic transcription factor 3-like 4	BC024612|Btf3l4|70533|basic transcription factor 3-like 4	AK013120|Btf3l4|70533|basic transcription factor 3-like 4	AK076283|Btf3l4|70533|basic transcription factor 3-like 4	NM_027453|Btf3l4|70533|basic transcription factor 3-like 4	AK004239|Btf3l4|70533|basic transcription factor 3-like 4
mm9_v1_chr8_+_124474475_124474479	0.0405266	HOX{A6,A7,B6,B7}.p2	AK170884|Banp|53325|BTG3 associated nuclear protein	AF091234|Banp|53325|BTG3 associated nuclear protein	AF235503|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr12_+_39506844_39506916	0.0404225	HOX{A6,A7,B6,B7}.p2	NM_007960|Etv1|14009|ets variant gene 1	L10426|Etv1|14009|ets variant gene 1	AK144713|Etv1|14009|ets variant gene 1	BC005645|Etv1|14009|ets variant gene 1
mm9_v1_chr18_-_61008391_61008636	0.040384	HOX{A6,A7,B6,B7}.p2	U81030|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AF001794|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC057342|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC060105|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC046608|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC052669|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AK089518|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC021514|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_001198984|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_011552|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog
mm9_v1_chr11_+_78085325_78085440	0.0402293	HOX{A6,A7,B6,B7}.p2	BC040464|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr15_+_31154137_31154175	0.0402052	HOX{A6,A7,B6,B7}.p2	NM_146057|Dap|223453|death-associated protein	AK171259|Dap|223453|death-associated protein	AK152884|Dap|223453|death-associated protein
mm9_v1_chr13_-_54694915_54694970	0.0401756	HOX{A6,A7,B6,B7}.p2	AK213322|Cltb|74325|clathrin, light polypeptide (Lcb)
mm9_v1_chr10_+_110929965_110929972	0.0401586	HOX{A6,A7,B6,B7}.p2	AK216281|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr16_-_38525341_38525620	0.0400852	HOX{A6,A7,B6,B7}.p2	AK076379|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr9_+_106366204_106366267	0.0400847	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_97258202_97258205	0.0400761	HOX{A6,A7,B6,B7}.p2	AK138734|Socs7|192157|suppressor of cytokine signaling 7
mm9_v1_chr18_+_30432499_30432592	0.0400046	HOX{A6,A7,B6,B7}.p2	AK030578|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC024675|Pik3c3|225326|phosphoinositide-3-kinase, class 3	NM_181414|Pik3c3|225326|phosphoinositide-3-kinase, class 3	AK044997|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC057678|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC027029|Pik3c3|225326|phosphoinositide-3-kinase, class 3
mm9_v1_chr6_+_8898613_8898694	0.0398383	HOX{A6,A7,B6,B7}.p2	AK083014|Nxph1|18231|neurexophilin 1
mm9_v1_chr11_-_70501586_70501625	0.0397158	HOX{A6,A7,B6,B7}.p2	NM_001190376|Camta2|216874|calmodulin binding transcription activator 2	NM_001190378|Camta2|216874|calmodulin binding transcription activator 2	NM_001190379|Camta2|216874|calmodulin binding transcription activator 2	NM_178116|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr17_-_45706642_45706682	0.0395955	HOX{A6,A7,B6,B7}.p2	BC049951|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC044888|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr11_-_74148730_74148730	0.0394856	HOX{A6,A7,B6,B7}.p2	NM_146707|Olfr410|258702|olfactory receptor 410
mm9_v1_chr2_+_26775279_26775409	0.039466	HOX{A6,A7,B6,B7}.p2	AK215042|Surf2|20931|surfeit gene 2
mm9_v1_chr11_-_113927264_113927288	0.0394091	HOX{A6,A7,B6,B7}.p2	AY351699|Sdk2|237979|sidekick homolog 2 (chicken)	NM_172800|Sdk2|237979|sidekick homolog 2 (chicken)	AK052040|Sdk2|237979|sidekick homolog 2 (chicken)
mm9_v1_chr19_+_17468498_17468584	0.0393578	HOX{A6,A7,B6,B7}.p2	NM_019437|Rfk|54391|riboflavin kinase	AK002806|Rfk|54391|riboflavin kinase
mm9_v1_chrX_-_130432840_130432967	0.0391961	HOX{A6,A7,B6,B7}.p2	AK160313|Tspan6|56496|tetraspanin 6	AK167384|Tspan6|56496|tetraspanin 6	AK146673|Tspan6|56496|tetraspanin 6	AK149204|Tspan6|56496|tetraspanin 6	BC110314|Tspan6|56496|tetraspanin 6	BC003733|Tspan6|56496|tetraspanin 6	NM_019656|Tspan6|56496|tetraspanin 6
mm9_v1_chr2_-_131970786_131970867	0.0391392	HOX{A6,A7,B6,B7}.p2	AY004874|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK087175|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK169991|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	NM_018824|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2
mm9_v1_chr2_-_9981155_9981246	0.0391283	HOX{A6,A7,B6,B7}.p2	AK187037|Atp5c1|11949|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
mm9_v1_chr2_+_91297662_91297668	0.039085	HOX{A6,A7,B6,B7}.p2	AK032360|Lrp4|228357|low density lipoprotein receptor-related protein 4
mm9_v1_chr6_+_134879160_134879183	0.0389354	HOX{A6,A7,B6,B7}.p2	AK012387|1190002F15Rik|381822|RIKEN cDNA 1190002F15 gene
mm9_v1_chr6_+_134961654_134961711	0.0389074	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_4720309_4720398	0.0387855	HOX{A6,A7,B6,B7}.p2	BC138209|Impad1|242291|inositol monophosphatase domain containing 1	BC145952|Impad1|242291|inositol monophosphatase domain containing 1
mm9_v1_chr13_-_55463928_55463990	0.0387101	HOX{A6,A7,B6,B7}.p2	AK014384|Lman2|66890|lectin, mannose-binding 2	BC049221|Lman2|66890|lectin, mannose-binding 2	AK129028|Lman2|66890|lectin, mannose-binding 2	AK169401|Lman2|66890|lectin, mannose-binding 2	AK004952|Lman2|66890|lectin, mannose-binding 2	AK028452|Lman2|66890|lectin, mannose-binding 2	AK150383|Lman2|66890|lectin, mannose-binding 2	AK083442|Lman2|66890|lectin, mannose-binding 2	AK166953|Lman2|66890|lectin, mannose-binding 2
mm9_v1_chr11_-_53520771_53520798	0.0386862	HOX{A6,A7,B6,B7}.p2	BC058180|Rad50|19360|RAD50 homolog (S. cerevisiae)	U66887|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr8_-_26311823_26311983	0.0385872	HOX{A6,A7,B6,B7}.p2	BC125389|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	BC145709|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	AK037910|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	AK138513|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	AK046384|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	AY177412|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	AY177413|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	NM_177089|Tacc1|320165|transforming, acidic coiled-coil containing protein 1	NM_199323|Tacc1|320165|transforming, acidic coiled-coil containing protein 1
mm9_v1_chr18_-_61867246_61867319	0.0385189	HOX{A6,A7,B6,B7}.p2	BC060677|Pcyox1l|240334|prenylcysteine oxidase 1 like	AK050006|Pcyox1l|240334|prenylcysteine oxidase 1 like	NM_172832|Pcyox1l|240334|prenylcysteine oxidase 1 like
mm9_v1_chr8_+_125748717_125748786	0.038371	HOX{A6,A7,B6,B7}.p2	NM_194444|Cdk10|234854|cyclin-dependent kinase 10	NM_194446|Cdk10|234854|cyclin-dependent kinase 10	DQ288857|Cdk10|234854|cyclin-dependent kinase 10	BC017131|Cdk10|234854|cyclin-dependent kinase 10	AK144801|Cdk10|234854|cyclin-dependent kinase 10	AK170594|Cdk10|234854|cyclin-dependent kinase 10	BC052096|Cdk10|234854|cyclin-dependent kinase 10	BC023736|Cdk10|234854|cyclin-dependent kinase 10	AK133918|Cdk10|234854|cyclin-dependent kinase 10
mm9_v1_chr3_+_87946259_87946350	0.0383574	HOX{A6,A7,B6,B7}.p2	AK155778|Mef2d|17261|myocyte enhancer factor 2D	NM_133665|Mef2d|17261|myocyte enhancer factor 2D	AK141270|Mef2d|17261|myocyte enhancer factor 2D	BC011070|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr19_+_44368165_44368165	0.038304	HOX{A6,A7,B6,B7}.p2	AK147406|Scd2|20250|stearoyl-Coenzyme A desaturase 2	NM_009128|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr5_+_118619772_118619918	0.0382505	HOX{A6,A7,B6,B7}.p2	BC128022|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)	D83698|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)	NM_007545|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm9_v1_chr1_-_88255804_88255941	0.0382473	HOX{A6,A7,B6,B7}.p2	AK181817|Ncl|17975|nucleolin	AK215976|Ncl|17975|nucleolin	BC005460|Ncl|17975|nucleolin	BC012657|Ncl|17975|nucleolin	BC014285|Ncl|17975|nucleolin	AK168579|Ncl|17975|nucleolin	AK163275|Ncl|17975|nucleolin	AK011201|Ncl|17975|nucleolin	AK028681|Ncl|17975|nucleolin	AK029128|Ncl|17975|nucleolin	AK088402|Ncl|17975|nucleolin	AK144894|Ncl|17975|nucleolin	AK161597|Ncl|17975|nucleolin	AK165167|Ncl|17975|nucleolin	AK166681|Ncl|17975|nucleolin	AK168623|Ncl|17975|nucleolin	AF318184|Ncl|17975|nucleolin
mm9_v1_chr6_+_129491258_129491317	0.0381861	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_186823350_186823427	0.0380475	HOX{A6,A7,B6,B7}.p2	AB185282|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	BC112400|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	AF453686|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	NM_145515|Mark1|226778|MAP/microtubule affinity-regulating kinase 1
mm9_v1_chr7_-_53965879_53966065	0.0379703	HOX{A6,A7,B6,B7}.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr5_+_121654495_121654559	0.0379429	HOX{A6,A7,B6,B7}.p2	AK153208|Rpl6|19988|ribosomal protein L6	NM_011290|Rpl6|19988|ribosomal protein L6	AK150540|Rpl6|19988|ribosomal protein L6	AK151344|Rpl6|19988|ribosomal protein L6	AK151759|Rpl6|19988|ribosomal protein L6	AK151022|Rpl6|19988|ribosomal protein L6	AK153507|Rpl6|19988|ribosomal protein L6	AK167439|Rpl6|19988|ribosomal protein L6	AK135175|Rpl6|19988|ribosomal protein L6	AK148479|Rpl6|19988|ribosomal protein L6	AK002248|Rpl6|19988|ribosomal protein L6	AK002648|Rpl6|19988|ribosomal protein L6
mm9_v1_chr7_+_90015842_90015842	0.0378276	HOX{A6,A7,B6,B7}.p2	NM_175366|Mex3b|108797|mex3 homolog B (C. elegans)
mm9_v1_chr7_+_88005861_88005865	0.0378071	HOX{A6,A7,B6,B7}.p2	AK147779|Zscan2|22691|zinc finger and SCAN domain containing 2
mm9_v1_chr12_+_111976198_111976210	0.0377931	HOX{A6,A7,B6,B7}.p2	AK136417|Wdr20a|69641|WD repeat domain 20A	BC064773|Wdr20a|69641|WD repeat domain 20A
mm9_v1_chr17_-_57387033_57387124	0.0377556	HOX{A6,A7,B6,B7}.p2	AK047364|Gpr108|78308|G protein-coupled receptor 108	AF376726|Gpr108|78308|G protein-coupled receptor 108	AX775897|Gpr108|78308|G protein-coupled receptor 108	AK082797|Gpr108|78308|G protein-coupled receptor 108	BC016104|Gpr108|78308|G protein-coupled receptor 108	NM_030084|Gpr108|78308|G protein-coupled receptor 108	AK159313|Gpr108|78308|G protein-coupled receptor 108	AK170948|Gpr108|78308|G protein-coupled receptor 108	AK171030|Gpr108|78308|G protein-coupled receptor 108	AX775895|Gpr108|78308|G protein-coupled receptor 108
mm9_v1_chr9_+_21479519_21479574	0.0376642	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_100958952_100958993	0.0376592	HOX{A6,A7,B6,B7}.p2	L48015|Acvrl1|11482|activin A receptor, type II-like 1	NM_009612|Acvrl1|11482|activin A receptor, type II-like 1	AK160915|Acvrl1|11482|activin A receptor, type II-like 1
mm9_v1_chr1_+_182260606_182260741	0.0376116	HOX{A6,A7,B6,B7}.p2	NM_001081175|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	AK046612|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	AK053759|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	BC151160|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	BC157986|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	BC158000|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B
mm9_v1_chr18_+_32227377_32227461	0.0375975	HOX{A6,A7,B6,B7}.p2	NM_173441|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK033013|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK041691|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK028247|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK163972|Iws1|73473|IWS1 homolog (S. cerevisiae)	BC068184|Iws1|73473|IWS1 homolog (S. cerevisiae)
mm9_v1_chr11_-_69373555_69373681	0.0375689	HOX{A6,A7,B6,B7}.p2	BC052001|Efnb3|13643|ephrin B3	BC058617|Efnb3|13643|ephrin B3	AK048305|Efnb3|13643|ephrin B3
mm9_v1_chr2_-_155937623_155937702	0.0374397	HOX{A6,A7,B6,B7}.p2	AK220288|Cpne1|266692|copine I	BC052473|Rbm12|75710|RNA binding motif protein 12	BC057554|Cpne1|266692|copine I	AK035014|Rbm12|75710|RNA binding motif protein 12	AK080772|Rbm12|75710|RNA binding motif protein 12	AF393215|Rbm12|75710|RNA binding motif protein 12	AF393216|Rbm12|75710|RNA binding motif protein 12	AK028882|Cpne1|266692|copine I	AK152323|Cpne1|266692|copine I	NM_029397|Rbm12|75710|RNA binding motif protein 12	NM_170588|Cpne1|266692|copine I	NM_170590|Cpne1|266692|copine I	NM_170598|Rbm12|75710|RNA binding motif protein 12
mm9_v1_chr10_-_117261663_117261731	0.0374235	HOX{A6,A7,B6,B7}.p2	M79314|Rap1b|215449|RAS related protein 1b	BC147700|Rap1b|215449|RAS related protein 1b	BC147713|Rap1b|215449|RAS related protein 1b
mm9_v1_chr11_-_68666432_68666614	0.0374074	HOX{A6,A7,B6,B7}.p2	AK011168|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	AF290472|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	AK146029|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	BC046796|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr10_-_25798022_25798082	0.0373723	HOX{A6,A7,B6,B7}.p2	AK165025|Tmem200a|77220|transmembrane protein 200A	BC141266|Tmem200a|77220|transmembrane protein 200A	BC141267|Tmem200a|77220|transmembrane protein 200A
mm9_v1_chr12_-_41172348_41172381	0.0373587	HOX{A6,A7,B6,B7}.p2	AK156529|Zfp277|246196|zinc finger protein 277	BC043453|Zfp277|246196|zinc finger protein 277	AK077401|Zfp277|246196|zinc finger protein 277	AK075945|Zfp277|246196|zinc finger protein 277	AK145060|Zfp277|246196|zinc finger protein 277	NM_172575|Zfp277|246196|zinc finger protein 277	NM_178845|Zfp277|246196|zinc finger protein 277
mm9_v1_chr18_+_50115628_50115725	0.0369307	HOX{A6,A7,B6,B7}.p2	AK046910|Dmxl1|240283|Dmx-like 1
mm9_v1_chr2_-_156218547_156218745	0.036909	HOX{A6,A7,B6,B7}.p2	AK013851|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene	AK136079|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene	AK077867|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene
mm9_v1_chr12_+_81891479_81891592	0.0368916	HOX{A6,A7,B6,B7}.p2	AK030233|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK161132|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK143867|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	BC040401|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	NM_178682|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK151939|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK152820|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK164823|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr18_+_65352751_65352821	0.0368897	HOX{A6,A7,B6,B7}.p2	AK213593|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like	AK215536|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr18_+_58996320_58996417	0.036883	HOX{A6,A7,B6,B7}.p2	BC150736|Adamts19|240322|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19	AY135183|Adamts19|240322|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19	NM_175506|Adamts19|240322|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
mm9_v1_chr6_+_129483215_129483234	0.0367763	HOX{A6,A7,B6,B7}.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr8_-_85856284_85856386	0.036682	HOX{A6,A7,B6,B7}.p2	AK041137|Elmod2|244548|ELMO domain containing 2	AK165222|Elmod2|244548|ELMO domain containing 2	AK036746|Elmod2|244548|ELMO domain containing 2	BC079654|Elmod2|244548|ELMO domain containing 2	AK029044|Elmod2|244548|ELMO domain containing 2	AK036607|Elmod2|244548|ELMO domain containing 2	AK084950|Elmod2|244548|ELMO domain containing 2	NM_001170691|Elmod2|244548|ELMO domain containing 2	NM_178736|Elmod2|244548|ELMO domain containing 2
mm9_v1_chr17_-_85463965_85464074	0.0366725	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_114214654_114214807	0.036577	HOX{A6,A7,B6,B7}.p2	NM_001145900|Btbd6|399566|BTB (POZ) domain containing 6	BC031195|Btbd6|399566|BTB (POZ) domain containing 6	NM_201646|Btbd6|399566|BTB (POZ) domain containing 6
mm9_v1_chrX_-_71330931_71331012	0.0365472	HOX{A6,A7,B6,B7}.p2	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr1_-_82232392_82232507	0.0365368	HOX{A6,A7,B6,B7}.p2	AK141842|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr11_+_70027581_70027626	0.0363838	HOX{A6,A7,B6,B7}.p2	AB041591|Slc16a11|216867|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm9_v1_chr7_+_129210954_129210978	0.0363553	HOX{A6,A7,B6,B7}.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr5_+_52581905_52581999	0.0363387	HOX{A6,A7,B6,B7}.p2	AK163067|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene	AK136375|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene	AK079034|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene	AK050940|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene
mm9_v1_chr7_-_86275845_86275903	0.0363243	HOX{A6,A7,B6,B7}.p2	AY269788|Hapln3|67666|hyaluronan and proteoglycan link protein 3	BC110474|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AK017865|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AK136956|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AK016123|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AY262757|Hapln3|67666|hyaluronan and proteoglycan link protein 3	NM_178255|Hapln3|67666|hyaluronan and proteoglycan link protein 3
mm9_v1_chr3_-_130951398_130951434	0.0363102	HOX{A6,A7,B6,B7}.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr2_-_87475901_87475901	0.0362866	HOX{A6,A7,B6,B7}.p2	NM_146836|Olfr1132|258833|olfactory receptor 1132
mm9_v1_chr1_-_137327006_137327084	0.0362488	HOX{A6,A7,B6,B7}.p2	AJ309238|Ipo9|226432|importin 9	AF273672|Ipo9|226432|importin 9	AF273673|Ipo9|226432|importin 9	AK036687|Ipo9|226432|importin 9	BC098508|Ipo9|226432|importin 9	BC056469|Ipo9|226432|importin 9	BC079546|Ipo9|226432|importin 9	NM_153774|Ipo9|226432|importin 9
mm9_v1_chr4_-_70071302_70071482	0.036158	HOX{A6,A7,B6,B7}.p2	BC086696|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK013550|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK129411|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	NM_145990|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	BC079888|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2
mm9_v1_chr4_-_132895228_132895231	0.0361329	HOX{A6,A7,B6,B7}.p2	AK172431|Wdtc1|230796|WD and tetratricopeptide repeats 1	NM_199306|Wdtc1|230796|WD and tetratricopeptide repeats 1
mm9_v1_chr17_-_27640248_27640248	0.0360991	HOX{A6,A7,B6,B7}.p2	BC080284|Grm4|268934|glutamate receptor, metabotropic 4	NM_001013385|Grm4|268934|glutamate receptor, metabotropic 4
mm9_v1_chr5_-_116738971_116738993	0.0360957	HOX{A6,A7,B6,B7}.p2	BC075662|Ccdc60|269693|coiled-coil domain containing 60	AK082047|Ccdc60|269693|coiled-coil domain containing 60	NM_177759|Ccdc60|269693|coiled-coil domain containing 60
mm9_v1_chr1_-_36756687_36756877	0.0360926	HOX{A6,A7,B6,B7}.p2	AK010077|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
mm9_v1_chr14_+_75721556_75721651	0.0360881	HOX{A6,A7,B6,B7}.p2	BC094575|Zc3h13|67302|zinc finger CCCH type containing 13
mm9_v1_chr10_+_25949512_25949512	0.0359761	HOX{A6,A7,B6,B7}.p2	AK082201|Samd3|268288|sterile alpha motif domain containing 3	BC150876|Samd3|268288|sterile alpha motif domain containing 3	NM_001013766|Samd3|268288|sterile alpha motif domain containing 3	NM_001115154|Samd3|268288|sterile alpha motif domain containing 3
mm9_v1_chr4_+_115457560_115457648	0.0358844	HOX{A6,A7,B6,B7}.p2	BC044874|Atpaf1|230649|ATP synthase mitochondrial F1 complex assembly factor 1	NM_181040|Atpaf1|230649|ATP synthase mitochondrial F1 complex assembly factor 1
mm9_v1_chr15_-_81877947_81878027	0.0358657	HOX{A6,A7,B6,B7}.p2	BC083315|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK134943|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC026755|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC054450|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK004489|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK168930|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	U95114|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK168808|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK145608|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK169103|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK145391|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_011482|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
mm9_v1_chrX_-_45944937_45944938	0.0358489	HOX{A6,A7,B6,B7}.p2	BC051397|Zfp280c|208968|zinc finger protein 280C	NM_001166650|Zfp280c|208968|zinc finger protein 280C	BC028839|Zfp280c|208968|zinc finger protein 280C
mm9_v1_chr5_-_122822329_122822391	0.035803	HOX{A6,A7,B6,B7}.p2	BC019498|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK005211|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK150218|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr11_+_114588725_114588725	0.0356973	HOX{A6,A7,B6,B7}.p2	NM_001034878|Dnaic2|432611|dynein, axonemal, intermediate chain 2
mm9_v1_chr4_-_94718846_94718914	0.035643	HOX{A6,A7,B6,B7}.p2	BC021888|Jun|16476|Jun oncogene	BC094032|Jun|16476|Jun oncogene	J04115|Jun|16476|Jun oncogene	AK132019|Jun|16476|Jun oncogene	AK140911|Jun|16476|Jun oncogene	AK159196|Jun|16476|Jun oncogene	AK133722|Jun|16476|Jun oncogene	AK135023|Jun|16476|Jun oncogene	AK133867|Jun|16476|Jun oncogene	AK159220|Jun|16476|Jun oncogene	NM_010591|Jun|16476|Jun oncogene
mm9_v1_chr6_+_129483206_129483210	0.0356415	HOX{A6,A7,B6,B7}.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_-_52957518_52957569	0.0356042	HOX{A6,A7,B6,B7}.p2	NM_144945|Lgi2|246316|leucine-rich repeat LGI family, member 2	AJ487515|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr8_-_75094915_75095130	0.0354809	HOX{A6,A7,B6,B7}.p2	BC037511|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK152451|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK152748|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK035786|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK151539|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	NM_172396|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AF140607|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	BC055692|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK009731|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK148562|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK149156|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK169625|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK018610|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	BC060963|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK206814|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr2_+_128793137_128793209	0.0354738	HOX{A6,A7,B6,B7}.p2	AK050503|Zc3h6|78751|zinc finger CCCH type containing 6	NM_178404|Zc3h6|78751|zinc finger CCCH type containing 6	AK013610|Zc3h6|78751|zinc finger CCCH type containing 6	AK019345|Zc3h6|78751|zinc finger CCCH type containing 6	AK039171|Zc3h6|78751|zinc finger CCCH type containing 6	AK014766|Zc3h6|78751|zinc finger CCCH type containing 6	BC058173|Zc3h6|78751|zinc finger CCCH type containing 6
mm9_v1_chr2_-_129525512_129525673	0.0354653	HOX{A6,A7,B6,B7}.p2	BC137571|Pdyn|18610|prodynorphin	BC137572|Pdyn|18610|prodynorphin	AF026537|Pdyn|18610|prodynorphin	AK133597|Pdyn|18610|prodynorphin
mm9_v1_chr10_-_127984766_127984851	0.0354231	HOX{A6,A7,B6,B7}.p2	AK050662|Zc3h10|103284|zinc finger CCCH type containing 10	BC022677|Zc3h10|103284|zinc finger CCCH type containing 10	NM_134003|Zc3h10|103284|zinc finger CCCH type containing 10	AK031312|Zc3h10|103284|zinc finger CCCH type containing 10
mm9_v1_chr5_+_93602126_93602279	0.0353985	HOX{A6,A7,B6,B7}.p2	AK018083|Sept11|52398|septin 11	AK075989|Sept11|52398|septin 11
mm9_v1_chr6_+_124662272_124662375	0.0352814	HOX{A6,A7,B6,B7}.p2	AK158423|Phb2|12034|prohibitin 2	NM_007531|Phb2|12034|prohibitin 2	AK151952|Phb2|12034|prohibitin 2	AK152375|Phb2|12034|prohibitin 2	AK153368|Phb2|12034|prohibitin 2	AK132058|Phb2|12034|prohibitin 2	AK002334|Phb2|12034|prohibitin 2	AK011107|Phb2|12034|prohibitin 2	AK132052|Phb2|12034|prohibitin 2	AY211613|Phb2|12034|prohibitin 2	X78683|Phb2|12034|prohibitin 2	AK090088|Phb2|12034|prohibitin 2	BC145875|Phb2|12034|prohibitin 2
mm9_v1_chr4_+_136833403_136833549	0.0352497	HOX{A6,A7,B6,B7}.p2	AK012727|Wnt4|22417|wingless-related MMTV integration site 4	BC101962|Wnt4|22417|wingless-related MMTV integration site 4	BC103560|Wnt4|22417|wingless-related MMTV integration site 4	BC103561|Wnt4|22417|wingless-related MMTV integration site 4	BC103562|Wnt4|22417|wingless-related MMTV integration site 4	M89797|Wnt4|22417|wingless-related MMTV integration site 4	NM_009523|Wnt4|22417|wingless-related MMTV integration site 4
mm9_v1_chr14_+_13116767_13116814	0.0352291	HOX{A6,A7,B6,B7}.p2	BC057656|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr7_-_91262792_91262799	0.0352084	HOX{A6,A7,B6,B7}.p2	AK211213|Fam108c|70178|family with sequence similarity 108, member C
mm9_v1_chr9_-_44773594_44773682	0.0350111	HOX{A6,A7,B6,B7}.p2	BC025043|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028721|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC006649|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC021406|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028850|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK172893|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	NM_145400|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm9_v1_chr14_-_103746016_103746030	0.0349966	HOX{A6,A7,B6,B7}.p2	AK149225|Mycbp2|105689|MYC binding protein 2	NM_207215|Mycbp2|105689|MYC binding protein 2	AK048441|Mycbp2|105689|MYC binding protein 2	AK081652|Mycbp2|105689|MYC binding protein 2
mm9_v1_chr4_-_147278927_147279021	0.0349731	HOX{A6,A7,B6,B7}.p2	NM_133201|Mfn2|170731|mitofusin 2
mm9_v1_chr11_+_3102997_3103023	0.0349606	HOX{A6,A7,B6,B7}.p2	AK165678|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	NM_001166547|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	NM_001166549|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK128990|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr4_+_11631592_11631656	0.0348644	HOX{A6,A7,B6,B7}.p2	AK157655|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK158393|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK168401|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	NM_010276|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK153999|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK169699|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	U13053|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	BC029668|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK171336|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)
mm9_v1_chr1_-_172145380_172145502	0.0348297	HOX{A6,A7,B6,B7}.p2	Y10725|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr11_-_106474237_106474312	0.0347951	HOX{A6,A7,B6,B7}.p2	AK129434|Tex2|21763|testis expressed gene 2	NM_198292|Tex2|21763|testis expressed gene 2	AK168397|Tex2|21763|testis expressed gene 2
mm9_v1_chr2_-_87814819_87814819	0.0347696	HOX{A6,A7,B6,B7}.p2	AB061229|Olfr74|117005|olfactory receptor 74	NM_054091|Olfr74|117005|olfactory receptor 74
mm9_v1_chr12_+_85328810_85328840	0.0347552	HOX{A6,A7,B6,B7}.p2	NM_134188|Acot2|171210|acyl-CoA thioesterase 2	AK172617|Acot2|171210|acyl-CoA thioesterase 2	AK141651|Acot2|171210|acyl-CoA thioesterase 2	BC064469|Acot2|171210|acyl-CoA thioesterase 2
mm9_v1_chr4_-_115726385_115726456	0.0346144	HOX{A6,A7,B6,B7}.p2	BC024628|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr8_+_87604638_87604668	0.0345747	HOX{A6,A7,B6,B7}.p2	AK147129|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr14_+_31948038_31948038	0.0344858	HOX{A6,A7,B6,B7}.p2	BC011230|Nt5dc2|70021|5'-nucleotidase domain containing 2	NM_027289|Nt5dc2|70021|5'-nucleotidase domain containing 2
mm9_v1_chr3_-_95622554_95622875	0.0344599	HOX{A6,A7,B6,B7}.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chr4_+_137773045_137773112	0.0344525	HOX{A6,A7,B6,B7}.p2	NM_001122897|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr2_-_132073389_132073439	0.0344273	HOX{A6,A7,B6,B7}.p2	BC080755|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene
mm9_v1_chr8_+_131248283_131248313	0.034364	HOX{A6,A7,B6,B7}.p2	AK085828|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	U37029|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr4_-_135429471_135429602	0.0343624	HOX{A6,A7,B6,B7}.p2	AK218125|Pnrc2|52830|proline-rich nuclear receptor coactivator 2	AK077403|Pnrc2|52830|proline-rich nuclear receptor coactivator 2
mm9_v1_chr17_+_87682206_87682305	0.0343047	HOX{A6,A7,B6,B7}.p2	AK040578|Ttc7|225049|tetratricopeptide repeat domain 7	NM_028639|Ttc7|225049|tetratricopeptide repeat domain 7	AK050263|Ttc7|225049|tetratricopeptide repeat domain 7	AK090252|Ttc7|225049|tetratricopeptide repeat domain 7	AK153704|Ttc7|225049|tetratricopeptide repeat domain 7	AK080284|Ttc7|225049|tetratricopeptide repeat domain 7	AK040610|Ttc7|225049|tetratricopeptide repeat domain 7	AK004107|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr11_-_78311204_78311255	0.0342205	HOX{A6,A7,B6,B7}.p2	BC058534|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1	BC080850|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1	NM_001168521|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1	NM_172795|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1
mm9_v1_chr12_-_70891641_70891693	0.0341585	HOX{A6,A7,B6,B7}.p2	BC115909|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	BC118055|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	AK016781|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	NM_183294|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm9_v1_chr6_+_86799460_86799754	0.0341429	HOX{A6,A7,B6,B7}.p2	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr8_+_4166681_4166734	0.0340899	HOX{A6,A7,B6,B7}.p2	AK193949|Evi5l|213027|ecotropic viral integration site 5 like
mm9_v1_chr18_+_61085303_61085326	0.0340029	HOX{A6,A7,B6,B7}.p2	BC031745|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr5_+_22940294_22940297	0.0337735	HOX{A6,A7,B6,B7}.p2	BC103801|Mll5|69188|myeloid/lymphoid or mixed-lineage leukemia 5
mm9_v1_chr9_+_32031833_32031859	0.0337557	HOX{A6,A7,B6,B7}.p2	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr3_+_54496921_54497078	0.03375	HOX{A6,A7,B6,B7}.p2	AF139179|Fam48a|56790|family with sequence similarity 48, member A	NM_019995|Fam48a|56790|family with sequence similarity 48, member A	BC052702|Fam48a|56790|family with sequence similarity 48, member A	AK218402|Fam48a|56790|family with sequence similarity 48, member A
mm9_v1_chr4_+_80556574_80556717	0.0337377	HOX{A6,A7,B6,B7}.p2	NM_026821|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC030404|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC021501|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed
mm9_v1_chr4_-_155243505_155243560	0.033486	HOX{A6,A7,B6,B7}.p2	AK089229|Gltpd1|79554|glycolipid transfer protein domain containing 1	AK040664|Gltpd1|79554|glycolipid transfer protein domain containing 1	NM_024472|Gltpd1|79554|glycolipid transfer protein domain containing 1
mm9_v1_chr6_+_113433656_113433876	0.0333479	HOX{A6,A7,B6,B7}.p2	BC025932|Creld1|171508|cysteine-rich with EGF-like domains 1	AK186017|Creld1|171508|cysteine-rich with EGF-like domains 1	AK195695|Creld1|171508|cysteine-rich with EGF-like domains 1	AK208544|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr5_-_87997908_87998005	0.0332505	HOX{A6,A7,B6,B7}.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr15_+_21041206_21041206	0.0332342	HOX{A6,A7,B6,B7}.p2	BC086655|Cdh12|215654|cadherin 12	NM_001008420|Cdh12|215654|cadherin 12
mm9_v1_chr10_-_92185071_92185164	0.0332183	HOX{A6,A7,B6,B7}.p2	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr6_-_83720525_83720778	0.0332116	HOX{A6,A7,B6,B7}.p2	AK170049|Tex261|21766|testis expressed gene 261	X80425|Tex261|21766|testis expressed gene 261	AK214743|Tex261|21766|testis expressed gene 261
mm9_v1_chr11_-_95137035_95137140	0.0331963	HOX{A6,A7,B6,B7}.p2	AK179739|Myst2|217127|MYST histone acetyltransferase 2	AK178421|Myst2|217127|MYST histone acetyltransferase 2	AK179227|Myst2|217127|MYST histone acetyltransferase 2	AK186092|Myst2|217127|MYST histone acetyltransferase 2	AK203203|Myst2|217127|MYST histone acetyltransferase 2	AK204177|Myst2|217127|MYST histone acetyltransferase 2	AK212451|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr18_-_61825143_61825192	0.03314	HOX{A6,A7,B6,B7}.p2	AK087736|E330013P06|328968|hypothetical protein E330013P06
mm9_v1_chr10_+_21714509_21714532	0.0331178	HOX{A6,A7,B6,B7}.p2	BC005720|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr7_-_52317768_52317798	0.033101	HOX{A6,A7,B6,B7}.p2	AK005453|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr4_+_128404814_128404885	0.0330053	HOX{A6,A7,B6,B7}.p2	NM_001195083|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC051657|Phc2|54383|polyhomeotic-like 2 (Drosophila)	AB062362|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC071246|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chrX_-_54756877_54756933	0.0329954	HOX{A6,A7,B6,B7}.p2	AK138185|Gpr101|245424|G protein-coupled receptor 101	DQ198079|Gpr101|245424|G protein-coupled receptor 101	AK138370|Gpr101|245424|G protein-coupled receptor 101	NM_001033360|Gpr101|245424|G protein-coupled receptor 101
mm9_v1_chr19_-_16342088_16342126	0.0329444	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_60013141_60013246	0.0329365	HOX{A6,A7,B6,B7}.p2	AK040663|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr9_-_110892114_110892227	0.0328675	HOX{A6,A7,B6,B7}.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr17_-_37095420_37095443	0.0328065	HOX{A6,A7,B6,B7}.p2	AK005976|Znrd1|66136|zinc ribbon domain containing, 1	AK019152|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr9_-_103118185_103118198	0.0327414	HOX{A6,A7,B6,B7}.p2	M23016|Trf|22041|transferrin
mm9_v1_chr6_-_113678282_113678406	0.0327263	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_107759668_107759707	0.0325989	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_89141181_89141199	0.0325498	HOX{A6,A7,B6,B7}.p2	AF265232|Rttn|246102|rotatin	NM_175542|Rttn|246102|rotatin	AK083016|Rttn|246102|rotatin	AK141510|Rttn|246102|rotatin
mm9_v1_chr19_-_38199737_38199810	0.0325343	HOX{A6,A7,B6,B7}.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr11_+_70376359_70376411	0.0324722	HOX{A6,A7,B6,B7}.p2	NM_001045959|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_001045964|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_016713|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_176893|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB035697|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB041925|Mink1|50932|misshapen-like kinase 1 (zebrafish)
mm9_v1_chr7_+_115133880_115133880	0.0324697	HOX{A6,A7,B6,B7}.p2	NM_146926|Olfr477|258928|olfactory receptor 477
mm9_v1_chr18_+_10617756_10617866	0.0322067	HOX{A6,A7,B6,B7}.p2	AK007674|Snrpd1|20641|small nuclear ribonucleoprotein D1	NM_009226|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK011455|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK134582|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK005517|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK135979|Snrpd1|20641|small nuclear ribonucleoprotein D1	BC024875|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK013075|Snrpd1|20641|small nuclear ribonucleoprotein D1	M58558|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK017788|Snrpd1|20641|small nuclear ribonucleoprotein D1
mm9_v1_chr18_-_56732522_56732548	0.0321426	HOX{A6,A7,B6,B7}.p2	AK004991|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr19_+_46697882_46697901	0.0320777	HOX{A6,A7,B6,B7}.p2	AK078491|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK142695|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_001177813|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK052400|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr11_-_53113682_53113812	0.0320246	HOX{A6,A7,B6,B7}.p2	D85904|Hspa4|15525|heat shock protein 4
mm9_v1_chr7_-_133848235_133848282	0.0319899	HOX{A6,A7,B6,B7}.p2	BC053398|Coro1a|12721|coronin, actin binding protein 1A	BC002136|Coro1a|12721|coronin, actin binding protein 1A	AK075799|Coro1a|12721|coronin, actin binding protein 1A	AK146290|Coro1a|12721|coronin, actin binding protein 1A	AK155860|Coro1a|12721|coronin, actin binding protein 1A	AK172447|Coro1a|12721|coronin, actin binding protein 1A	AF495468|Coro1a|12721|coronin, actin binding protein 1A	NM_009898|Coro1a|12721|coronin, actin binding protein 1A	AK040885|Coro1a|12721|coronin, actin binding protein 1A	AK150962|Coro1a|12721|coronin, actin binding protein 1A	AK151755|Coro1a|12721|coronin, actin binding protein 1A	AK165296|Coro1a|12721|coronin, actin binding protein 1A	AK155527|Coro1a|12721|coronin, actin binding protein 1A
mm9_v1_chr5_-_31597792_31598351	0.031862	HOX{A6,A7,B6,B7}.p2	BC139278|Fndc4|64339|fibronectin type III domain containing 4	BC139292|Fndc4|64339|fibronectin type III domain containing 4	AK018154|Fndc4|64339|fibronectin type III domain containing 4	AK013203|Fndc4|64339|fibronectin type III domain containing 4	AK163183|Fndc4|64339|fibronectin type III domain containing 4	NM_022424|Fndc4|64339|fibronectin type III domain containing 4
mm9_v1_chr5_+_104475948_104476060	0.0317855	HOX{A6,A7,B6,B7}.p2	AK158058|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK004444|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK076500|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_028794|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC033921|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm9_v1_chr3_-_97628441_97628543	0.0316927	HOX{A6,A7,B6,B7}.p2	AK031066|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_001110163|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr10_-_81090257_81090352	0.0316851	HOX{A6,A7,B6,B7}.p2	AK013316|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)	BC052763|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)	NM_181586|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)
mm9_v1_chr3_-_51908927_51908997	0.0316317	HOX{A6,A7,B6,B7}.p2	NM_001004176|Maml3|433586|mastermind like 3 (Drosophila)
mm9_v1_chr3_+_96500294_96500403	0.0315903	HOX{A6,A7,B6,B7}.p2	NM_146135|Pias3|229615|protein inhibitor of activated STAT 3	AK040619|Pias3|229615|protein inhibitor of activated STAT 3	AK077551|Pias3|229615|protein inhibitor of activated STAT 3	AK085503|Pias3|229615|protein inhibitor of activated STAT 3	BC023128|Pias3|229615|protein inhibitor of activated STAT 3
mm9_v1_chr15_-_99305127_99305160	0.0315241	HOX{A6,A7,B6,B7}.p2	BC016225|Bcdin3d|75284|BCDIN3 domain containing	BC078455|Bcdin3d|75284|BCDIN3 domain containing	AK016154|Bcdin3d|75284|BCDIN3 domain containing	NM_029236|Bcdin3d|75284|BCDIN3 domain containing
mm9_v1_chr8_+_129823507_129823551	0.0315188	HOX{A6,A7,B6,B7}.p2	AY856081|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	AY856082|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013581|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013580|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)
mm9_v1_chr8_-_116372376_116372514	0.0314229	HOX{A6,A7,B6,B7}.p2	BC094674|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK140876|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm9_v1_chr1_-_146096156_146096233	0.0314208	HOX{A6,A7,B6,B7}.p2	BC052684|Rgs1|50778|regulator of G-protein signaling 1	AF215667|Rgs1|50778|regulator of G-protein signaling 1	BC028634|Rgs1|50778|regulator of G-protein signaling 1	AK154841|Rgs1|50778|regulator of G-protein signaling 1	AK170366|Rgs1|50778|regulator of G-protein signaling 1	AK089293|Rgs1|50778|regulator of G-protein signaling 1	AK138688|Rgs1|50778|regulator of G-protein signaling 1	AK154394|Rgs1|50778|regulator of G-protein signaling 1	AK170957|Rgs1|50778|regulator of G-protein signaling 1	AK171306|Rgs1|50778|regulator of G-protein signaling 1	NM_015811|Rgs1|50778|regulator of G-protein signaling 1
mm9_v1_chr14_+_21167383_21167391	0.0314086	HOX{A6,A7,B6,B7}.p2	AK031973|Fam149b|105428|family with sequence similarity 149, member B	NM_001177633|Fam149b|105428|family with sequence similarity 149, member B	NM_172379|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr14_+_118536326_118536519	0.0311993	HOX{A6,A7,B6,B7}.p2	NM_021434|Gpr180|58245|G protein-coupled receptor 180	AK169908|Gpr180|58245|G protein-coupled receptor 180	AB041545|Gpr180|58245|G protein-coupled receptor 180	AK170316|Gpr180|58245|G protein-coupled receptor 180	BC055726|Gpr180|58245|G protein-coupled receptor 180	AK053422|Gpr180|58245|G protein-coupled receptor 180	BC069981|Gpr180|58245|G protein-coupled receptor 180	AK212055|Gpr180|58245|G protein-coupled receptor 180
mm9_v1_chr12_+_109572514_109572610	0.0311051	HOX{A6,A7,B6,B7}.p2	BC018307|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1	AK140740|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1	AF094479|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1	NM_010010|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1
mm9_v1_chr5_-_115223373_115223529	0.0310988	HOX{A6,A7,B6,B7}.p2	AF148693|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK005365|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK017943|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC043062|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC056993|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077360|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_019834|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK220323|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077359|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK148029|Git2|26431|G protein-coupled receptor kinase-interactor 2
mm9_v1_chr11_-_69480763_69480942	0.0310902	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_121747377_121747377	0.0310625	HOX{A6,A7,B6,B7}.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr18_+_24796993_24796998	0.031042	HOX{A6,A7,B6,B7}.p2	AK213520|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)
mm9_v1_chr3_+_51219971_51220063	0.0310052	HOX{A6,A7,B6,B7}.p2	AF510858|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC050017|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr13_+_51503986_51504237	0.030951	HOX{A6,A7,B6,B7}.p2	NM_010101|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK029852|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK030134|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK078443|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK084944|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK085180|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK087076|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK087139|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK028043|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK047268|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK081919|S1pr3|13610|sphingosine-1-phosphate receptor 3	BC064007|S1pr3|13610|sphingosine-1-phosphate receptor 3	BC068176|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK083405|S1pr3|13610|sphingosine-1-phosphate receptor 3
mm9_v1_chr11_-_3831515_3831585	0.030929	HOX{A6,A7,B6,B7}.p2	AK197212|Tcn2|21452|transcobalamin 2	AF090686|Tcn2|21452|transcobalamin 2
mm9_v1_chr3_-_53461276_53461276	0.0308242	HOX{A6,A7,B6,B7}.p2	AB236662|Frem2|242022|Fras1 related extracellular matrix protein 2	NM_172862|Frem2|242022|Fras1 related extracellular matrix protein 2
mm9_v1_chr13_-_49748055_49748114	0.0308233	HOX{A6,A7,B6,B7}.p2	AK014919|Cenpp|66336|centromere protein P	BC147207|Cenpp|66336|centromere protein P	BC147208|Cenpp|66336|centromere protein P	AK012863|Cenpp|66336|centromere protein P	NM_025495|Cenpp|66336|centromere protein P	AK006234|Cenpp|66336|centromere protein P
mm9_v1_chr4_-_24778203_24778245	0.0307988	HOX{A6,A7,B6,B7}.p2	AK134944|Klhl32|212390|kelch-like 32 (Drosophila)	NM_001033531|Klhl32|212390|kelch-like 32 (Drosophila)	NM_001163020|Klhl32|212390|kelch-like 32 (Drosophila)
mm9_v1_chr9_+_56266618_56266679	0.0307959	HOX{A6,A7,B6,B7}.p2	AK088542|Hmg20a|66867|high mobility group 20A	AK032790|Hmg20a|66867|high mobility group 20A	AK039222|Hmg20a|66867|high mobility group 20A	AK004596|Hmg20a|66867|high mobility group 20A	AK086346|Hmg20a|66867|high mobility group 20A	AK154075|Hmg20a|66867|high mobility group 20A	BC013804|Hmg20a|66867|high mobility group 20A	DQ182735|Hmg20a|66867|high mobility group 20A	NM_025812|Hmg20a|66867|high mobility group 20A	AL355705|Hmg20a|66867|high mobility group 20A
mm9_v1_chr4_-_43591721_43591766	0.030554	HOX{A6,A7,B6,B7}.p2	AK173213|Gba2|230101|glucosidase beta 2	AK158174|Gba2|230101|glucosidase beta 2	NM_172692|Gba2|230101|glucosidase beta 2
mm9_v1_chr5_-_124804583_124804698	0.0305023	HOX{A6,A7,B6,B7}.p2	BC083075|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	NM_013812|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	AK004852|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr12_-_105143108_105143185	0.0300873	HOX{A6,A7,B6,B7}.p2	BC021325|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	NM_009245|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr1_-_186556329_186556486	0.0300407	HOX{A6,A7,B6,B7}.p2	AK036435|Hlx|15284|H2.0-like homeobox	BC064068|Hlx|15284|H2.0-like homeobox	NM_008250|Hlx|15284|H2.0-like homeobox	X58250|Hlx|15284|H2.0-like homeobox
mm9_v1_chr8_-_87549120_87549191	0.0300271	HOX{A6,A7,B6,B7}.p2	BC016453|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	BC083335|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AF039405|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	NM_019652|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK007827|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK171690|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
mm9_v1_chr2_+_162843196_162843279	0.0300162	HOX{A6,A7,B6,B7}.p2	AK160745|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	AK088467|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	NM_172150|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	AK144188|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	BC037708|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)
mm9_v1_chr11_-_109334465_109334613	0.029629	HOX{A6,A7,B6,B7}.p2	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr2_+_14151018_14151088	0.0295935	HOX{A6,A7,B6,B7}.p2	NM_008625|Mrc1|17533|mannose receptor, C type 1	Z11974|Mrc1|17533|mannose receptor, C type 1	BC141338|Mrc1|17533|mannose receptor, C type 1
mm9_v1_chr17_+_26260444_26260501	0.0294818	HOX{A6,A7,B6,B7}.p2	NM_024227|Mrpl28|68611|mitochondrial ribosomal protein L28	AK163190|Mrpl28|68611|mitochondrial ribosomal protein L28	AK046544|Mrpl28|68611|mitochondrial ribosomal protein L28	AK003727|Mrpl28|68611|mitochondrial ribosomal protein L28	BC005797|Mrpl28|68611|mitochondrial ribosomal protein L28	BC100322|Mrpl28|68611|mitochondrial ribosomal protein L28	BC002293|Mrpl28|68611|mitochondrial ribosomal protein L28	BC145522|Mrpl28|68611|mitochondrial ribosomal protein L28	BC145680|Mrpl28|68611|mitochondrial ribosomal protein L28	BC145682|Mrpl28|68611|mitochondrial ribosomal protein L28	AK031701|Mrpl28|68611|mitochondrial ribosomal protein L28	BC080753|Mrpl28|68611|mitochondrial ribosomal protein L28
mm9_v1_chr2_+_35477498_35477550	0.0294305	HOX{A6,A7,B6,B7}.p2	AK147593|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001114124|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr12_+_85758189_85758266	0.0294155	HOX{A6,A7,B6,B7}.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr2_+_69561103_69561149	0.0293617	HOX{A6,A7,B6,B7}.p2	AK135178|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC150694|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK134121|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	NM_001081086|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC027420|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr14_-_103379725_103379759	0.0292918	HOX{A6,A7,B6,B7}.p2	AK086988|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK032276|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr17_+_49071906_49072030	0.0292569	HOX{A6,A7,B6,B7}.p2	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr6_+_50150160_50150179	0.0292479	HOX{A6,A7,B6,B7}.p2	AK047380|Mpp6|56524|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm9_v1_chr17_-_25929201_25929366	0.0291607	HOX{A6,A7,B6,B7}.p2	AK132031|Fam173a|214917|family with sequence similarity 173, member A	BC096050|Fam173a|214917|family with sequence similarity 173, member A	NM_145410|Fam173a|214917|family with sequence similarity 173, member A	AK162337|Fam173a|214917|family with sequence similarity 173, member A	AK146214|Fam173a|214917|family with sequence similarity 173, member A	BC008155|Fam173a|214917|family with sequence similarity 173, member A
mm9_v1_chr15_-_9678531_9678622	0.0291097	HOX{A6,A7,B6,B7}.p2	AK041992|Spef2|320277|sperm flagellar 2	BC132098|Spef2|320277|sperm flagellar 2	BC132288|Spef2|320277|sperm flagellar 2	NM_177123|Spef2|320277|sperm flagellar 2	AK048961|Spef2|320277|sperm flagellar 2
mm9_v1_chr10_-_59079439_59079481	0.0290958	HOX{A6,A7,B6,B7}.p2	AK144727|Ccdc109a|215999|coiled-coil domain containing 109A	NM_001033259|Ccdc109a|215999|coiled-coil domain containing 109A
mm9_v1_chr13_-_106084378_106084564	0.029083	HOX{A6,A7,B6,B7}.p2	AK157911|Rnf180|71816|ring finger protein 180	AK032259|Rnf180|71816|ring finger protein 180	AK151379|Rnf180|71816|ring finger protein 180	AK152404|Rnf180|71816|ring finger protein 180	BC046775|Rnf180|71816|ring finger protein 180	BC075700|Rnf180|71816|ring finger protein 180
mm9_v1_chr15_-_7348393_7348394	0.0289498	HOX{A6,A7,B6,B7}.p2	AK158909|Egflam|268780|EGF-like, fibronectin type III and laminin G domains
mm9_v1_chr1_+_60237433_60237478	0.0289118	HOX{A6,A7,B6,B7}.p2	NM_173444|Nbeal1|269198|neurobeachin like 1
mm9_v1_chr12_+_85626260_85626364	0.0288923	HOX{A6,A7,B6,B7}.p2	NM_029880|Ptgr2|77219|prostaglandin reductase 2	BC021466|Ptgr2|77219|prostaglandin reductase 2	AK040396|Ptgr2|77219|prostaglandin reductase 2	AK020666|Ptgr2|77219|prostaglandin reductase 2	AK036168|Ptgr2|77219|prostaglandin reductase 2	AK041027|Ptgr2|77219|prostaglandin reductase 2	AK033693|Ptgr2|77219|prostaglandin reductase 2	AK159187|Ptgr2|77219|prostaglandin reductase 2	AK159932|Ptgr2|77219|prostaglandin reductase 2	AK021033|Ptgr2|77219|prostaglandin reductase 2	AK145232|Ptgr2|77219|prostaglandin reductase 2	AK168895|Ptgr2|77219|prostaglandin reductase 2	AK007522|Ptgr2|77219|prostaglandin reductase 2
mm9_v1_chr4_+_148478290_148478305	0.0288721	HOX{A6,A7,B6,B7}.p2	AK079634|Dffa|13347|DNA fragmentation factor, alpha subunit	BC058213|Dffa|13347|DNA fragmentation factor, alpha subunit
mm9_v1_chr11_+_109511476_109511595	0.0287094	HOX{A6,A7,B6,B7}.p2	AK158562|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha
mm9_v1_chr10_+_127759512_127759609	0.0287015	HOX{A6,A7,B6,B7}.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr18_+_31919533_31919621	0.0286933	HOX{A6,A7,B6,B7}.p2	BC056948|Ammecr1l|225339|AMME chromosomal region gene 1-like	NM_153515|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK151257|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr11_-_115209705_115209756	0.0286342	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_193961901_193961933	0.0285671	HOX{A6,A7,B6,B7}.p2	AK040839|Rcor3|214742|REST corepressor 3	AK050287|Rcor3|214742|REST corepressor 3
mm9_v1_chr19_-_45858019_45858052	0.0285545	HOX{A6,A7,B6,B7}.p2	AK145227|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	AK088774|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr10_-_126725826_126725958	0.0285203	HOX{A6,A7,B6,B7}.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr9_+_66006025_66006053	0.0285047	HOX{A6,A7,B6,B7}.p2	NM_010019|Dapk2|13143|death-associated protein kinase 2	AK158082|Dapk2|13143|death-associated protein kinase 2	AB018002|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chrX_-_91787338_91787350	0.0284499	HOX{A6,A7,B6,B7}.p2	AK220150|Maged1|94275|melanoma antigen, family D, 1	AK132248|Maged1|94275|melanoma antigen, family D, 1
mm9_v1_chr1_+_145586478_145586478	0.0284238	HOX{A6,A7,B6,B7}.p2	AK005853|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_001038593|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr7_+_72838302_72838367	0.0283171	HOX{A6,A7,B6,B7}.p2	NM_026795|Tm2d3|68634|TM2 domain containing 3	NM_178056|Tm2d3|68634|TM2 domain containing 3	AK003917|Tm2d3|68634|TM2 domain containing 3	BC024620|Tm2d3|68634|TM2 domain containing 3
mm9_v1_chr9_+_40494347_40494411	0.0283008	HOX{A6,A7,B6,B7}.p2	AY326421|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr7_+_117161839_117161861	0.0281268	HOX{A6,A7,B6,B7}.p2	AK187705|Ipo7|233726|importin 7
mm9_v1_chr17_-_74397195_74397255	0.0281171	HOX{A6,A7,B6,B7}.p2	AK138946|Srd5a2|94224|steroid 5 alpha-reductase 2	BC125510|Srd5a2|94224|steroid 5 alpha-reductase 2	AB049456|Srd5a2|94224|steroid 5 alpha-reductase 2	NM_053188|Srd5a2|94224|steroid 5 alpha-reductase 2
mm9_v1_chr2_-_160738055_160738063	0.0280959	HOX{A6,A7,B6,B7}.p2	BC054738|Emilin3|280635|elastin microfibril interfacer 3	BC057619|Emilin3|280635|elastin microfibril interfacer 3	NM_182840|Emilin3|280635|elastin microfibril interfacer 3
mm9_v1_chr9_-_21572496_21572571	0.0278307	HOX{A6,A7,B6,B7}.p2	AK212559|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr1_+_173259513_173259641	0.0278107	HOX{A6,A7,B6,B7}.p2	AK134547|Dedd|21945|death effector domain-containing	AK088329|Dedd|21945|death effector domain-containing	AK157342|Dedd|21945|death effector domain-containing	AK009728|Dedd|21945|death effector domain-containing	BC054445|Dedd|21945|death effector domain-containing
mm9_v1_chr5_-_144984391_144984416	0.0277135	HOX{A6,A7,B6,B7}.p2	AK169888|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK170108|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AB093295|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr12_-_86039703_86039802	0.0274334	HOX{A6,A7,B6,B7}.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr15_-_98748371_98748661	0.0272541	HOX{A6,A7,B6,B7}.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr14_-_56503083_56503107	0.0272086	HOX{A6,A7,B6,B7}.p2	BC065108|Cbln3|56410|cerebellin 3 precursor protein	NM_019820|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr17_+_53706283_53706299	0.0272056	HOX{A6,A7,B6,B7}.p2	AK156290|Kat2b|18519|K(lysine) acetyltransferase 2B	NM_020005|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr3_-_90193813_90193859	0.0269067	HOX{A6,A7,B6,B7}.p2	BC141134|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AK135190|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AJ577573|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	NM_011988|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	BC060052|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3
mm9_v1_chr5_+_111308801_111308858	0.026847	HOX{A6,A7,B6,B7}.p2	NM_024477|Ttc28|209683|tetratricopeptide repeat domain 28	AK009368|Ttc28|209683|tetratricopeptide repeat domain 28
mm9_v1_chr8_-_83262881_83263070	0.0268459	HOX{A6,A7,B6,B7}.p2	AF325921|Smarca5|93762|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC009130|Smarca5|93762|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AF375046|Smarca5|93762|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm9_v1_chr8_+_108225028_108225110	0.0267076	HOX{A6,A7,B6,B7}.p2	AK019153|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	NM_001047436|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm9_v1_chr17_-_65944300_65944335	0.0266989	HOX{A6,A7,B6,B7}.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr15_-_34424979_34425004	0.0266088	HOX{A6,A7,B6,B7}.p2	NM_008287|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr17_-_27075896_27076239	0.0264487	HOX{A6,A7,B6,B7}.p2	AK181681|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK187338|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC037500|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC021463|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr7_-_97624504_97624555	0.0263721	HOX{A6,A7,B6,B7}.p2	AK003201|Tmem126b|68472|transmembrane protein 126B	BC049680|Tmem126b|68472|transmembrane protein 126B	NM_026734|Tmem126b|68472|transmembrane protein 126B
mm9_v1_chr4_-_43591258_43591425	0.0263714	HOX{A6,A7,B6,B7}.p2	BC056935|Gba2|230101|glucosidase beta 2	BC031397|Gba2|230101|glucosidase beta 2	AK089192|Gba2|230101|glucosidase beta 2
mm9_v1_chr6_-_87338847_87338928	0.0263393	HOX{A6,A7,B6,B7}.p2	AK004474|Gkn3|68888|gastrokine 3	FN600638|Gkn3|68888|gastrokine 3	GU220566|Gkn3|68888|gastrokine 3	BC116955|Gkn3|68888|gastrokine 3	NM_026860|Gkn3|68888|gastrokine 3
mm9_v1_chr6_+_18816317_18816373	0.0262421	HOX{A6,A7,B6,B7}.p2	BC049731|Ankrd7|75196|ankyrin repeat domain 7	NM_001167757|Ankrd7|75196|ankyrin repeat domain 7	NM_029202|Ankrd7|75196|ankyrin repeat domain 7	AK077080|Ankrd7|75196|ankyrin repeat domain 7	AK015948|Ankrd7|75196|ankyrin repeat domain 7
mm9_v1_chr10_+_82092582_82092692	0.0262135	HOX{A6,A7,B6,B7}.p2	NM_011561|Tdg|21665|thymine DNA glycosylase	NM_172552|Tdg|21665|thymine DNA glycosylase	AK089915|Gm9855|624784|thymine DNA glycosylase pseudogene	BC085471|Tdg|21665|thymine DNA glycosylase	AK164643|Tdg|21665|thymine DNA glycosylase	AK166357|Tdg|21665|thymine DNA glycosylase	AK164090|Tdg|21665|thymine DNA glycosylase	AF069519|Gm9855|624784|thymine DNA glycosylase pseudogene	BC085470|Tdg|21665|thymine DNA glycosylase	AK053870|Tdg|21665|thymine DNA glycosylase	AK169768|Tdg|21665|thymine DNA glycosylase	BC010315|Tdg|21665|thymine DNA glycosylase
mm9_v1_chr12_-_21423296_21423379	0.0261222	HOX{A6,A7,B6,B7}.p2	BC090838|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	NM_011739|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC110680|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm9_v1_chr11_+_83164638_83164673	0.0260996	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_25639812_25639825	0.0260611	HOX{A6,A7,B6,B7}.p2	AK032525|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr4_+_111392586_111392619	0.0260286	HOX{A6,A7,B6,B7}.p2	AK051574|Spata6|67946|spermatogenesis associated 6	NM_026470|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr16_-_5222390_5222400	0.0259708	HOX{A6,A7,B6,B7}.p2	NM_001033220|AU021092|239691|expressed sequence AU021092
mm9_v1_chr1_-_25886551_25886551	0.0259048	HOX{A6,A7,B6,B7}.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr3_+_10012576_10012609	0.0258948	HOX{A6,A7,B6,B7}.p2	AK011551|Fabp5|16592|fatty acid binding protein 5, epidermal	AK166506|Fabp5|16592|fatty acid binding protein 5, epidermal	AK167389|Fabp5|16592|fatty acid binding protein 5, epidermal	AK008782|Fabp5|16592|fatty acid binding protein 5, epidermal	BC002008|Fabp5|16592|fatty acid binding protein 5, epidermal	BC053042|Fabp5|16592|fatty acid binding protein 5, epidermal	NM_010634|Fabp5|16592|fatty acid binding protein 5, epidermal	X70100|Fabp5|16592|fatty acid binding protein 5, epidermal	BC100543|Fabp5|16592|fatty acid binding protein 5, epidermal
mm9_v1_chr6_-_83781657_83781701	0.0258766	HOX{A6,A7,B6,B7}.p2	BC017133|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC034096|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC039969|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK173114|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK168804|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK045922|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr13_+_107737175_107737270	0.0257799	HOX{A6,A7,B6,B7}.p2	NM_025447|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK078401|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	BC019799|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK146188|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK011544|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK007759|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK015145|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK078186|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	AK161333|Dimt1|66254|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
mm9_v1_chr3_-_58984006_58984035	0.0257564	HOX{A6,A7,B6,B7}.p2	AF295366|Gpr87|84111|G protein-coupled receptor 87	NM_032399|Gpr87|84111|G protein-coupled receptor 87	BC125653|Gpr87|84111|G protein-coupled receptor 87	BC125655|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr1_-_156946739_156946767	0.025744	HOX{A6,A7,B6,B7}.p2	BC051986|Ier5|15939|immediate early response 5	BC021013|Ier5|15939|immediate early response 5	BC037147|Ier5|15939|immediate early response 5	AK146609|Ier5|15939|immediate early response 5	AK150461|Ier5|15939|immediate early response 5	AF079527|Ier5|15939|immediate early response 5	NM_010500|Ier5|15939|immediate early response 5
mm9_v1_chr3_+_136333793_136333805	0.0255796	HOX{A6,A7,B6,B7}.p2	BC096652|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr2_-_121890678_121890752	0.0255235	HOX{A6,A7,B6,B7}.p2	BC019404|Spg11|214585|spastic paraplegia 11
mm9_v1_chr2_-_151799566_151799709	0.0255126	HOX{A6,A7,B6,B7}.p2	AJ277454|Fam110a|73847|family with sequence similarity 110, member A	BC018162|Fam110a|73847|family with sequence similarity 110, member A	NM_028666|Fam110a|73847|family with sequence similarity 110, member A
mm9_v1_chr3_+_145587194_145587422	0.0254661	HOX{A6,A7,B6,B7}.p2	AK171687|Bcl10|12042|B-cell leukemia/lymphoma 10	AK156890|Bcl10|12042|B-cell leukemia/lymphoma 10	AK076082|Bcl10|12042|B-cell leukemia/lymphoma 10	AK172158|Bcl10|12042|B-cell leukemia/lymphoma 10	BC003703|Bcl10|12042|B-cell leukemia/lymphoma 10	AK169126|Bcl10|12042|B-cell leukemia/lymphoma 10	AK146236|Bcl10|12042|B-cell leukemia/lymphoma 10	AK168084|Bcl10|12042|B-cell leukemia/lymphoma 10	AK150883|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152563|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152847|Bcl10|12042|B-cell leukemia/lymphoma 10	AF057701|Bcl10|12042|B-cell leukemia/lymphoma 10	AF100339|Bcl10|12042|B-cell leukemia/lymphoma 10	AF134396|Bcl10|12042|B-cell leukemia/lymphoma 10	NM_009740|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172007|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172009|Bcl10|12042|B-cell leukemia/lymphoma 10	AJ006289|Bcl10|12042|B-cell leukemia/lymphoma 10	BC024379|Bcl10|12042|B-cell leukemia/lymphoma 10	AK140179|Bcl10|12042|B-cell leukemia/lymphoma 10	AF127387|Bcl10|12042|B-cell leukemia/lymphoma 10
mm9_v1_chr11_-_75268137_75268225	0.025386	HOX{A6,A7,B6,B7}.p2	NM_138950|Wdr81|192652|WD repeat domain 81
mm9_v1_chr11_-_6333725_6333827	0.0253288	HOX{A6,A7,B6,B7}.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chr5_+_92815912_92815933	0.025285	HOX{A6,A7,B6,B7}.p2	DQ519370|Art3|109979|ADP-ribosyltransferase 3
mm9_v1_chr5_+_34974750_34974884	0.0251884	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_72826340_72826402	0.0251832	HOX{A6,A7,B6,B7}.p2	BC085301|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49	NM_001024922|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49	BC099554|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49	AK139073|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
mm9_v1_chr5_+_74042618_74042624	0.0251783	HOX{A6,A7,B6,B7}.p2	NM_178387|Spata18|73472|spermatogenesis associated 18	BC050799|Spata18|73472|spermatogenesis associated 18
mm9_v1_chr4_+_125735850_125735887	0.0251525	HOX{A6,A7,B6,B7}.p2	AB154826|Oscp1|230751|organic solute carrier partner 1	BC045150|Oscp1|230751|organic solute carrier partner 1	AK077909|Oscp1|230751|organic solute carrier partner 1
mm9_v1_chr16_+_45094163_45094171	0.025134	HOX{A6,A7,B6,B7}.p2	AK132178|Ccdc80|67896|coiled-coil domain containing 80	NM_026439|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr8_-_105308910_105309020	0.0251095	HOX{A6,A7,B6,B7}.p2	BC046314|Cdh11|12552|cadherin 11	D31963|Cdh11|12552|cadherin 11	AK049652|Cdh11|12552|cadherin 11	AK045023|Cdh11|12552|cadherin 11	NM_009866|Cdh11|12552|cadherin 11
mm9_v1_chr18_+_37152024_37152120	0.025084	HOX{A6,A7,B6,B7}.p2	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr2_+_80171439_80171527	0.0250762	HOX{A6,A7,B6,B7}.p2	AK190686|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK204346|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK206826|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC002207|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr12_-_84938063_84938077	0.025058	HOX{A6,A7,B6,B7}.p2	AK090334|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr1_-_38954763_38954854	0.0249754	HOX{A6,A7,B6,B7}.p2	AF360543|Chst10|98388|carbohydrate sulfotransferase 10	AK046415|Chst10|98388|carbohydrate sulfotransferase 10	AK171758|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chr11_-_70051361_70051426	0.024937	HOX{A6,A7,B6,B7}.p2	AK169173|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK170380|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK003842|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177601|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177603|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177606|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177607|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_026757|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_145758|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr15_+_6395353_6395370	0.0248957	HOX{A6,A7,B6,B7}.p2	X05475|C9|12279|complement component 9
mm9_v1_chr8_-_95572090_95572178	0.0248954	HOX{A6,A7,B6,B7}.p2	BC089371|Ces1a|244595|carboxylesterase 1A	NM_001013764|Ces1a|244595|carboxylesterase 1A
mm9_v1_chr17_+_27977018_27977091	0.0248647	HOX{A6,A7,B6,B7}.p2	NM_011432|Snrpc|20630|U1 small nuclear ribonucleoprotein C	AK137213|Snrpc|20630|U1 small nuclear ribonucleoprotein C	AK168973|Snrpc|20630|U1 small nuclear ribonucleoprotein C	BC008243|Snrpc|20630|U1 small nuclear ribonucleoprotein C	BC092266|Snrpc|20630|U1 small nuclear ribonucleoprotein C	U70315|Snrpc|20630|U1 small nuclear ribonucleoprotein C	X96767|Snrpc|20630|U1 small nuclear ribonucleoprotein C
mm9_v1_chr1_-_135650027_135650097	0.0247168	HOX{A6,A7,B6,B7}.p2	EU493094|Atp2b4|381290|ATPase, Ca++ transporting, plasma membrane 4	EU493095|Atp2b4|381290|ATPase, Ca++ transporting, plasma membrane 4	NM_001167949|Atp2b4|381290|ATPase, Ca++ transporting, plasma membrane 4	NM_213616|Atp2b4|381290|ATPase, Ca++ transporting, plasma membrane 4
mm9_v1_chr17_-_57199207_57199302	0.0247116	HOX{A6,A7,B6,B7}.p2	BC072660|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_025877|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr17_+_46787285_46787649	0.0246366	HOX{A6,A7,B6,B7}.p2	AK155583|Cul7|66515|cullin 7	AK170580|Cul7|66515|cullin 7	NM_025611|Cul7|66515|cullin 7	AK082134|Cul7|66515|cullin 7	BC138998|Cul7|66515|cullin 7	BC139000|Cul7|66515|cullin 7	AK166135|Cul7|66515|cullin 7	AK170808|Cul7|66515|cullin 7	AK155454|Cul7|66515|cullin 7	AK144856|Cul7|66515|cullin 7	AK147156|Cul7|66515|cullin 7	AK147905|Cul7|66515|cullin 7
mm9_v1_chr8_+_97579002_97579028	0.0245797	HOX{A6,A7,B6,B7}.p2	AY352586|Ccdc135|330830|coiled-coil domain containing 135	NM_001042715|Ccdc135|330830|coiled-coil domain containing 135	AK076786|Ccdc135|330830|coiled-coil domain containing 135	BC117982|Ccdc135|330830|coiled-coil domain containing 135	BC117983|Ccdc135|330830|coiled-coil domain containing 135
mm9_v1_chr2_+_155062268_155062350	0.0245729	HOX{A6,A7,B6,B7}.p2	NM_025947|Dynlrb1|67068|dynein light chain roadblock-type 1	AK166685|Dynlrb1|67068|dynein light chain roadblock-type 1	BC099423|Dynlrb1|67068|dynein light chain roadblock-type 1	AK008595|Dynlrb1|67068|dynein light chain roadblock-type 1	BC125610|Dynlrb1|67068|dynein light chain roadblock-type 1	BC125648|Dynlrb1|67068|dynein light chain roadblock-type 1	AK002359|Dynlrb1|67068|dynein light chain roadblock-type 1	AK003435|Dynlrb1|67068|dynein light chain roadblock-type 1
mm9_v1_chr11_+_60745534_60745749	0.0244507	HOX{A6,A7,B6,B7}.p2	AK008141|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166255|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167442|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK011002|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK053378|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK150067|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166507|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167209|Map2k3|26397|mitogen-activated protein kinase kinase 3	NM_008928|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK159379|Map2k3|26397|mitogen-activated protein kinase kinase 3	BC007467|Map2k3|26397|mitogen-activated protein kinase kinase 3	D87115|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK168710|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK179609|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK181928|Map2k3|26397|mitogen-activated protein kinase kinase 3
mm9_v1_chr4_+_116667905_116667941	0.0244114	HOX{A6,A7,B6,B7}.p2	AK163323|Hectd3|76608|HECT domain containing 3	AK165482|Hectd3|76608|HECT domain containing 3	AK154378|Hectd3|76608|HECT domain containing 3	AK139305|Hectd3|76608|HECT domain containing 3	AK051385|Hectd3|76608|HECT domain containing 3	AK155290|Hectd3|76608|HECT domain containing 3	AK155676|Hectd3|76608|HECT domain containing 3	AK170930|Hectd3|76608|HECT domain containing 3
mm9_v1_chr10_+_127669118_127669147	0.0243976	HOX{A6,A7,B6,B7}.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr14_+_120674886_120674908	0.0243446	HOX{A6,A7,B6,B7}.p2	NM_175341|Mbnl2|105559|muscleblind-like 2	NM_207515|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr4_-_58219648_58219730	0.0242815	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_21038160_21038293	0.0241548	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_71008808_71008844	0.024141	HOX{A6,A7,B6,B7}.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chrX_-_39265047_39265129	0.0240944	HOX{A6,A7,B6,B7}.p2	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr2_-_66094647_66094696	0.0238726	HOX{A6,A7,B6,B7}.p2	BC151199|Ttc21b|73668|tetratricopeptide repeat domain 21B	BC172115|Ttc21b|73668|tetratricopeptide repeat domain 21B	DQ011164|Ttc21b|73668|tetratricopeptide repeat domain 21B	NM_001047604|Ttc21b|73668|tetratricopeptide repeat domain 21B
mm9_v1_chr12_-_32635399_32635399	0.0238204	HOX{A6,A7,B6,B7}.p2	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr9_+_21807437_21807509	0.0237025	HOX{A6,A7,B6,B7}.p2	AK153931|Prkcsh|19089|protein kinase C substrate 80K-H	AK159705|Prkcsh|19089|protein kinase C substrate 80K-H	AK137661|Prkcsh|19089|protein kinase C substrate 80K-H	NM_008925|Prkcsh|19089|protein kinase C substrate 80K-H	U92794|Prkcsh|19089|protein kinase C substrate 80K-H	BC009816|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr11_-_113612099_113612107	0.0235759	HOX{A6,A7,B6,B7}.p2	AK146141|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	AK168364|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr19_+_46130978_46131205	0.0235656	HOX{A6,A7,B6,B7}.p2	NM_001081214|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK147947|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK044522|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK122322|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	BC066048|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK180476|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm9_v1_chr15_+_100766701_100766755	0.0235607	HOX{A6,A7,B6,B7}.p2	NM_011323|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	U26707|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AF049617|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr2_-_165709697_165709718	0.0235261	HOX{A6,A7,B6,B7}.p2	AK003657|Zmynd8|228880|zinc finger, MYND-type containing 8
mm9_v1_chr4_+_151706542_151706590	0.023466	HOX{A6,A7,B6,B7}.p2	AK207296|Rpl22|19934|ribosomal protein L22
mm9_v1_chr2_+_173902521_173902654	0.0234421	HOX{A6,A7,B6,B7}.p2	AK078110|Stx16|228960|syntaxin 16	NM_001102423|Stx16|228960|syntaxin 16	NM_001102424|Stx16|228960|syntaxin 16	NM_001102425|Stx16|228960|syntaxin 16	NM_172675|Stx16|228960|syntaxin 16	BC094436|Stx16|228960|syntaxin 16	BC095989|Stx16|228960|syntaxin 16	BC138544|Stx16|228960|syntaxin 16
mm9_v1_chr8_-_87370656_87370769	0.0234156	HOX{A6,A7,B6,B7}.p2	EU639407|Calr|12317|calreticulin	BC003453|Calr|12317|calreticulin	AK136191|Calr|12317|calreticulin	AK160197|Calr|12317|calreticulin	M92988|Calr|12317|calreticulin	X14926|Calr|12317|calreticulin	AK075605|Calr|12317|calreticulin
mm9_v1_chr12_-_86715612_86715842	0.023401	HOX{A6,A7,B6,B7}.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr8_+_91220965_91221031	0.0233119	HOX{A6,A7,B6,B7}.p2	AK147426|Cyld|74256|cylindromatosis (turban tumor syndrome)	BC042438|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK039054|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr7_+_13063644_13063667	0.0232031	HOX{A6,A7,B6,B7}.p2	AK032301|Zfp606|67370|zinc finger protein 606	AK139269|Zfp606|67370|zinc finger protein 606	NM_001039951|Zfp606|67370|zinc finger protein 606	NM_026112|Zfp606|67370|zinc finger protein 606	AK010575|Zfp606|67370|zinc finger protein 606
mm9_v1_chr18_-_52688607_52688694	0.0231805	HOX{A6,A7,B6,B7}.p2	AK135213|Lox|16948|lysyl oxidase
mm9_v1_chr8_+_97296093_97296104	0.023093	HOX{A6,A7,B6,B7}.p2	AB030188|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK078285|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138214|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138472|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138574|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK154646|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr14_-_55305729_55305777	0.0230472	HOX{A6,A7,B6,B7}.p2	AK011698|Acin1|56215|apoptotic chromatin condensation inducer 1	AF168782|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085473|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_023190|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr11_-_116976291_116976337	0.0230099	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_116480136_116480166	0.0229754	HOX{A6,A7,B6,B7}.p2	BC023109|Toe1|68276|target of EGR1, member 1 (nuclear)	AK082975|Toe1|68276|target of EGR1, member 1 (nuclear)	AK016889|Toe1|68276|target of EGR1, member 1 (nuclear)	AK019829|Toe1|68276|target of EGR1, member 1 (nuclear)	NM_026654|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr10_-_95010006_95010009	0.0228393	HOX{A6,A7,B6,B7}.p2	AK190818|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK196789|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK201590|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK202794|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4
mm9_v1_chr4_+_125701902_125702025	0.022838	HOX{A6,A7,B6,B7}.p2	AK144318|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	NM_007782|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	AK089305|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	M58288|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC115865|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC116635|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)
mm9_v1_chr7_-_107805466_107805495	0.0227768	HOX{A6,A7,B6,B7}.p2	AF071000|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF100613|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163186|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163187|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr18_+_35713033_35713097	0.0227076	HOX{A6,A7,B6,B7}.p2	AK012754|Matr3|17184|matrin 3	AK041908|Matr3|17184|matrin 3	AK080350|Matr3|17184|matrin 3
mm9_v1_chr6_+_29997972_29998071	0.0226851	HOX{A6,A7,B6,B7}.p2	AK082580|Nrf1|18181|nuclear respiratory factor 1	NM_001164226|Nrf1|18181|nuclear respiratory factor 1	NM_001164227|Nrf1|18181|nuclear respiratory factor 1	NM_001164228|Nrf1|18181|nuclear respiratory factor 1	NM_001164230|Nrf1|18181|nuclear respiratory factor 1	NM_010938|Nrf1|18181|nuclear respiratory factor 1	AK029034|Nrf1|18181|nuclear respiratory factor 1	AK014494|Nrf1|18181|nuclear respiratory factor 1	AK036604|Nrf1|18181|nuclear respiratory factor 1	AK037697|Nrf1|18181|nuclear respiratory factor 1	AF098077|Nrf1|18181|nuclear respiratory factor 1	AF064728|Nrf1|18181|nuclear respiratory factor 1	AK050861|Nrf1|18181|nuclear respiratory factor 1	AK134483|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr6_-_86634476_86634528	0.0226384	HOX{A6,A7,B6,B7}.p2	AK011937|Snrnp27|66618|small nuclear ribonucleoprotein 27 (U4/U6.U5)	NM_025665|Snrnp27|66618|small nuclear ribonucleoprotein 27 (U4/U6.U5)	BC027564|Snrnp27|66618|small nuclear ribonucleoprotein 27 (U4/U6.U5)	AK160190|Snrnp27|66618|small nuclear ribonucleoprotein 27 (U4/U6.U5)	AK045231|Snrnp27|66618|small nuclear ribonucleoprotein 27 (U4/U6.U5)
mm9_v1_chr7_-_54051250_54051427	0.0226295	HOX{A6,A7,B6,B7}.p2	BC082542|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005247|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005248|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001167864|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	BC046443|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chr7_+_19766490_19766570	0.0225439	HOX{A6,A7,B6,B7}.p2	NM_001162996|Eml2|72205|echinoderm microtubule associated protein like 2	NM_028153|Eml2|72205|echinoderm microtubule associated protein like 2	BC055476|Eml2|72205|echinoderm microtubule associated protein like 2	AK005562|Eml2|72205|echinoderm microtubule associated protein like 2
mm9_v1_chr15_+_103129767_103129829	0.0224959	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_135096100_135096123	0.0224444	HOX{A6,A7,B6,B7}.p2	BC023227|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr6_+_64992810_64992853	0.0223982	HOX{A6,A7,B6,B7}.p2	AK134442|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK011724|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK122454|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr7_-_7230911_7230973	0.0223298	HOX{A6,A7,B6,B7}.p2	AK046541|Vmn2r29|76229|vomeronasal 2, receptor 29	AK084962|Vmn2r29|76229|vomeronasal 2, receptor 29	BC096375|Vmn2r29|76229|vomeronasal 2, receptor 29	AK018294|Vmn2r29|76229|vomeronasal 2, receptor 29
mm9_v1_chr11_+_97660946_97661134	0.0222064	HOX{A6,A7,B6,B7}.p2	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr8_-_97125464_97125573	0.0221889	HOX{A6,A7,B6,B7}.p2	BC023158|Fam192a|102122|family with sequence similarity 192, member A	AK033988|Fam192a|102122|family with sequence similarity 192, member A	AK050704|Fam192a|102122|family with sequence similarity 192, member A
mm9_v1_chr4_+_116768960_116768960	0.0221135	HOX{A6,A7,B6,B7}.p2	AB010833|Ptch2|19207|patched homolog 2	NM_008958|Ptch2|19207|patched homolog 2
mm9_v1_chr2_+_87642546_87642547	0.0220749	HOX{A6,A7,B6,B7}.p2	BC140120|Olfr1143|258290|olfactory receptor 1143	BC140161|Olfr1143|258290|olfactory receptor 1143	BC140202|Olfr1143|258290|olfactory receptor 1143	NM_146293|Olfr1143|258290|olfactory receptor 1143
mm9_v1_chr2_-_120796359_120796379	0.0220199	HOX{A6,A7,B6,B7}.p2	AK132284|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr17_+_24665193_24665201	0.0219009	HOX{A6,A7,B6,B7}.p2	AK011460|2610019E17Rik|75614|RIKEN cDNA 2610019E17 gene
mm9_v1_chr6_+_83059068_83059160	0.021874	HOX{A6,A7,B6,B7}.p2	BC022162|Mrpl53|68499|mitochondrial ribosomal protein L53	AK003549|Mrpl53|68499|mitochondrial ribosomal protein L53	NM_026744|Mrpl53|68499|mitochondrial ribosomal protein L53
mm9_v1_chr7_-_129210524_129210583	0.0218173	HOX{A6,A7,B6,B7}.p2	AK129469|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK014324|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK076043|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK169225|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK167506|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	BC025907|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	NM_026140|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr7_-_19865386_19865397	0.0217637	HOX{A6,A7,B6,B7}.p2	BC096372|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	AK044232|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	AK044334|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	NM_177691|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
mm9_v1_chr14_-_37690597_37690679	0.0216497	HOX{A6,A7,B6,B7}.p2	AK084686|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr11_+_83116262_83116315	0.0215479	HOX{A6,A7,B6,B7}.p2	AK004975|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit
mm9_v1_chr3_+_88425352_88425437	0.0215241	HOX{A6,A7,B6,B7}.p2	AK167628|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK171223|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr4_+_126850123_126850181	0.0214444	HOX{A6,A7,B6,B7}.p2	AK158868|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3
mm9_v1_chr11_+_19824374_19824394	0.0214198	HOX{A6,A7,B6,B7}.p2	BC066013|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr6_+_148893645_148893712	0.0213554	HOX{A6,A7,B6,B7}.p2	BC106181|3010003L21Rik|109163|RIKEN cDNA 3010003L21 gene	AK087382|3010003L21Rik|109163|RIKEN cDNA 3010003L21 gene
mm9_v1_chr15_-_102993757_102993775	0.0213305	HOX{A6,A7,B6,B7}.p2	AK045411|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK172510|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK004735|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr19_+_44368588_44368593	0.0212886	HOX{A6,A7,B6,B7}.p2	BC040384|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr19_-_7044198_7044291	0.0211951	HOX{A6,A7,B6,B7}.p2	U43144|Plcb3|18797|phospholipase C, beta 3	AK164300|Plcb3|18797|phospholipase C, beta 3	BC035928|Plcb3|18797|phospholipase C, beta 3	NM_008874|Plcb3|18797|phospholipase C, beta 3	AK159679|Plcb3|18797|phospholipase C, beta 3	AK220180|Plcb3|18797|phospholipase C, beta 3	AK146793|Plcb3|18797|phospholipase C, beta 3
mm9_v1_chr6_-_127076410_127076426	0.0211726	HOX{A6,A7,B6,B7}.p2	AK011225|Ccnd2|12444|cyclin D2
mm9_v1_chr7_+_97177668_97177676	0.021115	HOX{A6,A7,B6,B7}.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chr1_-_55084269_55084299	0.021055	HOX{A6,A7,B6,B7}.p2	AK012632|Sf3b1|81898|splicing factor 3b, subunit 1	BC037098|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr5_-_115608153_115608220	0.0210502	HOX{A6,A7,B6,B7}.p2	AK031525|Mlec|109154|malectin	AK075940|Mlec|109154|malectin	NM_175403|Mlec|109154|malectin
mm9_v1_chr11_+_20991293_20991320	0.0209461	HOX{A6,A7,B6,B7}.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr15_+_75824198_75824279	0.0209443	HOX{A6,A7,B6,B7}.p2	BC048082|Mapk15|332110|mitogen-activated protein kinase 15	NM_177922|Mapk15|332110|mitogen-activated protein kinase 15
mm9_v1_chr13_+_43493729_43493803	0.0209077	HOX{A6,A7,B6,B7}.p2	NM_023554|Nol7|70078|nucleolar protein 7	AK008670|Nol7|70078|nucleolar protein 7	AK019972|Nol7|70078|nucleolar protein 7	AB041566|Nol7|70078|nucleolar protein 7	AK032963|Nol7|70078|nucleolar protein 7	BC130012|Nol7|70078|nucleolar protein 7	BC090637|Nol7|70078|nucleolar protein 7
mm9_v1_chr4_-_114806556_114806590	0.0208954	HOX{A6,A7,B6,B7}.p2	AK038526|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1	BC113125|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1	AJ786769|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1	NM_001003947|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1
mm9_v1_chr3_+_134944239_134944255	0.0208762	HOX{A6,A7,B6,B7}.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr3_+_51028368_51028391	0.020851	HOX{A6,A7,B6,B7}.p2	AK087790|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	NM_009834|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF183960|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK149340|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chr5_+_150821249_150821339	0.0208429	HOX{A6,A7,B6,B7}.p2	AF346501|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	NM_080468|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC120741|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144802|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144803|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	AK034592|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2
mm9_v1_chr15_-_73015227_73015327	0.0207343	HOX{A6,A7,B6,B7}.p2	BC128379|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC129922|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	AB081472|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC096465|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2
mm9_v1_chr7_+_54110791_54110836	0.0206483	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_140330097_140330124	0.0206094	HOX{A6,A7,B6,B7}.p2	AB013850|Padi4|18602|peptidyl arginine deiminase, type IV	AK137625|Padi4|18602|peptidyl arginine deiminase, type IV	NM_011061|Padi4|18602|peptidyl arginine deiminase, type IV
mm9_v1_chr14_+_21514178_21514220	0.0205663	HOX{A6,A7,B6,B7}.p2	NM_028428|Fut11|73068|fucosyltransferase 11	AJ542393|Fut11|73068|fucosyltransferase 11	AK029717|Fut11|73068|fucosyltransferase 11	AK030310|Fut11|73068|fucosyltransferase 11	AK046461|Fut11|73068|fucosyltransferase 11	BC138555|Fut11|73068|fucosyltransferase 11	BC145735|Fut11|73068|fucosyltransferase 11	AK032390|Fut11|73068|fucosyltransferase 11	AK014029|Fut11|73068|fucosyltransferase 11
mm9_v1_chr9_+_21330620_21330720	0.0205436	HOX{A6,A7,B6,B7}.p2	NM_001198794|AB124611|382062|cDNA sequence AB124611	NM_206536|AB124611|382062|cDNA sequence AB124611	AK154442|AB124611|382062|cDNA sequence AB124611	AK168311|AB124611|382062|cDNA sequence AB124611	AK170200|AB124611|382062|cDNA sequence AB124611	AK162293|AB124611|382062|cDNA sequence AB124611	AK137593|AB124611|382062|cDNA sequence AB124611	AB124611|AB124611|382062|cDNA sequence AB124611	AB124612|AB124611|382062|cDNA sequence AB124611
mm9_v1_chr15_+_99240353_99240379	0.0205366	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_109371529_109371618	0.0205268	HOX{A6,A7,B6,B7}.p2	AK159933|Pgap2|233575|post-GPI attachment to proteins 2	AK159950|Pgap2|233575|post-GPI attachment to proteins 2	AK136764|Pgap2|233575|post-GPI attachment to proteins 2	AK146442|Pgap2|233575|post-GPI attachment to proteins 2	BC004794|Pgap2|233575|post-GPI attachment to proteins 2	NM_145583|Pgap2|233575|post-GPI attachment to proteins 2	AK152931|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr4_-_44180323_44180519	0.0204312	HOX{A6,A7,B6,B7}.p2	BC062976|Rnf38|73469|ring finger protein 38	BC060730|Rnf38|73469|ring finger protein 38	NM_175201|Rnf38|73469|ring finger protein 38	AK006888|Rnf38|73469|ring finger protein 38
mm9_v1_chr14_+_28290299_28290355	0.0204	HOX{A6,A7,B6,B7}.p2	AK173099|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed
mm9_v1_chr2_-_112208115_112208198	0.020398	HOX{A6,A7,B6,B7}.p2	AK167745|Tmem85|68032|transmembrane protein 85	BC051926|Tmem85|68032|transmembrane protein 85	AK003668|Tmem85|68032|transmembrane protein 85	AK012047|Tmem85|68032|transmembrane protein 85	AK078165|Tmem85|68032|transmembrane protein 85	NM_026519|Tmem85|68032|transmembrane protein 85
mm9_v1_chr6_-_83071414_83071464	0.020211	HOX{A6,A7,B6,B7}.p2	U40825|Wbp1|22377|WW domain binding protein 1	AK170907|Wbp1|22377|WW domain binding protein 1	NM_001083922|Wbp1|22377|WW domain binding protein 1	NM_001083923|Wbp1|22377|WW domain binding protein 1	NM_016757|Wbp1|22377|WW domain binding protein 1	AK152822|Wbp1|22377|WW domain binding protein 1
mm9_v1_chr11_+_48615302_48615310	0.0202075	HOX{A6,A7,B6,B7}.p2	AK166889|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr10_+_13220952_13220993	0.0201998	HOX{A6,A7,B6,B7}.p2	AK035607|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK151204|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK044790|Fuca2|66848|fucosidase, alpha-L- 2, plasma
mm9_v1_chr11_-_100573772_100573800	0.0201119	HOX{A6,A7,B6,B7}.p2	AK155791|Kat2a|14534|K(lysine) acetyltransferase 2A	AK155842|Kat2a|14534|K(lysine) acetyltransferase 2A	NM_001038010|Kat2a|14534|K(lysine) acetyltransferase 2A	NM_020004|Kat2a|14534|K(lysine) acetyltransferase 2A
mm9_v1_chr2_-_164605216_164605262	0.0200698	HOX{A6,A7,B6,B7}.p2	BC024390|Tnnc2|21925|troponin C2, fast	AK133548|Tnnc2|21925|troponin C2, fast	NM_009394|Tnnc2|21925|troponin C2, fast
mm9_v1_chr1_+_43502537_43502605	0.0200608	HOX{A6,A7,B6,B7}.p2	AK051665|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	NM_010879|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	AK014949|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chr4_+_125735808_125735847	0.0200546	HOX{A6,A7,B6,B7}.p2	NM_172701|Oscp1|230751|organic solute carrier partner 1	AK077467|Oscp1|230751|organic solute carrier partner 1	AB286960|Oscp1|230751|organic solute carrier partner 1
mm9_v1_chr8_+_124474484_124474529	0.0200003	HOX{A6,A7,B6,B7}.p2	BC021650|Banp|53325|BTG3 associated nuclear protein	BC022168|Banp|53325|BTG3 associated nuclear protein	AK154088|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr9_-_15162109_15162147	0.0199549	HOX{A6,A7,B6,B7}.p2	AK051561|5830418K08Rik|319675|RIKEN cDNA 5830418K08 gene
mm9_v1_chr9_-_119002573_119002594	0.0198647	HOX{A6,A7,B6,B7}.p2	BC015249|Plcd1|18799|phospholipase C, delta 1	BC025798|Plcd1|18799|phospholipase C, delta 1
mm9_v1_chr4_+_116480325_116480357	0.0197792	HOX{A6,A7,B6,B7}.p2	NM_001159581|Mutyh|70603|mutY homolog (E. coli)	NM_133250|Mutyh|70603|mutY homolog (E. coli)	AK077546|Mutyh|70603|mutY homolog (E. coli)	AK156790|Mutyh|70603|mutY homolog (E. coli)	AK017730|Mutyh|70603|mutY homolog (E. coli)	AB117939|Mutyh|70603|mutY homolog (E. coli)	BC057942|Mutyh|70603|mutY homolog (E. coli)
mm9_v1_chr3_+_94736993_94737043	0.0197425	HOX{A6,A7,B6,B7}.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr10_-_53795556_53795601	0.0197315	HOX{A6,A7,B6,B7}.p2	AK031038|Man1a|17155|mannosidase 1, alpha	NM_008548|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr3_+_95428870_95428903	0.0196131	HOX{A6,A7,B6,B7}.p2	AK011334|Ensa|56205|endosulfine alpha	AK019170|Ensa|56205|endosulfine alpha	NM_001026212|Ensa|56205|endosulfine alpha	NM_019561|Ensa|56205|endosulfine alpha
mm9_v1_chrX_+_50265390_50265552	0.0196114	HOX{A6,A7,B6,B7}.p2	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr13_-_23515682_23515773	0.0196087	HOX{A6,A7,B6,B7}.p2	AB021860|Abt1|30946|activator of basal transcription 1	AK019220|Abt1|30946|activator of basal transcription 1	AK019221|Abt1|30946|activator of basal transcription 1	BC082609|Abt1|30946|activator of basal transcription 1	AK009557|Abt1|30946|activator of basal transcription 1	AK029222|Abt1|30946|activator of basal transcription 1	NM_013924|Abt1|30946|activator of basal transcription 1
mm9_v1_chr11_+_83116148_83116241	0.0195898	HOX{A6,A7,B6,B7}.p2	AK138434|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	NM_001035854|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	NM_027915|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	AK030505|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	BC046772|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	AK032617|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit
mm9_v1_chr11_-_97521633_97521716	0.01957	HOX{A6,A7,B6,B7}.p2	AK052674|LOC432596|432596|similar to Als2 protein
mm9_v1_chr11_-_77997042_77997098	0.0195317	HOX{A6,A7,B6,B7}.p2	BC026656|Rpl23a|268449|ribosomal protein L23A	BC096637|Rpl23a|268449|ribosomal protein L23A	AF452721|Rpl23a|268449|ribosomal protein L23A	BC029892|Rpl23a|268449|ribosomal protein L23A	AK028387|Rpl23a|268449|ribosomal protein L23A	AK152095|Rpl23a|268449|ribosomal protein L23A	BC086884|Rpl23a|268449|ribosomal protein L23A	BC086883|Rpl23a|268449|ribosomal protein L23A	BC125640|Rpl23a|268449|ribosomal protein L23A	BC125642|Rpl23a|268449|ribosomal protein L23A	NM_207523|Rpl23a|268449|ribosomal protein L23A
mm9_v1_chr1_-_189039299_189039343	0.0193933	HOX{A6,A7,B6,B7}.p2	AY747687|Spata17|74717|spermatogenesis associated 17	BC089520|Spata17|74717|spermatogenesis associated 17	AK050925|Spata17|74717|spermatogenesis associated 17	NM_028848|Spata17|74717|spermatogenesis associated 17	NM_029067|Spata17|74717|spermatogenesis associated 17
mm9_v1_chr11_+_102295463_102295502	0.0193816	HOX{A6,A7,B6,B7}.p2	AK193719|Grn|14824|granulin	AK219696|Grn|14824|granulin	AK211032|Grn|14824|granulin
mm9_v1_chr11_-_69509220_69509255	0.0193336	HOX{A6,A7,B6,B7}.p2	AF030100|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr8_-_107813357_107813427	0.019299	HOX{A6,A7,B6,B7}.p2	BC059045|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	AK049007|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	NM_001166394|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	NM_028888|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene
mm9_v1_chr11_+_20991321_20991416	0.019221	HOX{A6,A7,B6,B7}.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr1_-_9289810_9289957	0.019191	HOX{A6,A7,B6,B7}.p2	NM_027671|Sntg1|71096|syntrophin, gamma 1	AK038698|Sntg1|71096|syntrophin, gamma 1
mm9_v1_chr1_+_74331503_74331655	0.0191738	HOX{A6,A7,B6,B7}.p2	AF318058|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116236|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116237|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_001039509|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_025580|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC008274|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC058945|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK012976|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK173125|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK009545|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY039041|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY299972|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK166548|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr9_+_124036265_124036352	0.0189906	HOX{A6,A7,B6,B7}.p2	AK154595|Ccr5|12774|chemokine (C-C motif) receptor 5	NM_009917|Ccr5|12774|chemokine (C-C motif) receptor 5	AK141906|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155632|Ccr5|12774|chemokine (C-C motif) receptor 5	AK170303|Ccr5|12774|chemokine (C-C motif) receptor 5	D83648|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155628|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155867|Ccr5|12774|chemokine (C-C motif) receptor 5	X94151|Ccr5|12774|chemokine (C-C motif) receptor 5	BC105643|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103574|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103586|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103587|Ccr5|12774|chemokine (C-C motif) receptor 5	U47036|Ccr5|12774|chemokine (C-C motif) receptor 5
mm9_v1_chr9_-_78290953_78291043	0.0189263	HOX{A6,A7,B6,B7}.p2	BC052196|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	NM_173386|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK078662|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK054330|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK145268|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK154165|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145651|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145653|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK030292|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene
mm9_v1_chr15_+_80541675_80541764	0.0188886	HOX{A6,A7,B6,B7}.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr16_-_20734583_20734583	0.0188255	HOX{A6,A7,B6,B7}.p2	AK047512|Thpo|21832|thrombopoietin	NM_009379|Thpo|21832|thrombopoietin
mm9_v1_chr17_-_74242984_74243003	0.0187137	HOX{A6,A7,B6,B7}.p2	BC003997|Xdh|22436|xanthine dehydrogenase
mm9_v1_chr12_-_81269174_81269180	0.0186853	HOX{A6,A7,B6,B7}.p2	AK037382|Actn1|109711|actinin, alpha 1
mm9_v1_chr3_-_129534201_129534313	0.0186317	HOX{A6,A7,B6,B7}.p2	BC021873|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	BC048685|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	NM_026578|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr1_-_37921651_37921692	0.0186207	HOX{A6,A7,B6,B7}.p2	AK170053|Tsga10|211484|testis specific 10
mm9_v1_chr1_-_78485413_78485452	0.0186158	HOX{A6,A7,B6,B7}.p2	AK168923|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK045432|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	NM_011811|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	BC002313|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK076607|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK134799|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK010271|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK012154|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK165645|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK167945|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK169621|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	BC016428|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit
mm9_v1_chr5_+_121996013_121996031	0.0185842	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_-_47212695_47212783	0.0184908	HOX{A6,A7,B6,B7}.p2	BC019197|Calhm2|72691|calcium homeostasis modulator 2	AK012923|Calhm2|72691|calcium homeostasis modulator 2	AK170068|Calhm2|72691|calcium homeostasis modulator 2	AK036961|Calhm2|72691|calcium homeostasis modulator 2	BC096564|Calhm2|72691|calcium homeostasis modulator 2	AK040739|Calhm2|72691|calcium homeostasis modulator 2	AK089278|Calhm2|72691|calcium homeostasis modulator 2	NM_133746|Calhm2|72691|calcium homeostasis modulator 2
mm9_v1_chr6_-_51962458_51962567	0.0184347	HOX{A6,A7,B6,B7}.p2	AF051324|Skap2|54353|src family associated phosphoprotein 2	AB014485|Skap2|54353|src family associated phosphoprotein 2	AK144289|Skap2|54353|src family associated phosphoprotein 2	AK076000|Skap2|54353|src family associated phosphoprotein 2	AK172297|Skap2|54353|src family associated phosphoprotein 2	BC003711|Skap2|54353|src family associated phosphoprotein 2	NM_018773|Skap2|54353|src family associated phosphoprotein 2
mm9_v1_chr2_+_69560922_69560938	0.0184174	HOX{A6,A7,B6,B7}.p2	AK088007|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr11_+_75007475_75007498	0.0184124	HOX{A6,A7,B6,B7}.p2	AK140456|Rtn4rl1|237847|reticulon 4 receptor-like 1	NM_177708|Rtn4rl1|237847|reticulon 4 receptor-like 1	AK033286|Rtn4rl1|237847|reticulon 4 receptor-like 1
mm9_v1_chr15_+_38908403_38908501	0.0182759	HOX{A6,A7,B6,B7}.p2	AK090258|Cthrc1|68588|collagen triple helix repeat containing 1	AK076498|Cthrc1|68588|collagen triple helix repeat containing 1	AK151282|Cthrc1|68588|collagen triple helix repeat containing 1	NM_026778|Cthrc1|68588|collagen triple helix repeat containing 1	AK003674|Cthrc1|68588|collagen triple helix repeat containing 1	BC131907|Cthrc1|68588|collagen triple helix repeat containing 1	BC144745|Cthrc1|68588|collagen triple helix repeat containing 1
mm9_v1_chr3_-_30498769_30498835	0.0182327	HOX{A6,A7,B6,B7}.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr7_-_133819870_133819892	0.0181895	HOX{A6,A7,B6,B7}.p2	BC005413|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	NM_133670|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	L02331|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	AK002700|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1
mm9_v1_chr16_+_17045284_17045304	0.0181557	HOX{A6,A7,B6,B7}.p2	AK018549|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr4_+_123613778_123613862	0.0181463	HOX{A6,A7,B6,B7}.p2	AK003876|Rragc|54170|Ras-related GTP binding C	AK196968|Rragc|54170|Ras-related GTP binding C	AK177349|Rragc|54170|Ras-related GTP binding C	AK196201|Rragc|54170|Ras-related GTP binding C	AK204008|Rragc|54170|Ras-related GTP binding C	AK213206|Rragc|54170|Ras-related GTP binding C
mm9_v1_chr11_+_97888023_97888023	0.0181004	HOX{A6,A7,B6,B7}.p2	NM_001159483|Rpl19|19921|ribosomal protein L19
mm9_v1_chr8_+_87213209_87213224	0.0180765	HOX{A6,A7,B6,B7}.p2	AK032945|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr10_+_19868725_19868819	0.0180611	HOX{A6,A7,B6,B7}.p2	NM_001198635|Mtap7|17761|microtubule-associated protein 7	NM_008635|Mtap7|17761|microtubule-associated protein 7	BC052637|Mtap7|17761|microtubule-associated protein 7	BC042771|Mtap7|17761|microtubule-associated protein 7	BC044733|Mtap7|17761|microtubule-associated protein 7	BC046555|Mtap7|17761|microtubule-associated protein 7	AK008182|Mtap7|17761|microtubule-associated protein 7	AK014575|Mtap7|17761|microtubule-associated protein 7	AB098611|Mtap7|17761|microtubule-associated protein 7	Y15197|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr4_-_108251718_108251734	0.0179549	HOX{A6,A7,B6,B7}.p2	CT010186|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm9_v1_chr12_-_113749363_113749407	0.0179387	HOX{A6,A7,B6,B7}.p2	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr9_+_63450444_63450525	0.0178569	HOX{A6,A7,B6,B7}.p2	AK159897|Aagab|66939|alpha- and gamma-adaptin binding protein	NM_025857|Aagab|66939|alpha- and gamma-adaptin binding protein	BC027311|Aagab|66939|alpha- and gamma-adaptin binding protein	AK017714|Aagab|66939|alpha- and gamma-adaptin binding protein
mm9_v1_chrX_+_150158113_150158178	0.0178418	HOX{A6,A7,B6,B7}.p2	AK008724|2210013O21Rik|70123|RIKEN cDNA 2210013O21 gene
mm9_v1_chr18_+_75165496_75165648	0.0178282	HOX{A6,A7,B6,B7}.p2	AK077642|BC031181|407819|cDNA sequence BC031181	BC016084|BC031181|407819|cDNA sequence BC031181	NM_001001181|BC031181|407819|cDNA sequence BC031181	AK131658|BC031181|407819|cDNA sequence BC031181	BC031181|BC031181|407819|cDNA sequence BC031181	BC027819|BC031181|407819|cDNA sequence BC031181	AK180483|BC031181|407819|cDNA sequence BC031181	AK187367|BC031181|407819|cDNA sequence BC031181
mm9_v1_chr4_-_117852224_117852281	0.0178274	HOX{A6,A7,B6,B7}.p2	AK129187|Kdm4a|230674|lysine (K)-specific demethylase 4A
mm9_v1_chr4_-_43441988_43442007	0.0178257	HOX{A6,A7,B6,B7}.p2	BC172030|Fam166b|329831|family with sequence similarity 166, member B	AK029435|Fam166b|329831|family with sequence similarity 166, member B	AK053208|Fam166b|329831|family with sequence similarity 166, member B	NM_001162381|Fam166b|329831|family with sequence similarity 166, member B	NM_177377|Fam166b|329831|family with sequence similarity 166, member B
mm9_v1_chr11_+_49933305_49933398	0.0177901	HOX{A6,A7,B6,B7}.p2	BC038527|LOC552912|552912|hypothetical LOC552912
mm9_v1_chr2_-_5765967_5766039	0.0177577	HOX{A6,A7,B6,B7}.p2	BC019753|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC023821|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK141463|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK161246|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC024787|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC022972|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK090122|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	NM_133837|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK159208|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)
mm9_v1_chr19_-_6015125_6015246	0.017699	HOX{A6,A7,B6,B7}.p2	AF021847|Capn1|12333|calpain 1	BC026138|Capn1|12333|calpain 1	BC050276|Capn1|12333|calpain 1	AK088547|Capn1|12333|calpain 1	AK149706|Capn1|12333|calpain 1	AK150084|Capn1|12333|calpain 1	AK168063|Capn1|12333|calpain 1	AK160940|Capn1|12333|calpain 1	AK165258|Capn1|12333|calpain 1	NM_007600|Capn1|12333|calpain 1
mm9_v1_chr7_+_116077911_116077933	0.0175937	HOX{A6,A7,B6,B7}.p2	AK152037|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	NM_025344|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK002778|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK003372|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK088537|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK136797|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK010333|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr18_-_42434831_42434856	0.0175575	HOX{A6,A7,B6,B7}.p2	AK018420|8430416G17Rik|71469|RIKEN cDNA 8430416G17 gene	BC038171|8430416G17Rik|71469|RIKEN cDNA 8430416G17 gene
mm9_v1_chr6_+_43215604_43215702	0.0174683	HOX{A6,A7,B6,B7}.p2	NM_133674|Arhgef5|54324|Rho guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr12_-_81861527_81861701	0.0173505	HOX{A6,A7,B6,B7}.p2	AK147473|Gm1568|380768|predicted gene 1568	BC067044|Gm1568|380768|predicted gene 1568	NM_001008423|Gm1568|380768|predicted gene 1568
mm9_v1_chr3_+_123149830_123150053	0.0173311	HOX{A6,A7,B6,B7}.p2	D89871|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	NM_008939|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	BC031429|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	AK132633|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	Y13192|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)
mm9_v1_chr6_+_81991613_81991706	0.0172701	HOX{A6,A7,B6,B7}.p2	AK145140|Fam176a|232146|family with sequence similarity 176, member A	NM_145570|Fam176a|232146|family with sequence similarity 176, member A	BC027150|Fam176a|232146|family with sequence similarity 176, member A	AK166504|Fam176a|232146|family with sequence similarity 176, member A	BC014699|Fam176a|232146|family with sequence similarity 176, member A
mm9_v1_chr4_-_116480186_116480196	0.0172558	HOX{A6,A7,B6,B7}.p2	AK046576|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr17_-_26056379_26056705	0.017249	HOX{A6,A7,B6,B7}.p2	AB232639|Rab40c|224624|Rab40c, member RAS oncogene family	AF422144|Rab40c|224624|Rab40c, member RAS oncogene family	BC037461|Rab40c|224624|Rab40c, member RAS oncogene family	BC027008|Rab40c|224624|Rab40c, member RAS oncogene family	NM_139154|Rab40c|224624|Rab40c, member RAS oncogene family
mm9_v1_chr3_+_90280032_90280140	0.0170697	HOX{A6,A7,B6,B7}.p2	AK135449|Ilf2|67781|interleukin enhancer binding factor 2	AK161127|Ilf2|67781|interleukin enhancer binding factor 2	AK031892|Ilf2|67781|interleukin enhancer binding factor 2	AK157129|Ilf2|67781|interleukin enhancer binding factor 2	AK013858|Ilf2|67781|interleukin enhancer binding factor 2	AK044885|Ilf2|67781|interleukin enhancer binding factor 2	AK161126|Ilf2|67781|interleukin enhancer binding factor 2	BC024718|Ilf2|67781|interleukin enhancer binding factor 2	NM_026374|Ilf2|67781|interleukin enhancer binding factor 2	AK012364|Ilf2|67781|interleukin enhancer binding factor 2	AK078003|Ilf2|67781|interleukin enhancer binding factor 2	AK135539|Ilf2|67781|interleukin enhancer binding factor 2
mm9_v1_chr6_-_122692754_122692762	0.0169367	HOX{A6,A7,B6,B7}.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr17_-_35653683_35653815	0.0168164	HOX{A6,A7,B6,B7}.p2	S53376|Tcf19|106795|transcription factor 19	BC004617|Tcf19|106795|transcription factor 19	AK078697|Tcf19|106795|transcription factor 19	AK088479|Tcf19|106795|transcription factor 19	AK077414|Tcf19|106795|transcription factor 19	NM_001163763|Tcf19|106795|transcription factor 19	NM_001163764|Tcf19|106795|transcription factor 19	NM_025674|Tcf19|106795|transcription factor 19
mm9_v1_chrX_+_20427050_20427089	0.0168146	HOX{A6,A7,B6,B7}.p2	AB158252|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr5_-_23929347_23929348	0.0167724	HOX{A6,A7,B6,B7}.p2	AK051790|Cdk5|12568|cyclin-dependent kinase 5	NM_007668|Cdk5|12568|cyclin-dependent kinase 5
mm9_v1_chr9_-_92436892_92436949	0.0167211	HOX{A6,A7,B6,B7}.p2	AK021297|B430319G15Rik|78575|RIKEN cDNA B430319G15 gene
mm9_v1_chr8_-_118230828_118230997	0.0167195	HOX{A6,A7,B6,B7}.p2	AK151738|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	AK152074|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr17_+_15080256_15080312	0.0166875	HOX{A6,A7,B6,B7}.p2	BC054359|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK017276|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK018298|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK076476|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	BC071250|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	BC027313|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK197792|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK213665|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK214640|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK218850|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene
mm9_v1_chr17_+_27110101_27110235	0.0166714	HOX{A6,A7,B6,B7}.p2	BC049933|Zbtb9|474156|zinc finger and BTB domain containing 9	NM_001005916|Zbtb9|474156|zinc finger and BTB domain containing 9	AK154850|Zbtb9|474156|zinc finger and BTB domain containing 9	AK030262|Zbtb9|474156|zinc finger and BTB domain containing 9
mm9_v1_chr4_+_43591606_43591606	0.016657	HOX{A6,A7,B6,B7}.p2	NM_172866|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)
mm9_v1_chrX_+_34335651_34335798	0.0166324	HOX{A6,A7,B6,B7}.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr3_+_106904470_106904486	0.016605	HOX{A6,A7,B6,B7}.p2	AK044342|Kcna2|16490|potassium voltage-gated channel, shaker-related subfamily, member 2	NM_008417|Kcna2|16490|potassium voltage-gated channel, shaker-related subfamily, member 2
mm9_v1_chr9_-_51771451_51771665	0.0165839	HOX{A6,A7,B6,B7}.p2	BC099518|Fdx1|14148|ferredoxin 1	BC132173|Fdx1|14148|ferredoxin 1	BC132175|Fdx1|14148|ferredoxin 1	D43690|Fdx1|14148|ferredoxin 1	D43689|Fdx1|14148|ferredoxin 1	NM_007996|Fdx1|14148|ferredoxin 1	L29123|Fdx1|14148|ferredoxin 1	AK004879|Fdx1|14148|ferredoxin 1	AK148115|Fdx1|14148|ferredoxin 1
mm9_v1_chr19_+_5637459_5637550	0.0165287	HOX{A6,A7,B6,B7}.p2	AK155321|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK158072|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	BC094053|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	NM_009045|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr18_+_84257471_84257589	0.016462	HOX{A6,A7,B6,B7}.p2	AK083082|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	AK047559|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	AK081988|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	BC116427|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	BC116428|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	NM_146090|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2
mm9_v1_chr9_-_31019392_31019409	0.0163012	HOX{A6,A7,B6,B7}.p2	AK013376|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	Z27070|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK149977|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK150020|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK087459|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK160471|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	NM_001102455|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	NM_001102456|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	NM_009691|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	Z22592|Aplp2|11804|amyloid beta (A4) precursor-like protein 2
mm9_v1_chr15_+_102865094_102865153	0.0162979	HOX{A6,A7,B6,B7}.p2	D11329|Hoxc4|15423|homeobox C4	AB221549|Hoxc4|15423|homeobox C4
mm9_v1_chr10_+_7499982_7500066	0.0162213	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_133843746_133843812	0.0161234	HOX{A6,A7,B6,B7}.p2	BC058514|Pdik1l|230809|PDLIM1 interacting kinase 1 like	NM_146156|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK164975|Pdik1l|230809|PDLIM1 interacting kinase 1 like
mm9_v1_chr16_+_23127862_23127891	0.0160943	HOX{A6,A7,B6,B7}.p2	AK018147|6330408M09Rik|70749|RIKEN cDNA 6330408M09 gene	AK135589|6330408M09Rik|70749|RIKEN cDNA 6330408M09 gene
mm9_v1_chr11_-_120486280_120486339	0.0160726	HOX{A6,A7,B6,B7}.p2	BC026403|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC040759|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026637|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026650|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AY251540|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK051725|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK135484|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	NM_153056|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)
mm9_v1_chr6_+_55018048_55018055	0.0158793	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_-_98608556_98608580	0.015773	HOX{A6,A7,B6,B7}.p2	BC114969|Wnt10b|22410|wingless related MMTV integration site 10b	AK029284|Wnt10b|22410|wingless related MMTV integration site 10b	NM_011718|Wnt10b|22410|wingless related MMTV integration site 10b	U30464|Wnt10b|22410|wingless related MMTV integration site 10b
mm9_v1_chr7_+_3596827_3596852	0.0155791	HOX{A6,A7,B6,B7}.p2	AK046141|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr13_-_41454358_41454379	0.0155255	HOX{A6,A7,B6,B7}.p2	AK054179|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK033729|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_017464|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr8_+_74147980_74148065	0.0154799	HOX{A6,A7,B6,B7}.p2	AK183495|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK202365|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr5_+_151755181_151755278	0.015375	HOX{A6,A7,B6,B7}.p2	BC138258|Kl|16591|klotho	BC138259|Kl|16591|klotho	NM_013823|Kl|16591|klotho	AB005141|Kl|16591|klotho	AB010088|Kl|16591|klotho
mm9_v1_chr2_-_22895580_22895680	0.0152852	HOX{A6,A7,B6,B7}.p2	AY033645|Abi1|11308|abl-interactor 1	AK152061|Abi1|11308|abl-interactor 1	AK152184|Abi1|11308|abl-interactor 1	AK034476|Abi1|11308|abl-interactor 1	BC079642|Abi1|11308|abl-interactor 1	AK151026|Abi1|11308|abl-interactor 1	AK153130|Abi1|11308|abl-interactor 1	AK164040|Abi1|11308|abl-interactor 1
mm9_v1_chr3_+_95087357_95087526	0.0152187	HOX{A6,A7,B6,B7}.p2	AK179473|Fam63a|75007|family with sequence similarity 63, member A	AK213538|Fam63a|75007|family with sequence similarity 63, member A	AK213681|Fam63a|75007|family with sequence similarity 63, member A	AK215508|Fam63a|75007|family with sequence similarity 63, member A	AK218735|Fam63a|75007|family with sequence similarity 63, member A	AK195238|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr5_-_133018212_133018273	0.0150427	HOX{A6,A7,B6,B7}.p2	BC096021|Auts2|319974|autism susceptibility candidate 2	NM_177047|Auts2|319974|autism susceptibility candidate 2	BC151031|Auts2|319974|autism susceptibility candidate 2	BC151047|Auts2|319974|autism susceptibility candidate 2	AK052418|Auts2|319974|autism susceptibility candidate 2
mm9_v1_chr5_+_106128934_106129078	0.0150238	HOX{A6,A7,B6,B7}.p2	AK137459|Lrrc8d|231549|leucine rich repeat containing 8D	NM_001122768|Lrrc8d|231549|leucine rich repeat containing 8D	AK046249|Lrrc8d|231549|leucine rich repeat containing 8D	AK080722|Lrrc8d|231549|leucine rich repeat containing 8D
mm9_v1_chr18_-_46901117_46901234	0.0149848	HOX{A6,A7,B6,B7}.p2	BC070470|Atg12|67526|autophagy-related 12 (yeast)	AB066216|Atg12|67526|autophagy-related 12 (yeast)	AK167027|Atg12|67526|autophagy-related 12 (yeast)	AK008698|Atg12|67526|autophagy-related 12 (yeast)	AK016474|Atg12|67526|autophagy-related 12 (yeast)	AK039278|Atg12|67526|autophagy-related 12 (yeast)	AK039546|Atg12|67526|autophagy-related 12 (yeast)	AK005405|Atg12|67526|autophagy-related 12 (yeast)	NM_026217|Atg12|67526|autophagy-related 12 (yeast)
mm9_v1_chr2_-_87552060_87552060	0.0149753	HOX{A6,A7,B6,B7}.p2	NM_001011833|Olfr1137|258101|olfactory receptor 1137
mm9_v1_chr7_-_86611065_86611158	0.0148864	HOX{A6,A7,B6,B7}.p2	BC080291|Polg|18975|polymerase (DNA directed), gamma	BC061472|Polg|18975|polymerase (DNA directed), gamma	AK135341|Polg|18975|polymerase (DNA directed), gamma	U53584|Polg|18975|polymerase (DNA directed), gamma	AK133584|Polg|18975|polymerase (DNA directed), gamma	BC053024|Polg|18975|polymerase (DNA directed), gamma	AK148091|Polg|18975|polymerase (DNA directed), gamma	NM_017462|Polg|18975|polymerase (DNA directed), gamma
mm9_v1_chr18_+_77168765_77168895	0.0148174	HOX{A6,A7,B6,B7}.p2	NM_025409|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK004281|Ier3ip1|66191|immediate early response 3 interacting protein 1	BC021512|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007388|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007862|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK009116|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK182132|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK190140|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK210106|Ier3ip1|66191|immediate early response 3 interacting protein 1
mm9_v1_chr12_+_79849918_79849954	0.014753	HOX{A6,A7,B6,B7}.p2	NM_019579|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr11_-_3997116_3997172	0.0147047	HOX{A6,A7,B6,B7}.p2	AK008068|Sec14l2|67815|SEC14-like 2 (S. cerevisiae)
mm9_v1_chr14_-_70204956_70205151	0.0146508	HOX{A6,A7,B6,B7}.p2	BC056954|Rhobtb2|246710|Rho-related BTB domain containing 2	AK037927|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr7_+_52084044_52084057	0.0145622	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_35083720_35083747	0.0144568	HOX{A6,A7,B6,B7}.p2	AK165997|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK075887|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164411|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164412|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164413|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164414|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_016877|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr8_+_59029896_59029998	0.0144378	HOX{A6,A7,B6,B7}.p2	AK077595|Fbxo8|50753|F-box protein 8	AK078111|Fbxo8|50753|F-box protein 8	AK012401|Fbxo8|50753|F-box protein 8	AK147748|Fbxo8|50753|F-box protein 8	AK162592|Fbxo8|50753|F-box protein 8	AK002538|Fbxo8|50753|F-box protein 8	BC011100|Fbxo8|50753|F-box protein 8	AF176527|Fbxo8|50753|F-box protein 8	AK029989|Fbxo8|50753|F-box protein 8	NM_015791|Fbxo8|50753|F-box protein 8	AK160145|Fbxo8|50753|F-box protein 8	BC034854|Fbxo8|50753|F-box protein 8
mm9_v1_chr7_-_109082300_109082407	0.0143679	HOX{A6,A7,B6,B7}.p2	AK005758|Lrrc51|69358|leucine rich repeat containing 51	NM_001162973|Lrrc51|69358|leucine rich repeat containing 51	NM_027053|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr2_+_121782185_121782265	0.014327	HOX{A6,A7,B6,B7}.p2	AK033382|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	NM_212450|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK169248|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK044805|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK053513|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC066219|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK030085|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK041422|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK049463|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK160431|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC052660|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr19_+_37282150_37282364	0.0143057	HOX{A6,A7,B6,B7}.p2	AK007511|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132455|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132457|March5|69104|membrane-associated ring finger (C3HC4) 5	BC064752|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107215|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107214|March5|69104|membrane-associated ring finger (C3HC4) 5
mm9_v1_chr3_-_107135939_107136206	0.0142983	HOX{A6,A7,B6,B7}.p2	BC080828|Rbm15|229700|RNA binding motif protein 15	AK048987|Rbm15|229700|RNA binding motif protein 15	BC051409|Rbm15|229700|RNA binding motif protein 15	AK168242|Rbm15|229700|RNA binding motif protein 15	AK166271|Rbm15|229700|RNA binding motif protein 15	BC057038|Rbm15|229700|RNA binding motif protein 15	AK220162|Rbm15|229700|RNA binding motif protein 15	AK168936|Rbm15|229700|RNA binding motif protein 15	BC120590|Rbm15|229700|RNA binding motif protein 15	BC137741|Rbm15|229700|RNA binding motif protein 15	NM_001045807|Rbm15|229700|RNA binding motif protein 15
mm9_v1_chr13_+_59686602_59686637	0.0142941	HOX{A6,A7,B6,B7}.p2	AK021042|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr4_-_149112082_149112163	0.0142843	HOX{A6,A7,B6,B7}.p2	AK079157|Tmem201|230917|transmembrane protein 201	AK078532|Tmem201|230917|transmembrane protein 201	AK039221|Tmem201|230917|transmembrane protein 201	BC072645|Tmem201|230917|transmembrane protein 201	NM_001025106|Tmem201|230917|transmembrane protein 201	NM_177672|Tmem201|230917|transmembrane protein 201	AK086543|Tmem201|230917|transmembrane protein 201	AK153631|Tmem201|230917|transmembrane protein 201
mm9_v1_chr8_-_26059258_26059275	0.0141948	HOX{A6,A7,B6,B7}.p2	AF513715|Adam32|353188|a disintegrin and metallopeptidase domain 32	AK005759|Adam32|353188|a disintegrin and metallopeptidase domain 32	BC060983|Adam32|353188|a disintegrin and metallopeptidase domain 32	AK131749|Adam32|353188|a disintegrin and metallopeptidase domain 32	NM_153397|Adam32|353188|a disintegrin and metallopeptidase domain 32
mm9_v1_chr9_+_57369044_57369118	0.0138061	HOX{A6,A7,B6,B7}.p2	BC003831|Cox5a|12858|cytochrome c oxidase, subunit Va	BC034302|Cox5a|12858|cytochrome c oxidase, subunit Va	AK018723|Cox5a|12858|cytochrome c oxidase, subunit Va	X15963|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr14_-_52640348_52640407	0.0138029	HOX{A6,A7,B6,B7}.p2	BC096486|Zfp219|69890|zinc finger protein 219	AB063578|Zfp219|69890|zinc finger protein 219	NM_027248|Zfp219|69890|zinc finger protein 219
mm9_v1_chr12_+_73542852_73542935	0.0137441	HOX{A6,A7,B6,B7}.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr11_-_69495203_69495445	0.0136675	HOX{A6,A7,B6,B7}.p2	AY008764|Senp3|80886|SUMO/sentrin specific peptidase 3	BC037014|Senp3|80886|SUMO/sentrin specific peptidase 3	AK045071|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr6_-_54767627_54767644	0.0136608	HOX{A6,A7,B6,B7}.p2	AK011926|2610209C05Rik|70449|RIKEN cDNA 2610209C05 gene
mm9_v1_chr2_-_109120880_109120906	0.0136115	HOX{A6,A7,B6,B7}.p2	AK148431|Mett5d1|76894|methyltransferase 5 domain containing 1
mm9_v1_chr12_+_111976121_111976196	0.0136032	HOX{A6,A7,B6,B7}.p2	NM_027149|Wdr20a|69641|WD repeat domain 20A
mm9_v1_chr3_-_97672147_97672234	0.0135527	HOX{A6,A7,B6,B7}.p2	AK141917|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_177145|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr5_-_124637176_124637203	0.013545	HOX{A6,A7,B6,B7}.p2	AK129364|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2	BC070452|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chr11_+_98273797_98273840	0.0135062	HOX{A6,A7,B6,B7}.p2	NM_001003817|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK142296|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC046811|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC053078|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK129487|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr8_-_113370626_113370708	0.0134794	HOX{A6,A7,B6,B7}.p2	BC042580|Sf3b3|101943|splicing factor 3b, subunit 3	AK209554|Sf3b3|101943|splicing factor 3b, subunit 3	BC011412|Sf3b3|101943|splicing factor 3b, subunit 3	AK017529|Sf3b3|101943|splicing factor 3b, subunit 3	AK040625|Sf3b3|101943|splicing factor 3b, subunit 3	AK088268|Sf3b3|101943|splicing factor 3b, subunit 3	AK046845|Sf3b3|101943|splicing factor 3b, subunit 3	AK128988|Sf3b3|101943|splicing factor 3b, subunit 3	AK147914|Sf3b3|101943|splicing factor 3b, subunit 3	AK164199|Sf3b3|101943|splicing factor 3b, subunit 3	NM_133953|Sf3b3|101943|splicing factor 3b, subunit 3
mm9_v1_chr2_-_155937440_155937537	0.013466	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_113761344_113761496	0.0133566	HOX{A6,A7,B6,B7}.p2	AK164854|Dsel|319901|dermatan sulfate epimerase-like	AK033983|Dsel|319901|dermatan sulfate epimerase-like	NM_001081316|Dsel|319901|dermatan sulfate epimerase-like
mm9_v1_chr4_+_125181288_125181474	0.0132171	HOX{A6,A7,B6,B7}.p2	NM_008049|Ftl2|14337|ferritin light chain 2	AK145265|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC106145|Ftl1|14325|ferritin light chain 1	BC150761|Ftl2|14337|ferritin light chain 2	S89400|Ftl2|14337|ferritin light chain 2
mm9_v1_chr5_-_86539474_86539529	0.0131713	HOX{A6,A7,B6,B7}.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr3_-_117571789_117571835	0.013169	HOX{A6,A7,B6,B7}.p2	AK170966|Snx7|76561|sorting nexin 7	AK052487|Snx7|76561|sorting nexin 7	AK011015|Snx7|76561|sorting nexin 7
mm9_v1_chr4_+_135750199_135750281	0.0131597	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_3515373_3515441	0.0131553	HOX{A6,A7,B6,B7}.p2	AF173829|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_001122818|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_015801|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK040720|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC054789|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC056999|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr1_+_129999868_129999934	0.0130085	HOX{A6,A7,B6,B7}.p2	AK144098|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	NM_181750|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK141150|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	BC049181|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK051765|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)
mm9_v1_chr13_-_115892166_115892179	0.0129607	HOX{A6,A7,B6,B7}.p2	AK035870|Itga1|109700|integrin alpha 1	NM_001033228|Itga1|109700|integrin alpha 1
mm9_v1_chr5_+_136363769_136363791	0.0129394	HOX{A6,A7,B6,B7}.p2	NM_013560|Hspb1|15507|heat shock protein 1
mm9_v1_chr10_-_55948481_55948530	0.0129149	HOX{A6,A7,B6,B7}.p2	NM_001033385|D630037F22Rik|544696|RIKEN cDNA D630037F22 gene
mm9_v1_chr2_+_103867951_103868054	0.0128548	HOX{A6,A7,B6,B7}.p2	NM_020593|Fbxo3|57443|F-box protein 3	NM_212433|Fbxo3|57443|F-box protein 3	AK028048|Fbxo3|57443|F-box protein 3	AK031428|Fbxo3|57443|F-box protein 3	AK049870|Fbxo3|57443|F-box protein 3	BC058253|Fbxo3|57443|F-box protein 3	AK085686|Fbxo3|57443|F-box protein 3	BC050758|Fbxo3|57443|F-box protein 3	AK004544|Fbxo3|57443|F-box protein 3	AK050195|Fbxo3|57443|F-box protein 3	AK150097|Fbxo3|57443|F-box protein 3	AK151130|Fbxo3|57443|F-box protein 3	AK151857|Fbxo3|57443|F-box protein 3	AK152780|Fbxo3|57443|F-box protein 3	AK207976|Fbxo3|57443|F-box protein 3	AK215292|Fbxo3|57443|F-box protein 3	AK215501|Fbxo3|57443|F-box protein 3	AF233226|Fbxo3|57443|F-box protein 3	AK019550|Fbxo3|57443|F-box protein 3	AK031185|Fbxo3|57443|F-box protein 3	AK009024|Fbxo3|57443|F-box protein 3	AK167075|Fbxo3|57443|F-box protein 3	BC010212|Fbxo3|57443|F-box protein 3
mm9_v1_chr17_-_46281016_46281172	0.012852	HOX{A6,A7,B6,B7}.p2	AK165820|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	BC019423|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	AK006440|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	NM_029338|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)
mm9_v1_chr15_-_34372832_34373030	0.0128078	HOX{A6,A7,B6,B7}.p2	BC092137|Rpl30|19946|ribosomal protein L30	BC069949|Rpl30|19946|ribosomal protein L30	BC086890|Rpl30|19946|ribosomal protein L30	AK002988|Rpl30|19946|ribosomal protein L30	AK137031|Rpl30|19946|ribosomal protein L30	BC086891|Rpl30|19946|ribosomal protein L30	BC100608|Rpl30|19946|ribosomal protein L30	NM_009083|Rpl30|19946|ribosomal protein L30	NM_001163485|Rpl30|19946|ribosomal protein L30
mm9_v1_chr8_+_74446723_74446817	0.0126978	HOX{A6,A7,B6,B7}.p2	NM_133358|Zfp617|170938|zinc finger protein 617	AK143880|Zfp617|170938|zinc finger protein 617	AB020542|Zfp617|170938|zinc finger protein 617	AK146644|Zfp617|170938|zinc finger protein 617	BC014712|Zfp617|170938|zinc finger protein 617
mm9_v1_chr14_+_31362306_31362551	0.0125586	HOX{A6,A7,B6,B7}.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chrX_+_97710893_97711108	0.0125197	HOX{A6,A7,B6,B7}.p2	AK218313|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK210875|Igbp1|18518|immunoglobulin (CD79A) binding protein 1
mm9_v1_chr4_+_155068566_155068580	0.0124843	HOX{A6,A7,B6,B7}.p2	AK047240|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene	NM_178699|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene
mm9_v1_chr4_+_148478238_148478288	0.0124657	HOX{A6,A7,B6,B7}.p2	AK039227|Dffa|13347|DNA fragmentation factor, alpha subunit	NM_001025296|Dffa|13347|DNA fragmentation factor, alpha subunit	NM_010044|Dffa|13347|DNA fragmentation factor, alpha subunit	AK154488|Dffa|13347|DNA fragmentation factor, alpha subunit
mm9_v1_chr19_+_46227029_46227030	0.0124265	HOX{A6,A7,B6,B7}.p2	AK039570|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr6_-_83059000_83059052	0.0124265	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_72258684_72258880	0.0124236	HOX{A6,A7,B6,B7}.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr8_-_13890244_13890296	0.012348	HOX{A6,A7,B6,B7}.p2	BC029192|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK010573|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK008882|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	NM_025556|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene
mm9_v1_chr12_-_110098804_110098955	0.0123354	HOX{A6,A7,B6,B7}.p2	AK185973|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr7_+_130267398_130267398	0.012328	HOX{A6,A7,B6,B7}.p2	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr6_-_113291897_113291906	0.0123262	HOX{A6,A7,B6,B7}.p2	AK205870|Camk1|52163|calcium/calmodulin-dependent protein kinase I
mm9_v1_chr4_+_45354940_45354977	0.0121997	HOX{A6,A7,B6,B7}.p2	AK170534|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK165246|Dcaf10|242418|DDB1 and CUL4 associated factor 10	NM_153167|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr7_-_20284500_20284543	0.0121814	HOX{A6,A7,B6,B7}.p2	NM_009696|Apoe|11816|apolipoprotein E
mm9_v1_chr4_+_107838038_107838132	0.0121129	HOX{A6,A7,B6,B7}.p2	AK153878|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2	AK166388|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2	NM_026728|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2	AK011365|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2	BC025104|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2	AK005030|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2	AK166965|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2
mm9_v1_chr7_+_134628622_134628734	0.0119952	HOX{A6,A7,B6,B7}.p2	NM_010183|Fbrs|14123|fibrosin
mm9_v1_chr7_-_52965801_52965838	0.0119707	HOX{A6,A7,B6,B7}.p2	AK198375|Sphk2|56632|sphingosine kinase 2	AK202851|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr15_+_81767370_81767389	0.011912	HOX{A6,A7,B6,B7}.p2	BC016109|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr11_+_98273930_98273964	0.0119084	HOX{A6,A7,B6,B7}.p2	AK031099|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK083669|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr8_-_122346577_122346634	0.0119075	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_125676823_125676868	0.0118892	HOX{A6,A7,B6,B7}.p2	AF098949|Coq7|12850|demethyl-Q 7	NM_009940|Coq7|12850|demethyl-Q 7
mm9_v1_chr13_+_59686693_59686787	0.0117862	HOX{A6,A7,B6,B7}.p2	NM_030153|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC027201|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	AY102701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC043701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC056435|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr5_-_151468105_151468189	0.0117374	HOX{A6,A7,B6,B7}.p2	AK038740|N4bp2l2|381695|NEDD4 binding protein 2-like 2	BC037393|N4bp2l2|381695|NEDD4 binding protein 2-like 2	NM_201369|N4bp2l2|381695|NEDD4 binding protein 2-like 2
mm9_v1_chr17_+_29628249_29628310	0.0116941	HOX{A6,A7,B6,B7}.p2	AK154669|Pim1|18712|proviral integration site 1
mm9_v1_chr4_+_42962733_42962813	0.0116817	HOX{A6,A7,B6,B7}.p2	AK158535|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5	AF321322|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5
mm9_v1_chr6_-_51413182_51413233	0.0116783	HOX{A6,A7,B6,B7}.p2	AK049735|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr7_-_112706892_112707045	0.0116556	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_+_16510156_16510251	0.0115845	HOX{A6,A7,B6,B7}.p2	NM_008137|Gna14|14675|guanine nucleotide binding protein, alpha 14	AK085444|Gna14|14675|guanine nucleotide binding protein, alpha 14
mm9_v1_chr6_-_66987377_66987402	0.0115393	HOX{A6,A7,B6,B7}.p2	BC011141|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	AK144900|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	L28177|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	NM_007836|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha
mm9_v1_chr4_+_45355039_45355115	0.0114837	HOX{A6,A7,B6,B7}.p2	AK157345|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK045241|Dcaf10|242418|DDB1 and CUL4 associated factor 10	BC085101|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr5_-_23950969_23951097	0.0114059	HOX{A6,A7,B6,B7}.p2	BC013547|Fastk|66587|Fas-activated serine/threonine kinase	AK052667|Fastk|66587|Fas-activated serine/threonine kinase	AK002552|Fastk|66587|Fas-activated serine/threonine kinase	AK038596|Fastk|66587|Fas-activated serine/threonine kinase	AK151859|Fastk|66587|Fas-activated serine/threonine kinase	AK159751|Fastk|66587|Fas-activated serine/threonine kinase	AK166508|Fastk|66587|Fas-activated serine/threonine kinase	AK167346|Fastk|66587|Fas-activated serine/threonine kinase	AK139374|Fastk|66587|Fas-activated serine/threonine kinase	AK164317|Fastk|66587|Fas-activated serine/threonine kinase	AK152369|Fastk|66587|Fas-activated serine/threonine kinase	NM_023229|Fastk|66587|Fas-activated serine/threonine kinase
mm9_v1_chr12_-_79944026_79944112	0.0114023	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_172266042_172266209	0.0113791	HOX{A6,A7,B6,B7}.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr17_+_57201623_57201743	0.0113622	HOX{A6,A7,B6,B7}.p2	AK077528|Crb3|224912|crumbs homolog 3 (Drosophila)	AK167279|Crb3|224912|crumbs homolog 3 (Drosophila)	BC024462|Crb3|224912|crumbs homolog 3 (Drosophila)	NM_177638|Crb3|224912|crumbs homolog 3 (Drosophila)
mm9_v1_chr11_-_106646226_106646242	0.0112751	HOX{A6,A7,B6,B7}.p2	AK013106|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr8_+_131028275_131028322	0.011241	HOX{A6,A7,B6,B7}.p2	AK002673|Nrp1|18186|neuropilin 1
mm9_v1_chr18_+_11052464_11052648	0.0111952	HOX{A6,A7,B6,B7}.p2	AK053151|Gata6|14465|GATA binding protein 6	NM_010258|Gata6|14465|GATA binding protein 6	AK142381|Gata6|14465|GATA binding protein 6
mm9_v1_chr12_-_86097486_86097537	0.0111878	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_83728331_83728347	0.0111155	HOX{A6,A7,B6,B7}.p2	AX775731|Ttk|22137|Ttk protein kinase	M86377|Ttk|22137|Ttk protein kinase
mm9_v1_chr9_+_99530246_99530307	0.0111121	HOX{A6,A7,B6,B7}.p2	AK034503|Dzip1l|72507|DAZ interacting protein 1-like	AK166083|Dzip1l|72507|DAZ interacting protein 1-like	AK028787|Dzip1l|72507|DAZ interacting protein 1-like
mm9_v1_chr11_-_23670766_23670992	0.0110695	HOX{A6,A7,B6,B7}.p2	AK031627|Rel|19696|reticuloendotheliosis oncogene	BC139447|Rel|19696|reticuloendotheliosis oncogene	BC139448|Rel|19696|reticuloendotheliosis oncogene	BC139770|Rel|19696|reticuloendotheliosis oncogene	NM_009044|Rel|19696|reticuloendotheliosis oncogene	X60271|Rel|19696|reticuloendotheliosis oncogene
mm9_v1_chr2_-_12340979_12341107	0.0110446	HOX{A6,A7,B6,B7}.p2	BC027202|Fam188a|66960|family with sequence similarity 188, member A	AK002900|Fam188a|66960|family with sequence similarity 188, member A	AK143250|Fam188a|66960|family with sequence similarity 188, member A	AK010050|Fam188a|66960|family with sequence similarity 188, member A	AK049869|Fam188a|66960|family with sequence similarity 188, member A	AK009891|Fam188a|66960|family with sequence similarity 188, member A	AK049694|Fam188a|66960|family with sequence similarity 188, member A	BC002225|Fam188a|66960|family with sequence similarity 188, member A	AK075792|Fam188a|66960|family with sequence similarity 188, member A	NM_024185|Fam188a|66960|family with sequence similarity 188, member A
mm9_v1_chr1_+_173275837_173275844	0.0110352	HOX{A6,A7,B6,B7}.p2	Y17393|Pfdn2|18637|prefoldin 2	BC026839|Pfdn2|18637|prefoldin 2
mm9_v1_chr4_+_117507993_117508058	0.0110207	HOX{A6,A7,B6,B7}.p2	BC021828|Slc6a9|14664|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm9_v1_chr9_+_44580978_44581111	0.0110023	HOX{A6,A7,B6,B7}.p2	AJ249981|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)	AK005360|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)	AK032880|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)	NM_023831|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)
mm9_v1_chr1_-_136852427_136852528	0.0109768	HOX{A6,A7,B6,B7}.p2	BC145746|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK046012|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK046167|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK080855|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK141375|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK042847|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_001081307|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK007727|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr6_-_72310580_72310656	0.0109594	HOX{A6,A7,B6,B7}.p2	AK195168|Rnf181|66510|ring finger protein 181	AK202921|Rnf181|66510|ring finger protein 181	AK209718|Rnf181|66510|ring finger protein 181	AK211264|Rnf181|66510|ring finger protein 181	AK211423|Rnf181|66510|ring finger protein 181	AK213249|Rnf181|66510|ring finger protein 181
mm9_v1_chr19_-_36993572_36993622	0.0109102	HOX{A6,A7,B6,B7}.p2	AK029452|Fgfbp3|72514|fibroblast growth factor binding protein 3	AK011996|Fgfbp3|72514|fibroblast growth factor binding protein 3
mm9_v1_chrX_-_50622974_50623027	0.0108876	HOX{A6,A7,B6,B7}.p2	AK036417|Fam122b|78755|family with sequence similarity 122, member B	AK044896|Fam122b|78755|family with sequence similarity 122, member B	NM_001166365|Fam122b|78755|family with sequence similarity 122, member B	NM_001166583|Fam122b|78755|family with sequence similarity 122, member B	NM_030167|Fam122b|78755|family with sequence similarity 122, member B
mm9_v1_chr19_-_45634998_45635032	0.0108269	HOX{A6,A7,B6,B7}.p2	AK133087|Poll|56626|polymerase (DNA directed), lambda	AJ131889|Poll|56626|polymerase (DNA directed), lambda	NM_020032|Poll|56626|polymerase (DNA directed), lambda
mm9_v1_chr10_-_39971060_39971064	0.0107976	HOX{A6,A7,B6,B7}.p2	AK185766|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr2_+_162843166_162843193	0.0106684	HOX{A6,A7,B6,B7}.p2	AK167194|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)
mm9_v1_chr18_-_60907984_60908001	0.0106316	HOX{A6,A7,B6,B7}.p2	AF520867|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr7_-_27951724_27951820	0.0106139	HOX{A6,A7,B6,B7}.p2	AF453879|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC023299|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC086764|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK075582|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK159206|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK167477|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152223|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152056|Egln2|112406|EGL nine homolog 2 (C. elegans)	AJ310547|Egln2|112406|EGL nine homolog 2 (C. elegans)	NM_053208|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr1_+_37426061_37426065	0.0105005	HOX{A6,A7,B6,B7}.p2	AK035867|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC120541|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC144747|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC144748|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_172971|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr10_-_33816255_33816324	0.0104617	HOX{A6,A7,B6,B7}.p2	AK161070|Fam26e|103511|family with sequence similarity 26, member E	AK052861|Fam26e|103511|family with sequence similarity 26, member E	AK078850|Fam26e|103511|family with sequence similarity 26, member E	BC025893|Fam26e|103511|family with sequence similarity 26, member E	AK085925|Fam26e|103511|family with sequence similarity 26, member E	NM_178908|Fam26e|103511|family with sequence similarity 26, member E
mm9_v1_chr12_+_60232417_60232447	0.0104087	HOX{A6,A7,B6,B7}.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr18_-_35113903_35113993	0.0103902	HOX{A6,A7,B6,B7}.p2	AK002634|Hspa9|15526|heat shock protein 9	AK004946|Hspa9|15526|heat shock protein 9	AK137109|Hspa9|15526|heat shock protein 9	D17556|Hspa9|15526|heat shock protein 9	L06896|Hspa9|15526|heat shock protein 9	D11089|Hspa9|15526|heat shock protein 9
mm9_v1_chr5_-_30764170_30764304	0.01032	HOX{A6,A7,B6,B7}.p2	AY586513|Otof|83762|otoferlin	BC145107|Otof|83762|otoferlin	BC145108|Otof|83762|otoferlin	BC150702|Otof|83762|otoferlin	AF183183|Otof|83762|otoferlin	AF183184|Otof|83762|otoferlin	AK147256|Otof|83762|otoferlin	AK147434|Otof|83762|otoferlin	AK046460|Otof|83762|otoferlin	NM_001100395|Otof|83762|otoferlin	NM_031875|Otof|83762|otoferlin
mm9_v1_chr18_-_42421635_42421796	0.0102955	HOX{A6,A7,B6,B7}.p2	AK166827|Lars|107045|leucyl-tRNA synthetase	AK129337|Lars|107045|leucyl-tRNA synthetase	BC052715|Lars|107045|leucyl-tRNA synthetase	NM_134137|Lars|107045|leucyl-tRNA synthetase	AK009823|Lars|107045|leucyl-tRNA synthetase	AK010041|Lars|107045|leucyl-tRNA synthetase
mm9_v1_chr11_-_50655047_50655053	0.0102871	HOX{A6,A7,B6,B7}.p2	BC118537|Zfp879|214779|zinc figer protein 879	AK036152|Zfp879|214779|zinc figer protein 879	NM_173387|Zfp879|214779|zinc figer protein 879
mm9_v1_chr3_-_142058595_142058659	0.0102277	HOX{A6,A7,B6,B7}.p2	AK147999|Pdlim5|56376|PDZ and LIM domain 5	AK003194|Pdlim5|56376|PDZ and LIM domain 5	AK089779|Pdlim5|56376|PDZ and LIM domain 5	NM_001190852|Pdlim5|56376|PDZ and LIM domain 5	NM_001190853|Pdlim5|56376|PDZ and LIM domain 5	NM_001190854|Pdlim5|56376|PDZ and LIM domain 5	NM_001190855|Pdlim5|56376|PDZ and LIM domain 5	NM_001190856|Pdlim5|56376|PDZ and LIM domain 5	NM_019808|Pdlim5|56376|PDZ and LIM domain 5	NM_019809|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr11_-_80191504_80191518	0.0102107	HOX{A6,A7,B6,B7}.p2	BC044897|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK153246|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK078548|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	NM_027472|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene
mm9_v1_chr11_-_106576585_106576603	0.0101967	HOX{A6,A7,B6,B7}.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr4_+_66488606_66488658	0.0100303	HOX{A6,A7,B6,B7}.p2	BC029856|Tlr4|21898|toll-like receptor 4	AK014533|Tlr4|21898|toll-like receptor 4	AK030348|Tlr4|21898|toll-like receptor 4	AF095353|Tlr4|21898|toll-like receptor 4
mm9_v1_chr17_-_71948080_71948114	0.010007	HOX{A6,A7,B6,B7}.p2	AK032413|Trmt61b|68789|tRNA methyltransferase 61 homolog B (S. cerevisiae)	AK036113|Trmt61b|68789|tRNA methyltransferase 61 homolog B (S. cerevisiae)
mm9_v1_chr15_+_34044603_34044618	0.009987	HOX{A6,A7,B6,B7}.p2	AK218970|Mtdh|67154|metadherin
mm9_v1_chr17_+_87362612_87362644	0.00997503	HOX{A6,A7,B6,B7}.p2	AB060650|Rhoq|104215|ras homolog gene family, member Q	BC048813|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr12_-_40764514_40764542	0.00992256	HOX{A6,A7,B6,B7}.p2	AK006286|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr11_+_115015491_115015512	0.00977439	HOX{A6,A7,B6,B7}.p2	BC050757|Rab37|58222|RAB37, member of RAS oncogene family	NM_021411|Rab37|58222|RAB37, member of RAS oncogene family	AK040216|Rab37|58222|RAB37, member of RAS oncogene family	AK039716|Rab37|58222|RAB37, member of RAS oncogene family	AK050483|Rab37|58222|RAB37, member of RAS oncogene family	BC128020|Rab37|58222|RAB37, member of RAS oncogene family	AB232633|Rab37|58222|RAB37, member of RAS oncogene family	AF233582|Rab37|58222|RAB37, member of RAS oncogene family
mm9_v1_chr1_+_89110855_89110976	0.00972392	HOX{A6,A7,B6,B7}.p2	BC028903|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2
mm9_v1_chr16_-_4213389_4213406	0.00972249	HOX{A6,A7,B6,B7}.p2	BC072594|Crebbp|12914|CREB binding protein	NM_001025432|Crebbp|12914|CREB binding protein	BC010297|Crebbp|12914|CREB binding protein
mm9_v1_chr8_-_87364463_87364577	0.00971309	HOX{A6,A7,B6,B7}.p2	X92410|Rad23a|19358|RAD23a homolog (S. cerevisiae)	BC138684|Rad23a|19358|RAD23a homolog (S. cerevisiae)	BC145372|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK009733|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK038300|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK161875|Rad23a|19358|RAD23a homolog (S. cerevisiae)	NM_009010|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK045224|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK165467|Rad23a|19358|RAD23a homolog (S. cerevisiae)
mm9_v1_chr13_+_36209279_36209279	0.0096745	HOX{A6,A7,B6,B7}.p2	NM_001039189|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	NM_024274|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr3_+_28680248_28680315	0.00965279	HOX{A6,A7,B6,B7}.p2	AK052412|Eif5a2|208691|eukaryotic translation initiation factor 5A2	BC106843|Eif5a2|208691|eukaryotic translation initiation factor 5A2	BC106844|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AK082214|Eif5a2|208691|eukaryotic translation initiation factor 5A2
mm9_v1_chr4_-_99495806_99495876	0.00960597	HOX{A6,A7,B6,B7}.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr1_+_75232981_75232997	0.00960187	HOX{A6,A7,B6,B7}.p2	NM_001159883|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_001159884|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_020266|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_178055|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chrX_+_7339942_7339952	0.00957391	HOX{A6,A7,B6,B7}.p2	AF510653|Tcfe3|209446|transcription factor E3
mm9_v1_chr7_-_123586952_123586976	0.00951056	HOX{A6,A7,B6,B7}.p2	AK163446|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK049609|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	U52193|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK019194|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK140908|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	NM_011083|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chrX_+_96237919_96238003	0.0094188	HOX{A6,A7,B6,B7}.p2	NM_199018|Stard8|236920|START domain containing 8	AK083435|Stard8|236920|START domain containing 8	AK133927|Stard8|236920|START domain containing 8	AK150259|Stard8|236920|START domain containing 8	AK149830|Stard8|236920|START domain containing 8	BC062944|Stard8|236920|START domain containing 8
mm9_v1_chr11_+_4537719_4537795	0.00921749	HOX{A6,A7,B6,B7}.p2	AK051387|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK048876|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK148105|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	BC013537|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	NM_029291|Ascc2|75452|activating signal cointegrator 1 complex subunit 2
mm9_v1_chr11_-_83880574_83880586	0.00905946	HOX{A6,A7,B6,B7}.p2	AK009744|Dusp14|56405|dual specificity phosphatase 14
mm9_v1_chr11_+_116532973_116533009	0.0090281	HOX{A6,A7,B6,B7}.p2	AK007675|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK013681|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK037979|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	BC055707|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK088915|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene
mm9_v1_chrX_+_90531783_90531984	0.00900848	HOX{A6,A7,B6,B7}.p2	AB006103|Arx|11878|aristaless related homeobox	BC052033|Arx|11878|aristaless related homeobox	NM_007492|Arx|11878|aristaless related homeobox
mm9_v1_chr15_+_41662472_41662583	0.00898935	HOX{A6,A7,B6,B7}.p2	NM_001130164|Oxr1|170719|oxidation resistance 1	AK014186|3110047M12Rik|73184|RIKEN cDNA 3110047M12 gene
mm9_v1_chr17_+_53706556_53706657	0.00886335	HOX{A6,A7,B6,B7}.p2	AK132486|Kat2b|18519|K(lysine) acetyltransferase 2B	BC138195|Kat2b|18519|K(lysine) acetyltransferase 2B	BC145896|Kat2b|18519|K(lysine) acetyltransferase 2B	BC082581|Kat2b|18519|K(lysine) acetyltransferase 2B	AF254442|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr10_+_89336253_89336253	0.00881202	HOX{A6,A7,B6,B7}.p2	NM_001128086|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr16_-_55838834_55839011	0.00871452	HOX{A6,A7,B6,B7}.p2	AB020974|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	BC033044|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr2_-_38860587_38860611	0.0086594	HOX{A6,A7,B6,B7}.p2	BC085091|Rpl35|66489|ribosomal protein L35
mm9_v1_chr2_+_59450123_59450159	0.00860023	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_+_105657968_105657981	0.00858173	HOX{A6,A7,B6,B7}.p2	BC071237|Ndfip2|76273|Nedd4 family interacting protein 2	BC106125|Ndfip2|76273|Nedd4 family interacting protein 2	AK078939|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr13_+_23831738_23831861	0.00845253	HOX{A6,A7,B6,B7}.p2	AK207079|Hist1h1c|50708|histone cluster 1, H1c	AK215388|Hist1h1c|50708|histone cluster 1, H1c	AK216099|Hist1h1c|50708|histone cluster 1, H1c	AK216922|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr19_+_46227016_46227019	0.00840969	HOX{A6,A7,B6,B7}.p2	AK041959|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr8_+_107694536_107694875	0.00836033	HOX{A6,A7,B6,B7}.p2	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chr11_-_94410463_94410520	0.00834799	HOX{A6,A7,B6,B7}.p2	BC139274|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC139276|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC145594|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK148401|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK046706|Rsad1|237926|radical S-adenosyl methionine domain containing 1	NM_001013381|Rsad1|237926|radical S-adenosyl methionine domain containing 1
mm9_v1_chrX_+_54043764_54043779	0.00832422	HOX{A6,A7,B6,B7}.p2	BC055725|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr11_+_98247915_98247945	0.00831487	HOX{A6,A7,B6,B7}.p2	BC119079|Pnmt|18948|phenylethanolamine-N-methyltransferase	BC120789|Pnmt|18948|phenylethanolamine-N-methyltransferase	AK136691|Pnmt|18948|phenylethanolamine-N-methyltransferase	NM_008890|Pnmt|18948|phenylethanolamine-N-methyltransferase
mm9_v1_chr13_-_117814322_117814345	0.00827838	HOX{A6,A7,B6,B7}.p2	NM_001081009|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK155693|Parp8|52552|poly (ADP-ribose) polymerase family, member 8
mm9_v1_chr9_+_46091073_46091104	0.00826749	HOX{A6,A7,B6,B7}.p2	AK038126|Bud13|215051|BUD13 homolog (yeast)	AK051047|Bud13|215051|BUD13 homolog (yeast)	AK077744|Bud13|215051|BUD13 homolog (yeast)	NM_146000|Bud13|215051|BUD13 homolog (yeast)	AK037134|Bud13|215051|BUD13 homolog (yeast)	BC025490|Bud13|215051|BUD13 homolog (yeast)
mm9_v1_chr14_-_32643594_32643685	0.00825867	HOX{A6,A7,B6,B7}.p2	BC051456|Ankrd28|105522|ankyrin repeat domain 28	BC094609|Ankrd28|105522|ankyrin repeat domain 28	NM_001024604|Ankrd28|105522|ankyrin repeat domain 28
mm9_v1_chr4_-_148500769_148500849	0.00825685	HOX{A6,A7,B6,B7}.p2	AF013253|Cort|12854|cortistatin	AK013496|Cort|12854|cortistatin	NM_007745|Cort|12854|cortistatin
mm9_v1_chr18_+_34490797_34490849	0.00818728	HOX{A6,A7,B6,B7}.p2	AK004118|Srp19|66384|signal recognition particle 19	AK037009|Srp19|66384|signal recognition particle 19	NM_025527|Srp19|66384|signal recognition particle 19	AK010760|Srp19|66384|signal recognition particle 19	AK152322|Srp19|66384|signal recognition particle 19	AK135508|Srp19|66384|signal recognition particle 19	AK162107|Srp19|66384|signal recognition particle 19	BC051932|Srp19|66384|signal recognition particle 19	AK009412|Srp19|66384|signal recognition particle 19
mm9_v1_chrX_+_155694051_155694051	0.00816411	HOX{A6,A7,B6,B7}.p2	AY083469|Rps6ka3|110651|ribosomal protein S6 kinase polypeptide 3	BC150156|Rps6ka3|110651|ribosomal protein S6 kinase polypeptide 3	BC150478|Rps6ka3|110651|ribosomal protein S6 kinase polypeptide 3	NM_148945|Rps6ka3|110651|ribosomal protein S6 kinase polypeptide 3
mm9_v1_chr6_+_124915623_124915638	0.00813816	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_83071542_83071559	0.00804492	HOX{A6,A7,B6,B7}.p2	BC005666|Wbp1|22377|WW domain binding protein 1
mm9_v1_chr1_-_88255943_88256002	0.00803967	HOX{A6,A7,B6,B7}.p2	AK083307|Ncl|17975|nucleolin	AK161706|Ncl|17975|nucleolin	AK031606|Ncl|17975|nucleolin
mm9_v1_chr12_-_81361302_81361387	0.00797907	HOX{A6,A7,B6,B7}.p2	BC054830|Actn1|109711|actinin, alpha 1	AK154281|Actn1|109711|actinin, alpha 1	NM_134156|Actn1|109711|actinin, alpha 1
mm9_v1_chr4_+_108551674_108551769	0.00797317	HOX{A6,A7,B6,B7}.p2	AK082959|Rab3b|69908|RAB3B, member RAS oncogene family	NM_023537|Rab3b|69908|RAB3B, member RAS oncogene family	AK012165|Rab3b|69908|RAB3B, member RAS oncogene family	BC051918|Rab3b|69908|RAB3B, member RAS oncogene family
mm9_v1_chr14_+_105658112_105658180	0.00789628	HOX{A6,A7,B6,B7}.p2	BC117075|Ndfip2|76273|Nedd4 family interacting protein 2	BC119092|Ndfip2|76273|Nedd4 family interacting protein 2	AK013250|Ndfip2|76273|Nedd4 family interacting protein 2	AF411608|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr5_-_23218477_23218493	0.00785329	HOX{A6,A7,B6,B7}.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr11_+_119464218_119464296	0.00783214	HOX{A6,A7,B6,B7}.p2	AK161011|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr3_-_88229007_88229060	0.0078197	HOX{A6,A7,B6,B7}.p2	BC052771|Slc25a44|229517|solute carrier family 25, member 44	AK166331|Slc25a44|229517|solute carrier family 25, member 44	AK169886|Slc25a44|229517|solute carrier family 25, member 44	AK044648|Slc25a44|229517|solute carrier family 25, member 44	AK046586|Slc25a44|229517|solute carrier family 25, member 44	AK079532|Slc25a44|229517|solute carrier family 25, member 44	AK165159|Slc25a44|229517|solute carrier family 25, member 44	AK083470|Slc25a44|229517|solute carrier family 25, member 44	AK083273|Slc25a44|229517|solute carrier family 25, member 44	AK144731|Slc25a44|229517|solute carrier family 25, member 44	AK166011|Slc25a44|229517|solute carrier family 25, member 44	AK168955|Slc25a44|229517|solute carrier family 25, member 44	AK032960|Slc25a44|229517|solute carrier family 25, member 44	AK134914|Slc25a44|229517|solute carrier family 25, member 44	NM_001145876|Slc25a44|229517|solute carrier family 25, member 44	NM_001145877|Slc25a44|229517|solute carrier family 25, member 44	NM_178696|Slc25a44|229517|solute carrier family 25, member 44
mm9_v1_chr3_-_132754703_132754778	0.0078121	HOX{A6,A7,B6,B7}.p2	BC047136|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	NM_026231|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	AK044441|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	AK033409|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	AK037169|Gstcd|67553|glutathione S-transferase, C-terminal domain containing
mm9_v1_chr2_+_152788220_152788276	0.00769969	HOX{A6,A7,B6,B7}.p2	AK006027|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	NM_001083618|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	NM_029064|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AK015388|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AK015740|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	BC130024|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	BC148285|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AM690753|Ttll9|74711|tubulin tyrosine ligase-like family, member 9
mm9_v1_chr3_+_53267587_53267689	0.0076692	HOX{A6,A7,B6,B7}.p2	AK034174|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr13_+_21902235_21902335	0.00766719	HOX{A6,A7,B6,B7}.p2	BC147161|Hist1h2ap|319171|histone cluster 1, H2ap	BC147162|Hist1h2ap|319171|histone cluster 1, H2ap	NM_001177544|Hist1h2ao|665433|histone cluster 1, H2ao	AK145443|Hist1h2ap|319171|histone cluster 1, H2ap	AK146846|Hist1h2ap|319171|histone cluster 1, H2ap	BC062251|Hist1h2ap|319171|histone cluster 1, H2ap	BC090402|Hist1h2ap|319171|histone cluster 1, H2ap	BC110626|Hist1h2ap|319171|histone cluster 1, H2ap	BC116373|Hist1h2ai|319191|histone cluster 1, H2ai	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	BC133661|Hist1h2ap|319171|histone cluster 1, H2ap	BC134370|Hist1h2ah|319168|histone cluster 1, H2ah	NM_178185|Hist1h2ap|319171|histone cluster 1, H2ap
mm9_v1_chr6_-_6167086_6167104	0.00763122	HOX{A6,A7,B6,B7}.p2	AK029020|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr5_+_91456489_91456542	0.00753462	HOX{A6,A7,B6,B7}.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chrX_+_98469429_98469601	0.00751111	HOX{A6,A7,B6,B7}.p2	BC090654|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)	NM_021521|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)
mm9_v1_chr17_-_74715708_74715816	0.00737062	HOX{A6,A7,B6,B7}.p2	NM_001146222|Dpy30|66310|dpy-30 homolog (C. elegans)	BC002240|Dpy30|66310|dpy-30 homolog (C. elegans)	AK013073|Dpy30|66310|dpy-30 homolog (C. elegans)	AK077902|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_001146223|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr16_-_10313924_10313944	0.00735101	HOX{A6,A7,B6,B7}.p2	AF083876|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr8_-_46020512_46020524	0.00734528	HOX{A6,A7,B6,B7}.p2	AK079043|Gm9908|100045396|predicted gene 9908
mm9_v1_chr3_+_59835700_59835727	0.00726454	HOX{A6,A7,B6,B7}.p2	NM_023383|Aadac|67758|arylacetamide deacetylase (esterase)	AK008244|Aadac|67758|arylacetamide deacetylase (esterase)	BC054823|Aadac|67758|arylacetamide deacetylase (esterase)	BC019999|Aadac|67758|arylacetamide deacetylase (esterase)
mm9_v1_chr11_-_78059124_78059213	0.00725366	HOX{A6,A7,B6,B7}.p2	BC072657|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)	AK170533|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)	U40375|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)	NM_009297|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)
mm9_v1_chr12_+_81891598_81891755	0.00721891	HOX{A6,A7,B6,B7}.p2	AK129100|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr7_-_52147628_52147748	0.00721187	HOX{A6,A7,B6,B7}.p2	AK209813|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK089940|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	NM_029365|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm9_v1_chr11_-_106649811_106649871	0.00719879	HOX{A6,A7,B6,B7}.p2	AK132779|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr16_+_90831052_90831391	0.00709312	HOX{A6,A7,B6,B7}.p2	AK037486|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC132305|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC144751|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC157969|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC100350|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	NM_027627|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	AF358257|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene
mm9_v1_chr13_+_22036962_22036998	0.00709184	HOX{A6,A7,B6,B7}.p2	BC053084|Zfp184|193452|zinc finger protein 184 (Kruppel-like)	NM_183014|Zfp184|193452|zinc finger protein 184 (Kruppel-like)	AK036164|Zfp184|193452|zinc finger protein 184 (Kruppel-like)
mm9_v1_chr4_+_124377942_124377978	0.00703015	HOX{A6,A7,B6,B7}.p2	NM_010213|Fhl3|14201|four and a half LIM domains 3	AF114382|Fhl3|14201|four and a half LIM domains 3	BC144903|Fhl3|14201|four and a half LIM domains 3	BC145939|Fhl3|14201|four and a half LIM domains 3
mm9_v1_chr13_+_49748707_49748855	0.00699892	HOX{A6,A7,B6,B7}.p2	AK147172|Nol8|70930|nucleolar protein 8	NM_001081350|Nol8|70930|nucleolar protein 8	BC125575|Nol8|70930|nucleolar protein 8	BC125579|Nol8|70930|nucleolar protein 8	AK029961|Nol8|70930|nucleolar protein 8	BC049166|Nol8|70930|nucleolar protein 8
mm9_v1_chr14_+_32898913_32898957	0.00694855	HOX{A6,A7,B6,B7}.p2	AK139884|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1	NM_145460|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1
mm9_v1_chr7_+_28366447_28366590	0.00688726	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_8778260_8778451	0.00686716	HOX{A6,A7,B6,B7}.p2	AK168091|Sdc1|20969|syndecan 1	AF134897|Sdc1|20969|syndecan 1	AK188181|Sdc1|20969|syndecan 1
mm9_v1_chr11_-_94183188_94183309	0.00674571	HOX{A6,A7,B6,B7}.p2	AK014362|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	BC009092|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	NM_026313|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK078090|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK151228|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK151839|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK019464|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)
mm9_v1_chr15_-_102341090_102341132	0.00674536	HOX{A6,A7,B6,B7}.p2	AK166435|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12
mm9_v1_chr3_-_59066744_59066767	0.00672426	HOX{A6,A7,B6,B7}.p2	BC025428|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	AK013804|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	NM_027571|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr15_-_34424900_34424913	0.0067008	HOX{A6,A7,B6,B7}.p2	BC125590|Hrsp12|15473|heat-responsive protein 12	BC125592|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr11_+_102962999_102963023	0.00667106	HOX{A6,A7,B6,B7}.p2	NM_025988|Acbd4|67131|acyl-Coenzyme A binding domain containing 4	AK079604|Acbd4|67131|acyl-Coenzyme A binding domain containing 4
mm9_v1_chr17_+_41097513_41097693	0.00665341	HOX{A6,A7,B6,B7}.p2	AK029425|Mut|17850|methylmalonyl-Coenzyme A mutase	AK012766|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr5_-_125914417_125914513	0.00660026	HOX{A6,A7,B6,B7}.p2	BC066077|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37	NM_203319|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37	BC080298|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37	AK148257|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37
mm9_v1_chr2_+_119151519_119151564	0.00659822	HOX{A6,A7,B6,B7}.p2	AK052322|Dll4|54485|delta-like 4 (Drosophila)	NM_019454|Dll4|54485|delta-like 4 (Drosophila)	AK004739|Dll4|54485|delta-like 4 (Drosophila)	AK031699|Dll4|54485|delta-like 4 (Drosophila)	AK165517|Dll4|54485|delta-like 4 (Drosophila)	AK171717|Dll4|54485|delta-like 4 (Drosophila)	BC049130|Dll4|54485|delta-like 4 (Drosophila)	AF253469|Dll4|54485|delta-like 4 (Drosophila)	BC042497|Dll4|54485|delta-like 4 (Drosophila)
mm9_v1_chr10_-_79785786_79785871	0.00645577	HOX{A6,A7,B6,B7}.p2	BC052535|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chr3_+_95733163_95733182	0.00645498	HOX{A6,A7,B6,B7}.p2	AK172146|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	NM_023210|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr17_-_32458143_32458182	0.00642746	HOX{A6,A7,B6,B7}.p2	BC060209|Akap8|56399|A kinase (PRKA) anchor protein 8
mm9_v1_chr2_+_30271579_30271778	0.00640359	HOX{A6,A7,B6,B7}.p2	AK049184|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC006626|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC052852|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK160980|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AY035997|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK046288|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr18_-_35658485_35658600	0.00625735	HOX{A6,A7,B6,B7}.p2	BC028488|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AJ297884|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AK170415|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016466|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016119|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	NM_030749|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm9_v1_chr12_+_86337250_86337338	0.00625486	HOX{A6,A7,B6,B7}.p2	AK044440|Ylpm1|56531|YLP motif containing 1	NM_178363|Ylpm1|56531|YLP motif containing 1	BC031541|Ylpm1|56531|YLP motif containing 1	AK087500|Ylpm1|56531|YLP motif containing 1	AB033168|Ylpm1|56531|YLP motif containing 1
mm9_v1_chr7_+_123587067_123587088	0.00620474	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_-_7348290_7348316	0.00618539	HOX{A6,A7,B6,B7}.p2	AK037223|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	AK031136|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	AK033332|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	NM_178748|Egflam|268780|EGF-like, fibronectin type III and laminin G domains
mm9_v1_chr1_+_172574662_172574663	0.00612964	HOX{A6,A7,B6,B7}.p2	AK042424|Olfml2b|320078|olfactomedin-like 2B	NM_177068|Olfml2b|320078|olfactomedin-like 2B
mm9_v1_chr2_-_13192850_13192974	0.00611682	HOX{A6,A7,B6,B7}.p2	X63039|Rsu1|20163|Ras suppressor protein 1	BC003827|Rsu1|20163|Ras suppressor protein 1	NM_009105|Rsu1|20163|Ras suppressor protein 1	AK150011|Rsu1|20163|Ras suppressor protein 1	AK149835|Rsu1|20163|Ras suppressor protein 1	AK152655|Rsu1|20163|Ras suppressor protein 1	AK009288|Rsu1|20163|Ras suppressor protein 1	AK011857|Rsu1|20163|Ras suppressor protein 1	AK135491|Rsu1|20163|Ras suppressor protein 1	AK169076|Rsu1|20163|Ras suppressor protein 1
mm9_v1_chr17_+_26792701_26792940	0.00608007	HOX{A6,A7,B6,B7}.p2	AK177289|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK191970|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK204835|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chrX_-_98615554_98615567	0.00605698	HOX{A6,A7,B6,B7}.p2	AK082075|Zmym3|56364|zinc finger, MYM-type 3	NM_001177988|Zmym3|56364|zinc finger, MYM-type 3	NM_019831|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr7_+_19813689_19813779	0.00604719	HOX{A6,A7,B6,B7}.p2	AK170977|Opa3|403187|optic atrophy 3 (human)	BC094601|Opa3|403187|optic atrophy 3 (human)	AK165767|Opa3|403187|optic atrophy 3 (human)	AK052774|Opa3|403187|optic atrophy 3 (human)	AK154917|Opa3|403187|optic atrophy 3 (human)	AK154960|Opa3|403187|optic atrophy 3 (human)	AK164755|Opa3|403187|optic atrophy 3 (human)	NM_207525|Opa3|403187|optic atrophy 3 (human)	AK133480|Opa3|403187|optic atrophy 3 (human)	BC132309|Opa3|403187|optic atrophy 3 (human)	BC132311|Opa3|403187|optic atrophy 3 (human)
mm9_v1_chr3_+_102538849_102538895	0.00600869	HOX{A6,A7,B6,B7}.p2	AK032520|Tspan2|70747|tetraspanin 2	AK079560|Tspan2|70747|tetraspanin 2	AK018178|Tspan2|70747|tetraspanin 2	AK049888|Tspan2|70747|tetraspanin 2
mm9_v1_chr17_-_46817800_46817900	0.00597899	HOX{A6,A7,B6,B7}.p2	BC018154|Klhdc3|71765|kelch domain containing 3	AK004964|Klhdc3|71765|kelch domain containing 3	AK141673|Klhdc3|71765|kelch domain containing 3	NM_001163729|Klhdc3|71765|kelch domain containing 3	NM_027910|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr3_-_95861752_95861793	0.00584312	HOX{A6,A7,B6,B7}.p2	AK083678|Vps45|22365|vacuolar protein sorting 45 (yeast)	BC058528|Vps45|22365|vacuolar protein sorting 45 (yeast)	AK146190|Vps45|22365|vacuolar protein sorting 45 (yeast)	AK168101|Vps45|22365|vacuolar protein sorting 45 (yeast)
mm9_v1_chrX_-_132602648_132602774	0.00582349	HOX{A6,A7,B6,B7}.p2	AF097439|Bex2|12069|brain expressed X-linked 2	BC027529|Bex2|12069|brain expressed X-linked 2	AK132005|Bex2|12069|brain expressed X-linked 2	NM_009749|Bex2|12069|brain expressed X-linked 2
mm9_v1_chr4_+_117507819_117507873	0.00579695	HOX{A6,A7,B6,B7}.p2	NM_008135|Slc6a9|14664|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm9_v1_chr11_+_83286587_83286623	0.00579643	HOX{A6,A7,B6,B7}.p2	AK011843|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK078205|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK051568|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_027427|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK166550|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr7_-_17641980_17642027	0.00576983	HOX{A6,A7,B6,B7}.p2	BC120587|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	AF060194|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	NM_016868|Hif3a|53417|hypoxia inducible factor 3, alpha subunit
mm9_v1_chr17_-_24306262_24306418	0.00571	HOX{A6,A7,B6,B7}.p2	BC132267|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC132611|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC126881|Atp6v0c-ps2|100039636|ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2	BC099475|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC050939|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK146159|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK170346|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC083129|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK002871|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK028239|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	M64298|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	NM_009729|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK002570|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK014361|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C
mm9_v1_chr18_-_62708343_62708418	0.0056883	HOX{A6,A7,B6,B7}.p2	AK031096|Fbxo38|107035|F-box protein 38	BC056348|Fbxo38|107035|F-box protein 38	AK089046|Fbxo38|107035|F-box protein 38	NM_134136|Fbxo38|107035|F-box protein 38
mm9_v1_chrX_+_68809092_68809096	0.00568125	HOX{A6,A7,B6,B7}.p2	AK141399|Hmgb3|15354|high mobility group box 3	AK146795|Hmgb3|15354|high mobility group box 3
mm9_v1_chr1_-_187153269_187153279	0.0055936	HOX{A6,A7,B6,B7}.p2	AK085714|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043590|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK048653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK078183|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	NM_198653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr19_-_45824047_45824092	0.00559132	HOX{A6,A7,B6,B7}.p2	AK011749|Npm3|18150|nucleoplasmin 3	NM_008723|Npm3|18150|nucleoplasmin 3	U64450|Npm3|18150|nucleoplasmin 3	AK146603|Npm3|18150|nucleoplasmin 3	AK171848|Npm3|18150|nucleoplasmin 3	AK157198|Npm3|18150|nucleoplasmin 3	BC048491|Npm3|18150|nucleoplasmin 3
mm9_v1_chr11_-_100355280_100355392	0.00542665	HOX{A6,A7,B6,B7}.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr7_+_129210948_129210953	0.00541248	HOX{A6,A7,B6,B7}.p2	AK135258|Ubfd1|28018|ubiquitin family domain containing 1	AK140891|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr2_+_164311639_164311740	0.00536289	HOX{A6,A7,B6,B7}.p2	NM_001048227|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr5_+_34339551_34339692	0.0053241	HOX{A6,A7,B6,B7}.p2	BC075616|Nat8l|269642|N-acetyltransferase 8-like	DQ174094|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr7_-_74790088_74790121	0.00529614	HOX{A6,A7,B6,B7}.p2	AK004904|Lrrc28|67867|leucine rich repeat containing 28	AK008713|Lrrc28|67867|leucine rich repeat containing 28	AK159417|Lrrc28|67867|leucine rich repeat containing 28	AK050154|Lrrc28|67867|leucine rich repeat containing 28	AK077270|Lrrc28|67867|leucine rich repeat containing 28	NM_027413|Lrrc28|67867|leucine rich repeat containing 28	NM_175124|Lrrc28|67867|leucine rich repeat containing 28
mm9_v1_chr2_-_25877230_25877291	0.00528791	HOX{A6,A7,B6,B7}.p2	BC021811|Ubac1|98766|ubiquitin associated domain containing 1	NM_133835|Ubac1|98766|ubiquitin associated domain containing 1
mm9_v1_chr6_-_71561919_71561988	0.0052673	HOX{A6,A7,B6,B7}.p2	AK049243|Kdm3a|104263|lysine (K)-specific demethylase 3A
mm9_v1_chr9_+_103207488_103207656	0.00517593	HOX{A6,A7,B6,B7}.p2	AK085031|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK129104|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084654|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084869|Topbp1|235559|topoisomerase (DNA) II binding protein 1	BC049797|Topbp1|235559|topoisomerase (DNA) II binding protein 1	NM_176979|Topbp1|235559|topoisomerase (DNA) II binding protein 1
mm9_v1_chr3_+_63100128_63100144	0.00515243	HOX{A6,A7,B6,B7}.p2	AK040730|Mme|17380|membrane metallo endopeptidase	AK080202|Mme|17380|membrane metallo endopeptidase	BC034092|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr12_-_15823590_15823683	0.00512156	HOX{A6,A7,B6,B7}.p2	NM_144551|Trib2|217410|tribbles homolog 2 (Drosophila)	AK144192|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr9_-_21889841_21889883	0.00511964	HOX{A6,A7,B6,B7}.p2	BC004583|Ecsit|26940|ECSIT homolog (Drosophila)	AK007564|Ecsit|26940|ECSIT homolog (Drosophila)	AK012835|Ecsit|26940|ECSIT homolog (Drosophila)
mm9_v1_chrX_+_91612471_91612621	0.00510106	HOX{A6,A7,B6,B7}.p2	AK002320|Apoo|68316|apolipoprotein O	AK003831|Apoo|68316|apolipoprotein O	BC016557|Apoo|68316|apolipoprotein O	BC107208|Apoo|68316|apolipoprotein O	BC107209|Apoo|68316|apolipoprotein O
mm9_v1_chr11_-_57982024_57982049	0.0050718	HOX{A6,A7,B6,B7}.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr17_+_56301899_56301970	0.00504669	HOX{A6,A7,B6,B7}.p2	AK090348|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	NM_025566|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK150678|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK153177|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK011245|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK136962|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1
mm9_v1_chr17_+_80014239_80014239	0.00503827	HOX{A6,A7,B6,B7}.p2	AK034617|Fam82a1|381110|family with sequence similarity 82, member A1	NM_201361|Fam82a1|381110|family with sequence similarity 82, member A1
mm9_v1_chr1_-_172797866_172797977	0.00500631	HOX{A6,A7,B6,B7}.p2	AK020270|Atf6|226641|activating transcription factor 6	AK087000|Atf6|226641|activating transcription factor 6	AK036106|Atf6|226641|activating transcription factor 6	BC141028|Atf6|226641|activating transcription factor 6	AK036335|Atf6|226641|activating transcription factor 6	NM_001081304|Atf6|226641|activating transcription factor 6
mm9_v1_chr1_-_97564139_97564174	0.00498839	HOX{A6,A7,B6,B7}.p2	BC060112|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AJ223956|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_001159745|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_009183|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	X86000|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr19_+_5474686_5474769	0.00496495	HOX{A6,A7,B6,B7}.p2	NM_021474|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AK075585|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	NM_001164352|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AF109122|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm9_v1_chr9_-_44728790_44728826	0.00495993	HOX{A6,A7,B6,B7}.p2	AK011099|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019320|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008036|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008169|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC089555|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005380|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	NM_013795|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr3_+_128902822_128902860	0.00495769	HOX{A6,A7,B6,B7}.p2	AB006321|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_011098|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_001042504|Pitx2|18741|paired-like homeodomain transcription factor 2	U80011|Pitx2|18741|paired-like homeodomain transcription factor 2	U80036|Pitx2|18741|paired-like homeodomain transcription factor 2	AF048723|Pitx2|18741|paired-like homeodomain transcription factor 2	U80010|Pitx2|18741|paired-like homeodomain transcription factor 2
mm9_v1_chr15_-_79517827_79517983	0.00493181	HOX{A6,A7,B6,B7}.p2	AK209570|Josd1|74158|Josephin domain containing 1
mm9_v1_chr14_-_122364309_122364416	0.00482995	HOX{A6,A7,B6,B7}.p2	BC052868|Gpr183|321019|G protein-coupled receptor 183	AK141593|Gpr183|321019|G protein-coupled receptor 183	AK153216|Gpr183|321019|G protein-coupled receptor 183	AK087951|Gpr183|321019|G protein-coupled receptor 183	AK156005|Gpr183|321019|G protein-coupled receptor 183	AK156289|Gpr183|321019|G protein-coupled receptor 183	NM_183031|Gpr183|321019|G protein-coupled receptor 183	AK138693|Gpr183|321019|G protein-coupled receptor 183
mm9_v1_chr3_+_152009474_152009480	0.00481908	HOX{A6,A7,B6,B7}.p2	AK047530|Usp33|170822|ubiquitin specific peptidase 33
mm9_v1_chr1_-_52784249_52784305	0.00480007	HOX{A6,A7,B6,B7}.p2	AK046866|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr14_-_75530687_75530723	0.00479291	HOX{A6,A7,B6,B7}.p2	BC145796|Lrrc63|70859|leucine rich repeat containing 63	NM_027581|Lrrc63|70859|leucine rich repeat containing 63
mm9_v1_chr11_-_101755622_101755677	0.00477431	HOX{A6,A7,B6,B7}.p2	Z15103|Meox1|17285|mesenchyme homeobox 1	BC011082|Meox1|17285|mesenchyme homeobox 1	NM_010791|Meox1|17285|mesenchyme homeobox 1	AK052370|Meox1|17285|mesenchyme homeobox 1
mm9_v1_chr4_+_117507914_117507983	0.0047233	HOX{A6,A7,B6,B7}.p2	AK014572|Slc6a9|14664|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	X67056|Slc6a9|14664|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm9_v1_chr2_-_157392026_157392132	0.00471374	HOX{A6,A7,B6,B7}.p2	AB037891|Blcap|53619|bladder cancer associated protein homolog (human)	BC026935|Blcap|53619|bladder cancer associated protein homolog (human)	BC083339|Blcap|53619|bladder cancer associated protein homolog (human)	AK038884|Blcap|53619|bladder cancer associated protein homolog (human)	AK011673|Blcap|53619|bladder cancer associated protein homolog (human)	AK170338|Blcap|53619|bladder cancer associated protein homolog (human)	AK018127|Blcap|53619|bladder cancer associated protein homolog (human)	NM_016916|Blcap|53619|bladder cancer associated protein homolog (human)
mm9_v1_chr13_+_24895094_24895151	0.00467676	HOX{A6,A7,B6,B7}.p2	BC002217|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr10_+_127669154_127669189	0.00452266	HOX{A6,A7,B6,B7}.p2	BC058641|Timeless|21853|timeless homolog (Drosophila)	BC082770|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr3_-_89017811_89017848	0.00445098	HOX{A6,A7,B6,B7}.p2	AK163982|Mtx1|17827|metaxin 1	AK165547|Mtx1|17827|metaxin 1	L36962|Mtx1|17827|metaxin 1	BC023071|Mtx1|17827|metaxin 1	AK159316|Mtx1|17827|metaxin 1	AK165923|Mtx1|17827|metaxin 1	L10897|Mtx1|17827|metaxin 1	AK086135|Mtx1|17827|metaxin 1
mm9_v1_chr4_+_140857147_140857182	0.00444057	HOX{A6,A7,B6,B7}.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr12_+_74387798_74387894	0.00438903	HOX{A6,A7,B6,B7}.p2	NM_001037717|Slc38a6|625098|solute carrier family 38, member 6	AK140045|Slc38a6|625098|solute carrier family 38, member 6	AK054341|Slc38a6|625098|solute carrier family 38, member 6	BC157917|Slc38a6|625098|solute carrier family 38, member 6	BC157928|Slc38a6|625098|solute carrier family 38, member 6
mm9_v1_chr13_+_91062722_91062758	0.00438539	HOX{A6,A7,B6,B7}.p2	NM_024175|Rps23|66475|ribosomal protein S23	AK166994|Rps23|66475|ribosomal protein S23	AK010667|Rps23|66475|ribosomal protein S23
mm9_v1_chr14_+_68334187_68334420	0.00432819	HOX{A6,A7,B6,B7}.p2	AK087312|Kctd9|105440|potassium channel tetramerisation domain containing 9	AK166501|Kctd9|105440|potassium channel tetramerisation domain containing 9	BC011302|Kctd9|105440|potassium channel tetramerisation domain containing 9
mm9_v1_chr9_+_20104572_20104654	0.00432502	HOX{A6,A7,B6,B7}.p2	BC139140|Olfr873|258554|olfactory receptor 873	NM_146561|Olfr873|258554|olfactory receptor 873
mm9_v1_chr11_+_102050933_102051034	0.00419	HOX{A6,A7,B6,B7}.p2	AK002966|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	BC069959|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	NM_175935|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr10_-_94407211_94407349	0.00409448	HOX{A6,A7,B6,B7}.p2	AF190578|Plxnc1|54712|plexin C1	NM_018797|Plxnc1|54712|plexin C1
mm9_v1_chr8_-_73046985_73047078	0.00396538	HOX{A6,A7,B6,B7}.p2	AK155003|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK013135|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK002695|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC048938|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC053944|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	NM_029366|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene
mm9_v1_chr9_+_66006060_66006077	0.00387803	HOX{A6,A7,B6,B7}.p2	AK004350|Dapk2|13143|death-associated protein kinase 2	BC022165|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr15_-_34424934_34424961	0.00387743	HOX{A6,A7,B6,B7}.p2	BC092375|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr8_+_35870663_35870710	0.00387465	HOX{A6,A7,B6,B7}.p2	AK080964|Dusp4|319520|dual specificity phosphatase 4	NM_176933|Dusp4|319520|dual specificity phosphatase 4	AK053746|Dusp4|319520|dual specificity phosphatase 4	BC118941|Dusp4|319520|dual specificity phosphatase 4	BC118942|Dusp4|319520|dual specificity phosphatase 4
mm9_v1_chr11_-_113612629_113612637	0.00384979	HOX{A6,A7,B6,B7}.p2	AB035088|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr14_+_76815627_76815627	0.00377269	HOX{A6,A7,B6,B7}.p2	BC058660|Tsc22d1|21807|TSC22 domain family, member 1	NM_207652|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr5_-_148211881_148212064	0.0037267	HOX{A6,A7,B6,B7}.p2	AK149292|Flt3|14255|FMS-like tyrosine kinase 3	AK045865|Flt3|14255|FMS-like tyrosine kinase 3	X59398|Flt3|14255|FMS-like tyrosine kinase 3	AK163640|Flt3|14255|FMS-like tyrosine kinase 3	NM_010229|Flt3|14255|FMS-like tyrosine kinase 3
mm9_v1_chr11_+_119352933_119353046	0.00357099	HOX{A6,A7,B6,B7}.p2	NM_177394|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK170595|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK172181|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	BC056486|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK042626|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr11_+_106649938_106649986	0.00356119	HOX{A6,A7,B6,B7}.p2	AK089185|Ccdc45|320162|coiled-coil domain containing 45	AK084665|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr7_+_13610378_13610395	0.0035538	HOX{A6,A7,B6,B7}.p2	AK217247|Trim28|21849|tripartite motif-containing 28
mm9_v1_chr2_-_80287781_80287882	0.00354981	HOX{A6,A7,B6,B7}.p2	U91905|Frzb|20378|frizzled-related protein
mm9_v1_chr16_-_11220854_11220973	0.00351567	HOX{A6,A7,B6,B7}.p2	AK218484|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr2_+_29917372_29917400	0.00348647	HOX{A6,A7,B6,B7}.p2	AK172327|Set|56086|SET nuclear oncogene	AK014291|Set|56086|SET nuclear oncogene	AK031561|Set|56086|SET nuclear oncogene
mm9_v1_chr16_+_23429205_23429359	0.00348512	HOX{A6,A7,B6,B7}.p2	AK047543|Rtp1|239766|receptor transporter protein 1	NM_001004151|Rtp1|239766|receptor transporter protein 1	BC138910|Rtp1|239766|receptor transporter protein 1	BC138912|Rtp1|239766|receptor transporter protein 1	AY562225|Rtp1|239766|receptor transporter protein 1	EU070411|Rtp1|239766|receptor transporter protein 1
mm9_v1_chr19_+_41904459_41904605	0.00345807	HOX{A6,A7,B6,B7}.p2	NM_008043|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	AK015680|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	BC140987|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	U58974|Frat1|14296|frequently rearranged in advanced T-cell lymphomas
mm9_v1_chr2_-_62249934_62250287	0.00340259	HOX{A6,A7,B6,B7}.p2	X58384|Dpp4|13482|dipeptidylpeptidase 4	AK040409|Dpp4|13482|dipeptidylpeptidase 4	BC022183|Dpp4|13482|dipeptidylpeptidase 4	AK163085|Dpp4|13482|dipeptidylpeptidase 4	NM_001159543|Dpp4|13482|dipeptidylpeptidase 4	NM_010074|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr18_+_36953553_36953593	0.00336882	HOX{A6,A7,B6,B7}.p2	BC024881|Zmat2|66492|zinc finger, matrin type 2	NM_025594|Zmat2|66492|zinc finger, matrin type 2	AK012091|Zmat2|66492|zinc finger, matrin type 2	BC089501|Zmat2|66492|zinc finger, matrin type 2	AK008717|Zmat2|66492|zinc finger, matrin type 2
mm9_v1_chr3_-_135354500_135354532	0.00312935	HOX{A6,A7,B6,B7}.p2	BC050841|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	NM_008689|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr17_-_36394771_36394836	0.00312784	HOX{A6,A7,B6,B7}.p2	AK003455|Rpp21|67676|ribonuclease P 21 subunit (human)	AK002780|Rpp21|67676|ribonuclease P 21 subunit (human)	NM_026308|Rpp21|67676|ribonuclease P 21 subunit (human)	AJ504717|Rpp21|67676|ribonuclease P 21 subunit (human)	AY251016|Rpp21|67676|ribonuclease P 21 subunit (human)	AY251017|Rpp21|67676|ribonuclease P 21 subunit (human)	BC028491|Rpp21|67676|ribonuclease P 21 subunit (human)
mm9_v1_chr14_-_102008407_102008407	0.00311601	HOX{A6,A7,B6,B7}.p2	AK039337|Tbc1d4|210789|TBC1 domain family, member 4	NM_001081278|Tbc1d4|210789|TBC1 domain family, member 4
mm9_v1_chr11_+_98308333_98308404	0.00305919	HOX{A6,A7,B6,B7}.p2	AK145996|Grb7|14786|growth factor receptor bound protein 7	BC081547|Grb7|14786|growth factor receptor bound protein 7	AK168438|Grb7|14786|growth factor receptor bound protein 7	AK220277|Grb7|14786|growth factor receptor bound protein 7	BC003295|Grb7|14786|growth factor receptor bound protein 7
mm9_v1_chr11_+_94189524_94189598	0.00300339	HOX{A6,A7,B6,B7}.p2	AK017451|Ankrd40|71452|ankyrin repeat domain 40	L10902|Ankrd40|71452|ankyrin repeat domain 40
mm9_v1_chr9_+_69837253_69837421	0.00299887	HOX{A6,A7,B6,B7}.p2	AK169609|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK054288|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_016787|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK159745|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK014659|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161116|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	BC012670|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AF035207|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr10_+_126703317_126703496	0.00297113	HOX{A6,A7,B6,B7}.p2	NM_001190453|Dctn2|69654|dynactin 2	NM_001190454|Dctn2|69654|dynactin 2	NM_027151|Dctn2|69654|dynactin 2	AK081785|Dctn2|69654|dynactin 2	AK054390|Dctn2|69654|dynactin 2	AK164021|Dctn2|69654|dynactin 2	AK144464|Dctn2|69654|dynactin 2	AK144505|Dctn2|69654|dynactin 2	BC004613|Dctn2|69654|dynactin 2
mm9_v1_chr18_-_35113995_35113999	0.0029379	HOX{A6,A7,B6,B7}.p2	AK030299|Hspa9|15526|heat shock protein 9	AK145965|Hspa9|15526|heat shock protein 9	AK167856|Hspa9|15526|heat shock protein 9
mm9_v1_chr8_+_112603609_112603709	0.00290852	HOX{A6,A7,B6,B7}.p2	NM_175480|Zfp612|234725|zinc finger protein 612	BC048413|Zfp612|234725|zinc finger protein 612	AK133449|Zfp612|234725|zinc finger protein 612	AK046220|Zfp612|234725|zinc finger protein 612
mm9_v1_chr10_-_80363606_80363713	0.00287934	HOX{A6,A7,B6,B7}.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr2_+_59450080_59450110	0.0028159	HOX{A6,A7,B6,B7}.p2	NM_198294|Tanc1|66860|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm9_v1_chr10_+_84085091_84085181	0.00280277	HOX{A6,A7,B6,B7}.p2	AK039366|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	AK039244|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	BC068143|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	NM_027423|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B
mm9_v1_chr2_+_138082383_138082408	0.00276809	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_77796215_77796321	0.00273659	HOX{A6,A7,B6,B7}.p2	AK170155|Phf12|268448|PHD finger protein 12	AK089226|Phf12|268448|PHD finger protein 12	AK010807|Phf12|268448|PHD finger protein 12	AK155354|Phf12|268448|PHD finger protein 12	AK053787|Phf12|268448|PHD finger protein 12	NM_174852|Phf12|268448|PHD finger protein 12
mm9_v1_chr8_+_97296066_97296079	0.00272652	HOX{A6,A7,B6,B7}.p2	NM_009142|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr17_+_85357297_85357373	0.00272595	HOX{A6,A7,B6,B7}.p2	AK050170|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK136077|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	NM_001159496|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	NM_011151|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK160653|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK167176|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK163283|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AJ271836|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AJ271833|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform
mm9_v1_chr8_+_113381876_113381915	0.00270347	HOX{A6,A7,B6,B7}.p2	AK193863|Cog4|102339|component of oligomeric golgi complex 4
mm9_v1_chr15_-_36426471_36426537	0.00264021	HOX{A6,A7,B6,B7}.p2	AK088304|Ankrd46|68839|ankyrin repeat domain 46	AK148049|Ankrd46|68839|ankyrin repeat domain 46	BC094595|Ankrd46|68839|ankyrin repeat domain 46	BC086659|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr9_-_44688946_44689136	0.00262042	HOX{A6,A7,B6,B7}.p2	AK145484|Mll1|214162|myeloid/lymphoid or mixed-lineage leukemia 1	L17069|Mll1|214162|myeloid/lymphoid or mixed-lineage leukemia 1
mm9_v1_chr7_+_105805420_105805457	0.00258491	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_96902657_96902728	0.00256045	HOX{A6,A7,B6,B7}.p2	AK005668|Lrrc46|69297|leucine rich repeat containing 46	BC022723|Lrrc46|69297|leucine rich repeat containing 46	NM_027026|Lrrc46|69297|leucine rich repeat containing 46	AK158517|Lrrc46|69297|leucine rich repeat containing 46
mm9_v1_chr11_+_101286405_101286406	0.00253536	HOX{A6,A7,B6,B7}.p2	AK157156|Rundc1|217201|RUN domain containing 1
mm9_v1_chr9_+_120213190_120213236	0.00250978	HOX{A6,A7,B6,B7}.p2	AK083225|Myrip|245049|myosin VIIA and Rab interacting protein	NM_144557|Myrip|245049|myosin VIIA and Rab interacting protein	AK038988|Myrip|245049|myosin VIIA and Rab interacting protein
mm9_v1_chr8_-_74061134_74061382	0.00246231	HOX{A6,A7,B6,B7}.p2	AK009361|Bst2|69550|bone marrow stromal cell antigen 2	AK154399|Bst2|69550|bone marrow stromal cell antigen 2	BC087949|Bst2|69550|bone marrow stromal cell antigen 2	BC056638|Bst2|69550|bone marrow stromal cell antigen 2	NM_198095|Bst2|69550|bone marrow stromal cell antigen 2
mm9_v1_chr14_+_64055230_64055357	0.00242162	HOX{A6,A7,B6,B7}.p2	NM_177628|Fam167a|219148|family with sequence similarity 167, member A	BC065085|Fam167a|219148|family with sequence similarity 167, member A	BC094561|Fam167a|219148|family with sequence similarity 167, member A
mm9_v1_chrX_+_71550301_71550377	0.00241644	HOX{A6,A7,B6,B7}.p2	NM_010273|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr2_+_120802960_120803034	0.00240277	HOX{A6,A7,B6,B7}.p2	AK046793|Tmem62|96957|transmembrane protein 62
mm9_v1_chr11_+_4086804_4086893	0.00238318	HOX{A6,A7,B6,B7}.p2	AK140872|Tbc1d10a|103724|TBC1 domain family, member 10a	AK220243|Tbc1d10a|103724|TBC1 domain family, member 10a	BC018300|Tbc1d10a|103724|TBC1 domain family, member 10a	NM_134023|Tbc1d10a|103724|TBC1 domain family, member 10a	AK153677|Tbc1d10a|103724|TBC1 domain family, member 10a	BC037230|Tbc1d10a|103724|TBC1 domain family, member 10a
mm9_v1_chr10_-_14264800_14264841	0.002364	HOX{A6,A7,B6,B7}.p2	AB183545|Gpr126|215798|G protein-coupled receptor 126	NM_001002268|Gpr126|215798|G protein-coupled receptor 126
mm9_v1_chr6_+_8899165_8899186	0.00227881	HOX{A6,A7,B6,B7}.p2	AK163438|Nxph1|18231|neurexophilin 1
mm9_v1_chr11_+_101286385_101286400	0.0022432	HOX{A6,A7,B6,B7}.p2	AK086362|Rundc1|217201|RUN domain containing 1	BC119592|Rundc1|217201|RUN domain containing 1	BC119593|Rundc1|217201|RUN domain containing 1	NM_172566|Rundc1|217201|RUN domain containing 1
mm9_v1_chr10_+_127832280_127832285	0.00222722	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_+_113142480_113142625	0.00219768	HOX{A6,A7,B6,B7}.p2	AK084520|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171577|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK031952|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK043319|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK140191|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171883|Vac14|234729|Vac14 homolog (S. cerevisiae)	BC052199|Vac14|234729|Vac14 homolog (S. cerevisiae)	NM_146216|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK046826|Vac14|234729|Vac14 homolog (S. cerevisiae)
mm9_v1_chr3_+_95733480_95733504	0.00211981	HOX{A6,A7,B6,B7}.p2	AB037685|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr6_-_28084368_28084420	0.00209062	HOX{A6,A7,B6,B7}.p2	BC051384|Grm8|14823|glutamate receptor, metabotropic 8	NM_008174|Grm8|14823|glutamate receptor, metabotropic 8	AK038395|Grm8|14823|glutamate receptor, metabotropic 8
mm9_v1_chr15_+_97998282_97998326	0.00208551	HOX{A6,A7,B6,B7}.p2	BC090621|AI836003|239650|expressed sequence AI836003
mm9_v1_chr11_+_82577835_82577869	0.0020648	HOX{A6,A7,B6,B7}.p2	AK008475|Zfp830|66983|zinc finger protein 830	AK132497|Zfp830|66983|zinc finger protein 830	NM_025884|Zfp830|66983|zinc finger protein 830	AK148058|Zfp830|66983|zinc finger protein 830	AK050043|Zfp830|66983|zinc finger protein 830	AK010353|Zfp830|66983|zinc finger protein 830	AK167656|Zfp830|66983|zinc finger protein 830	BC024340|Zfp830|66983|zinc finger protein 830	AK168417|Zfp830|66983|zinc finger protein 830	AK017640|Zfp830|66983|zinc finger protein 830
mm9_v1_chr1_+_44176812_44176851	0.00205057	HOX{A6,A7,B6,B7}.p2	AK047404|Bivm|246229|basic, immunoglobulin-like variable motif containing	NM_144558|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK032375|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK034329|Bivm|246229|basic, immunoglobulin-like variable motif containing
mm9_v1_chr10_-_80170037_80170073	0.00204352	HOX{A6,A7,B6,B7}.p2	AK208513|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr1_-_63223190_63223282	0.00204325	HOX{A6,A7,B6,B7}.p2	BC015300|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK166604|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK078590|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK167705|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK146814|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK036926|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK142711|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	BC006660|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr3_-_59024076_59024180	0.00199462	HOX{A6,A7,B6,B7}.p2	AK014807|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr5_-_66543123_66543228	0.00197767	HOX{A6,A7,B6,B7}.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr4_+_33295965_33295965	0.00195856	HOX{A6,A7,B6,B7}.p2	AK046869|Srsf13b|272009|serine/arginine-rich splicing factor 13B	NM_177774|Srsf13b|272009|serine/arginine-rich splicing factor 13B
mm9_v1_chr14_-_21212709_21212791	0.00192281	HOX{A6,A7,B6,B7}.p2	AK019243|Mrps16|66242|mitochondrial ribosomal protein S16	BC024656|Mrps16|66242|mitochondrial ribosomal protein S16	AK005206|Mrps16|66242|mitochondrial ribosomal protein S16	NM_025440|Mrps16|66242|mitochondrial ribosomal protein S16
mm9_v1_chr19_+_5637712_5637737	0.00191449	HOX{A6,A7,B6,B7}.p2	BC003818|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr17_+_34093007_34093064	0.00186023	HOX{A6,A7,B6,B7}.p2	AX775735|Vps52|224705|vacuolar protein sorting 52 (yeast)
mm9_v1_chr1_-_63223345_63223399	0.00183671	HOX{A6,A7,B6,B7}.p2	NM_001160038|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160039|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160040|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_145518|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr1_+_167693876_167693939	0.00183424	HOX{A6,A7,B6,B7}.p2	AK005388|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK010947|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK144101|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AF084524|Creg1|433375|cellular repressor of E1A-stimulated genes 1	BC027426|Creg1|433375|cellular repressor of E1A-stimulated genes 1	NM_011804|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK150006|Creg1|433375|cellular repressor of E1A-stimulated genes 1
mm9_v1_chr15_-_36426538_36426542	0.0018293	HOX{A6,A7,B6,B7}.p2	AB076382|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr18_-_35064624_35064726	0.0017926	HOX{A6,A7,B6,B7}.p2	AK195141|Etf1|225363|eukaryotic translation termination factor 1	AK218551|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr11_-_22760335_22760479	0.00176211	HOX{A6,A7,B6,B7}.p2	BC009075|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	NM_001169114|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
mm9_v1_chr10_+_76038388_76038430	0.00173743	HOX{A6,A7,B6,B7}.p2	NM_080845|Ftcd|14317|formiminotransferase cyclodeaminase	AK165414|Ftcd|14317|formiminotransferase cyclodeaminase	BC024078|Ftcd|14317|formiminotransferase cyclodeaminase	BC010813|Ftcd|14317|formiminotransferase cyclodeaminase
mm9_v1_chr8_+_12984287_12984308	0.00169085	HOX{A6,A7,B6,B7}.p2	AK147252|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr2_-_91864276_91864398	0.00168691	HOX{A6,A7,B6,B7}.p2	AB017614|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	BC016447|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	AK142368|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	NM_011957|Creb3l1|26427|cAMP responsive element binding protein 3-like 1
mm9_v1_chr2_+_84890611_84890701	0.00168589	HOX{A6,A7,B6,B7}.p2	NM_001081260|Tnks1bp1|228140|tankyrase 1 binding protein 1	BC150947|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr7_-_4116102_4116147	0.00168245	HOX{A6,A7,B6,B7}.p2	AF102773|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	AF164119|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	BC006758|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5
mm9_v1_chr7_-_52104448_52104476	0.00160036	HOX{A6,A7,B6,B7}.p2	BC017607|Tbc1d17|233204|TBC1 domain family, member 17	NM_001042655|Tbc1d17|233204|TBC1 domain family, member 17
mm9_v1_chr12_+_31596533_31596706	0.00155763	HOX{A6,A7,B6,B7}.p2	AK141199|Sh3yl1|24057|Sh3 domain YSC-like 1	NM_013709|Sh3yl1|24057|Sh3 domain YSC-like 1	BC110043|Sh3yl1|24057|Sh3 domain YSC-like 1	BC058557|Sh3yl1|24057|Sh3 domain YSC-like 1	BC061488|Sh3yl1|24057|Sh3 domain YSC-like 1	AK080739|Sh3yl1|24057|Sh3 domain YSC-like 1
mm9_v1_chr15_-_93228666_93228789	0.0014973	HOX{A6,A7,B6,B7}.p2	AK042283|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	BC058368|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012852|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	NM_026025|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK170136|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012589|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AB095989|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1
mm9_v1_chr4_-_3501974_3502001	0.00148676	HOX{A6,A7,B6,B7}.p2	AK165916|Tmem68|72098|transmembrane protein 68	AK166237|Tmem68|72098|transmembrane protein 68
mm9_v1_chr11_-_86358252_86358308	0.00142936	HOX{A6,A7,B6,B7}.p2	BC038491|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	BC071244|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK032724|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK085687|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK135716|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK163258|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	NM_001114334|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	NM_028259|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr6_+_71493841_71493983	0.0013975	HOX{A6,A7,B6,B7}.p2	AK083562|Vps24|66700|vacuolar protein sorting 24 (yeast)	NM_025783|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK018611|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK014818|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK016677|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC049964|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK009414|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC027441|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC039759|Vps24|66700|vacuolar protein sorting 24 (yeast)
mm9_v1_chr15_+_52543936_52544030	0.00129771	HOX{A6,A7,B6,B7}.p2	AK146250|Med30|69790|mediator complex subunit 30	AK011104|Med30|69790|mediator complex subunit 30	NM_027212|Med30|69790|mediator complex subunit 30	AK007739|Med30|69790|mediator complex subunit 30	BC020113|Med30|69790|mediator complex subunit 30
mm9_v1_chr19_+_46431369_46431437	0.00128619	HOX{A6,A7,B6,B7}.p2	NM_029186|Tmem180|75146|transmembrane protein 180	AK151797|Tmem180|75146|transmembrane protein 180	AK161305|Tmem180|75146|transmembrane protein 180	BC058746|Tmem180|75146|transmembrane protein 180	AK031554|Tmem180|75146|transmembrane protein 180	BC031169|Tmem180|75146|transmembrane protein 180
mm9_v1_chr18_-_35114004_35114004	0.00128114	HOX{A6,A7,B6,B7}.p2	BC052727|Hspa9|15526|heat shock protein 9	BC057343|Hspa9|15526|heat shock protein 9	NM_010481|Hspa9|15526|heat shock protein 9
mm9_v1_chr10_+_92951804_92951841	0.00125824	HOX{A6,A7,B6,B7}.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr11_-_97883924_97884006	0.0012454	HOX{A6,A7,B6,B7}.p2	BC077713|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	AK155193|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_001159319|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_031173|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_145121|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	AF322905|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit
mm9_v1_chr7_-_147164587_147164653	0.00123653	HOX{A6,A7,B6,B7}.p2	BC025923|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC145460|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC145461|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC145730|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC171930|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	AK164921|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	AK131789|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	NM_001033465|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene
mm9_v1_chr8_+_28233019_28233024	0.00123156	HOX{A6,A7,B6,B7}.p2	AK020642|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr5_+_31829364_31829413	0.00122521	HOX{A6,A7,B6,B7}.p2	AK149108|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	NM_009206|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	AK160250|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	BC072588|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	AK138398|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein
mm9_v1_chr18_+_32091098_32091175	0.00118368	HOX{A6,A7,B6,B7}.p2	NM_144862|Lims2|225341|LIM and senescent cell antigen like domains 2	BC010816|Lims2|225341|LIM and senescent cell antigen like domains 2
mm9_v1_chr11_-_70043222_70043264	0.001161	HOX{A6,A7,B6,B7}.p2	AB011665|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	BC090998|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	AK156733|Bcl6b|12029|B-cell CLL/lymphoma 6, member B
mm9_v1_chr14_-_48188088_48188108	0.001135	HOX{A6,A7,B6,B7}.p2	AK029330|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK029967|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	BC090995|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK054196|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	NM_172599|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)
mm9_v1_chr10_-_60215512_60215513	0.00113062	HOX{A6,A7,B6,B7}.p2	BC137864|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	BC144983|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3
mm9_v1_chr17_+_35400983_35401008	0.00111636	HOX{A6,A7,B6,B7}.p2	J00407|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr4_-_108874844_108874876	0.00108574	HOX{A6,A7,B6,B7}.p2	AK131984|Osbpl9|100273|oxysterol binding protein-like 9	NM_133885|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr9_-_110556645_110556664	0.00107816	HOX{A6,A7,B6,B7}.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr3_+_63100101_63100109	0.00104896	HOX{A6,A7,B6,B7}.p2	AK033824|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr18_+_70728508_70728589	0.00101039	HOX{A6,A7,B6,B7}.p2	AK082825|Mbd2|17191|methyl-CpG binding domain protein 2
mm9_v1_chr11_-_72990492_72990557	0.000997276	HOX{A6,A7,B6,B7}.p2	NM_001168470|Tmem93|66048|transmembrane protein 93	BC022104|Tmem93|66048|transmembrane protein 93	AK002385|Tmem93|66048|transmembrane protein 93	AK012769|Tmem93|66048|transmembrane protein 93	AK003198|Tmem93|66048|transmembrane protein 93	AK004149|Tmem93|66048|transmembrane protein 93	NM_025318|Tmem93|66048|transmembrane protein 93
mm9_v1_chr6_-_122806122_122806175	0.00094825	HOX{A6,A7,B6,B7}.p2	AK154229|C3ar1|12267|complement component 3a receptor 1	NM_009779|C3ar1|12267|complement component 3a receptor 1	AK054017|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr11_-_83943060_83943140	0.000886317	HOX{A6,A7,B6,B7}.p2	AK157938|Tada2a|217031|transcriptional adaptor 2A	BC038821|Tada2a|217031|transcriptional adaptor 2A	NM_172562|Tada2a|217031|transcriptional adaptor 2A	AK142262|Tada2a|217031|transcriptional adaptor 2A
mm9_v1_chr10_+_68996455_68996596	0.000855824	HOX{A6,A7,B6,B7}.p2	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr8_+_24168730_24168785	0.000851329	HOX{A6,A7,B6,B7}.p2	AK147483|Ank1|11733|ankyrin 1, erythroid	NM_031158|Ank1|11733|ankyrin 1, erythroid	X69063|Ank1|11733|ankyrin 1, erythroid	AK147597|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr9_+_44863270_44863299	0.000841484	HOX{A6,A7,B6,B7}.p2	AK041037|Mpzl3|319742|myelin protein zero-like 3	NM_176993|Mpzl3|319742|myelin protein zero-like 3	AK049878|Mpzl3|319742|myelin protein zero-like 3	BC132150|Mpzl3|319742|myelin protein zero-like 3	EF102773|Mpzl3|319742|myelin protein zero-like 3	NM_001093749|Mpzl3|319742|myelin protein zero-like 3
mm9_v1_chr19_-_32786771_32786846	0.000835954	HOX{A6,A7,B6,B7}.p2	BC043051|Atad1|67979|ATPase family, AAA domain containing 1	AK044925|Atad1|67979|ATPase family, AAA domain containing 1	BC029085|Atad1|67979|ATPase family, AAA domain containing 1	NM_026487|Atad1|67979|ATPase family, AAA domain containing 1	AK014967|Atad1|67979|ATPase family, AAA domain containing 1	AK030719|Atad1|67979|ATPase family, AAA domain containing 1	AK150469|Atad1|67979|ATPase family, AAA domain containing 1	AK152059|Atad1|67979|ATPase family, AAA domain containing 1	AK033639|Atad1|67979|ATPase family, AAA domain containing 1	AK165953|Atad1|67979|ATPase family, AAA domain containing 1	AK075685|Atad1|67979|ATPase family, AAA domain containing 1
mm9_v1_chr1_-_162964371_162964389	0.000826804	HOX{A6,A7,B6,B7}.p2	BC113763|Zbtb37|240869|zinc finger and BTB domain containing 37	AK084871|Zbtb37|240869|zinc finger and BTB domain containing 37	NM_173424|Zbtb37|240869|zinc finger and BTB domain containing 37
mm9_v1_chr10_+_55834925_55834944	0.000785255	HOX{A6,A7,B6,B7}.p2	BC013191|Msl3l2|73390|male-specific lethal 3-like 2 (Drosophila)
mm9_v1_chr2_-_120796395_120796492	0.000782173	HOX{A6,A7,B6,B7}.p2	AF061555|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1	NM_009461|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr8_+_97296110_97296164	0.000765922	HOX{A6,A7,B6,B7}.p2	BC054838|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC057891|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC006650|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK040220|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AF010586|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	U92565|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr8_+_32260775_32260840	0.000724762	HOX{A6,A7,B6,B7}.p2	AK045392|BC019943|234138|cDNA sequence BC019943	NM_001112729|BC019943|234138|cDNA sequence BC019943	NM_144927|BC019943|234138|cDNA sequence BC019943	AK084242|BC019943|234138|cDNA sequence BC019943	AK046031|BC019943|234138|cDNA sequence BC019943	AK139425|BC019943|234138|cDNA sequence BC019943
mm9_v1_chr5_+_138526303_138526341	0.000723628	HOX{A6,A7,B6,B7}.p2	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr2_-_152169650_152169795	0.000710914	HOX{A6,A7,B6,B7}.p2	AK146421|Trib3|228775|tribbles homolog 3 (Drosophila)	AK089931|Trib3|228775|tribbles homolog 3 (Drosophila)	AK144752|Trib3|228775|tribbles homolog 3 (Drosophila)	AJ514260|Trib3|228775|tribbles homolog 3 (Drosophila)	AK146340|Trib3|228775|tribbles homolog 3 (Drosophila)	AK132257|Trib3|228775|tribbles homolog 3 (Drosophila)	AK159760|Trib3|228775|tribbles homolog 3 (Drosophila)	AF358868|Trib3|228775|tribbles homolog 3 (Drosophila)	BC012955|Trib3|228775|tribbles homolog 3 (Drosophila)	AK160099|Trib3|228775|tribbles homolog 3 (Drosophila)	NM_175093|Trib3|228775|tribbles homolog 3 (Drosophila)
mm9_v1_chr10_-_83996516_83996534	0.000709705	HOX{A6,A7,B6,B7}.p2	AK030708|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr1_+_90303576_90303673	0.000704015	HOX{A6,A7,B6,B7}.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr19_-_41459518_41459628	0.000684295	HOX{A6,A7,B6,B7}.p2	BC113141|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AF293806|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	NM_031376|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK087295|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK154326|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK171021|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170130|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170925|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK089785|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1
mm9_v1_chr17_+_72119030_72119041	0.000674649	HOX{A6,A7,B6,B7}.p2	AK029962|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	NM_175378|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK018895|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK075758|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK161301|Clip4|78785|CAP-GLY domain containing linker protein family, member 4
mm9_v1_chr11_-_45768992_45769003	0.000603461	HOX{A6,A7,B6,B7}.p2	BC115560|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC115561|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK010876|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_001080969|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr12_+_113858217_113858317	0.000549469	HOX{A6,A7,B6,B7}.p2	AK146907|Adssl1|11565|adenylosuccinate synthetase like 1	NM_007421|Adssl1|11565|adenylosuccinate synthetase like 1	AK089520|Adssl1|11565|adenylosuccinate synthetase like 1	AK149634|Adssl1|11565|adenylosuccinate synthetase like 1	AK150874|Adssl1|11565|adenylosuccinate synthetase like 1	M74495|Adssl1|11565|adenylosuccinate synthetase like 1	BC039943|Adssl1|11565|adenylosuccinate synthetase like 1
mm9_v1_chr17_-_24300592_24300754	0.000518583	HOX{A6,A7,B6,B7}.p2	AK168432|Amdhd2|245847|amidohydrolase domain containing 2	AK078259|Amdhd2|245847|amidohydrolase domain containing 2	AK077584|Amdhd2|245847|amidohydrolase domain containing 2	AK159860|Amdhd2|245847|amidohydrolase domain containing 2	AK090009|Amdhd2|245847|amidohydrolase domain containing 2	AK154209|Amdhd2|245847|amidohydrolase domain containing 2	NM_172935|Amdhd2|245847|amidohydrolase domain containing 2
mm9_v1_chr19_+_42056244_42056262	0.000461075	HOX{A6,A7,B6,B7}.p2	NM_145500|Ubtd1|226122|ubiquitin domain containing 1	AK078479|Ubtd1|226122|ubiquitin domain containing 1
mm9_v1_chr2_-_155479292_155479385	0.000458964	HOX{A6,A7,B6,B7}.p2	BC003931|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein
mm9_v1_chr11_-_69373707_69373738	0.000428482	HOX{A6,A7,B6,B7}.p2	NM_007911|Efnb3|13643|ephrin B3
mm9_v1_chr14_+_58693951_58693999	0.000403905	HOX{A6,A7,B6,B7}.p2	AK158584|Fgf9|14180|fibroblast growth factor 9
mm9_v1_chrX_-_48559008_48559019	0.000373785	HOX{A6,A7,B6,B7}.p2	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chr3_+_80841086_80841191	0.000323919	HOX{A6,A7,B6,B7}.p2	AK052947|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC029099|Pdgfc|54635|platelet-derived growth factor, C polypeptide	AF117608|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC037696|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr11_-_89864036_89864209	0.000292073	HOX{A6,A7,B6,B7}.p2	Z50024|Pctp|18559|phosphatidylcholine transfer protein	BC053478|Pctp|18559|phosphatidylcholine transfer protein	BC071234|Pctp|18559|phosphatidylcholine transfer protein	AF151639|Pctp|18559|phosphatidylcholine transfer protein	NM_008796|Pctp|18559|phosphatidylcholine transfer protein
mm9_v1_chr19_+_59017874_59017915	0.000274993	HOX{A6,A7,B6,B7}.p2	NM_178689|Eno4|226265|enolase 4	AK032395|Eno4|226265|enolase 4
mm9_v1_chr11_-_116167956_116168087	0.000212157	HOX{A6,A7,B6,B7}.p2	AF014461|Exoc7|53413|exocyst complex component 7	AK140450|Exoc7|53413|exocyst complex component 7	BC053710|Exoc7|53413|exocyst complex component 7	BC028927|Exoc7|53413|exocyst complex component 7	AK167769|Exoc7|53413|exocyst complex component 7	AK162868|Exoc7|53413|exocyst complex component 7	AK169928|Exoc7|53413|exocyst complex component 7	AK087601|Exoc7|53413|exocyst complex component 7	NM_001162872|Exoc7|53413|exocyst complex component 7	NM_016857|Exoc7|53413|exocyst complex component 7
mm9_v1_chr2_+_91297678_91297857	0.00017285	HOX{A6,A7,B6,B7}.p2	NM_001145857|Lrp4|228357|low density lipoprotein receptor-related protein 4	NM_172668|Lrp4|228357|low density lipoprotein receptor-related protein 4	BC132240|Lrp4|228357|low density lipoprotein receptor-related protein 4	AF247637|Lrp4|228357|low density lipoprotein receptor-related protein 4
mm9_v1_chr5_-_115608123_115608152	0.000163197	HOX{A6,A7,B6,B7}.p2	BC058245|Mlec|109154|malectin	BC035300|Mlec|109154|malectin
mm9_v1_chr2_-_120229789_120229851	0.000125443	HOX{A6,A7,B6,B7}.p2	AK086738|Tmem87a|211499|transmembrane protein 87A	BC004047|Tmem87a|211499|transmembrane protein 87A	AK044591|Tmem87a|211499|transmembrane protein 87A	AK134268|Tmem87a|211499|transmembrane protein 87A	AK137137|Tmem87a|211499|transmembrane protein 87A	BC027354|Tmem87a|211499|transmembrane protein 87A	AK088559|Tmem87a|211499|transmembrane protein 87A	NM_001110496|Tmem87a|211499|transmembrane protein 87A	NM_001110497|Tmem87a|211499|transmembrane protein 87A	NM_173734|Tmem87a|211499|transmembrane protein 87A
mm9_v1_chr12_-_88784769_88784966	9.1477e-05	HOX{A6,A7,B6,B7}.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr16_+_87354429_87354497	8.55532e-05	HOX{A6,A7,B6,B7}.p2	AY456393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_001159331|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_026366|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116394|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK160298|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK145617|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC098330|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK012019|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AY536887|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm9_v1_chr8_-_71708077_71708126	8.22793e-05	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr17_-_29374656_29374735	5.38078e-05	HOX{A6,A7,B6,B7}.p2	AK147529|Cpne5|240058|copine V	AK044042|Cpne5|240058|copine V	NM_153166|Cpne5|240058|copine V	BC036971|Cpne5|240058|copine V
mm9_v1_chr6_+_17587046_17587119	3.80757e-05	HOX{A6,A7,B6,B7}.p2	AK150587|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	BC082589|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	NM_007604|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK007550|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AY544984|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK008204|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr5_-_77738960_77739110	1.73828e-06	HOX{A6,A7,B6,B7}.p2	AK139955|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK172681|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AB041537|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK017793|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK128920|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	BC017154|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK163935|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK019975|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK011533|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK157246|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	NM_019836|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene
